GAUSSIAN PRINCIPLE COMPONENTS FOR NONLOCAL MEANS IMAGE DENOISING

NonLocal Means(NLM),taking fully advantage of image redundancy,has been proved to be very effective in noise removal.However,high computational load limits its wide application.Based on Principle Component Analysis(PCA),Principle Neighborhood Dictionary(PND) was proposed to reduce the computational load of NLM.Nevertheless,as the principle components in PND method are computed directly from noisy image neighborhoods,they are prone to be inaccurate due to the presence of noise.In this paper,an improved scheme for image denoising is proposed.This scheme is based on PND and uses preprocessing via Gaussian filter to eliminate the influence of noise.PCA is then used to project those filtered image neighborhood vectors onto a lower-dimensional space.With the preproc-essing process,the principle components computed are more accurate resulting in an improved de-noising performance.A comparison with some NLM based and state-of-art denoising methods shows that the proposed method performs well in terms of Peak Signal to Noise Ratio(PSNR) as well as image visual fidelity.The experimental results demonstrate that our method outperforms existing methods both subjectively and objectively.

RELATIVE PRINCIPLE COMPONENT AND RELATIVE PRINCIPLE COMPONENT ANALYSIS ALGORITHM

In this letter,the new concept of Relative Principle Component (RPC) and method of RPC Analysis (RPCA) are put forward. Meanwhile,the concepts such as Relative Transform (RT),Ro-tundity Scatter (RS) and so on are introduced. This new method can overcome some disadvantages of the classical Principle Component Analysis (PCA) when data are rotundity scatter. The RPC selected by RPCA are more representative,and their significance of geometry is more notable,so that the application of the new algorithm will be very extensive. The performance and effectiveness are simply demonstrated by the geometrical interpretation proposed.

Locally linear embedding-based seismic attribute extraction and applications

How to extract optimal composite attributes from a variety of conventional seismic attributes to detect reservoir features is a reservoir predication key,which is usually solved by reducing dimensionality.Principle component analysis（PCA） is the most widely-used linear dimensionality reduction method at present.However,the relationships between seismic attributes and reservoir features are non-linear,so seismic attribute dimensionality reduction based on linear transforms can＇t solve non-linear problems well,reducing reservoir prediction precision.As a new non-linear learning method,manifold learning supplies a new method for seismic attribute analysis.It can discover the intrinsic features and rules hidden in the data by computing low-dimensional,neighborhood-preserving embeddings of high-dimensional inputs.In this paper,we try to extract seismic attributes using locally linear embedding（LLE）,realizing inter-horizon attributes dimensionality reduction of 3D seismic data first and discuss the optimization of its key parameters.Combining model analysis and case studies,we compare the dimensionality reduction and clustering effects of LLE and PCA,both of which indicate that LLE can retain the intrinsic structure of the inputs.The composite attributes and clustering results based on LLE better characterize the distribution of sedimentary facies,reservoir,and even reservoir fluids.

Inorganic Elements in Kernel of Amygdalus communis L. Measured Using ICP-OES Method

[Objective] The aim was to study on distribution of inorganic elements in kernel of Amygdalus communis L., providing reference for quality evaluation of A. communis L. species. [Method] Totally 26 species of inorganic elements in kernel, including Al, B, Be, Ca, Co, Cu, Fe, Mg, Mn, Mo, Na, Ni, P, Pb, Si, Sn, Sr, Ti, Zn, Cd, As, Se, V, Hg, Cr and K were measured with inductively coupled plasma emission spectrum （ICP-OES） and principal components analysis （PCA）. [Result] A. communis L. of different species and in different factories showed a similar curve in content of inorganic elements; absolute contents of the elements differed significantly. In addition, the accumulated variance contribution of five principle factors achieved as high as 84.371% and the variance contribution made by the first three factors accounted for 67.546%, proving that Fe, Ti, Pb, Na, Se, Cu, Mo, K, Zn, Ni, Ca and Sr were characteristic elements. [Conclusion] The method, which is brief, rapid and accurate, can be used for determination of inorganic elements in kernel of A. communis L., providing theoretical references for further development and utilization of A. communis L.

Online Supervision of Penicillin Cultivations Based on Rolling MPCA

To reduce the variations of the production process in penicillin cultivations, a rolling multivariate statis-tical approach based on multiway principle component analysis (MPCA) is developed and used for fault diagnosis of penicillin cultivations. Using the moving data windows technique, the static MPCA is extended for use in dy-namic process performance monitoring. The control chart is set up using the historical data collected from the past successful batches, thereby resulting in simplification of monitoring charts, easy tracking of the progress in each batch run, and monitoring the occurrence of the observable upsets. Data from the commercial-scale penicillin fer-mentation process are used to develop the rolling model. Using this method, faults are detected in real time and the corresponding measurements of these faults are directly made through inspection of a few simple plots (t-chart, SPE-chart, and T2-chart). Thus, the present methodology allows the process operator to actively monitor the data from several cultivations simultaneously.

Automatic Visual Leakage Detection and Localization from Pipelines in Chemical Process Plants Using Machine Vision Techniques

Liquid leakage from pipelines is a critical issue in large-scale process plants.Damage in pipelines affects the normal operation of the plant and increases maintenance costs.Furthermore,it causes unsafe and hazardous situations for operators.Therefore,the detection and localization of leakages is a crucial task for maintenance and condition monitoring.Recently,the use of infrared(IR)cameras was found to be a promising approach for leakage detection in large-scale plants.IR cameras can capture leaking liquid if it has a higher(or lower)temperature than its surroundings.In this paper,a method based on IR video data and machine vision techniques is proposed to detect and localize liquid leakages in a chemical process plant.Since the proposed method is a vision-based method and does not consider the physical properties of the leaking liquid,it is applicable for any type of liquid leakage(i.e.,water,oil,etc.).In this method,subsequent frames are subtracted and divided into blocks.Then,principle component analysis is performed in each block to extract features from the blocks.All subtracted frames within the blocks are individually transferred to feature vectors,which are used as a basis for classifying the blocks.The k-nearest neighbor algorithm is used to classify the blocks as normal(without leakage)or anomalous(with leakage).Finally,the positions of the leakages are determined in each anomalous block.In order to evaluate the approach,two datasets with two different formats,consisting of video footage of a laboratory demonstrator plant captured by an IR camera,are considered.The results show that the proposed method is a promising approach to detect and localize leakages from pipelines using IR videos.The proposed method has high accuracy and a reasonable detection time for leakage detection.The possibility of extending the proposed method to a real industrial plant and the limitations of this method are discussed at the end.

Relationship between land cover and monsoon interannual variations in east Asia

Asian monsoon have multiple forms of variations such as seasonal variation, intra-seasonal variation, interannual variation, etc. The interannual variations have not only yearly variations but also variations among several years. In general, the yearly variations are described with winter temperature and summer precipitation, and the variations among several years are reflected by circulation of ENSO events. In this study, at first, we analyze the relationship between land cover and interannual monsoon variations represented by precipitation changes using Singular Value Decomposition method based on the time series precipitation data and 8km NOAA AVHRR NDVI data covering 1982 to 1993 in east Asia. Furthermore, after confirmation and reclassification of ENSO events which are recognized as the strong signal of several year monsoon variation, using the same time series NDVI data during 1982 to 1993 in east Asia, we make a Principle Component Analysis and analyzed the correlation of the 7th component eigenvectors and Southern Oscillation Index (SOI) that indicates the characteristic of ENSO events, and summed up the temporal-spatial distribution features of east Asian land cover’s inter-annual variations that are being driven by changes of ENSO events.

Microbial community dynamics during composting of animal manures contaminated with arsenic,copper,and oxytetracycline

Effects of the heavy metal copper(Cu), the metalloid arsenic(As), and the antibiotic oxytetracycline(OTC) on bacterial community structure and diversity during cow and pig manure composting were investigated. Eight treatments were applied, four to each manure type, namely cow manure with:(1) no additives(control),(2) addition of heavy metal and metalloid,(3) addition of OTC and(4) addition of OTC with heavy metal and metalloid;and pig manure with:(5) no additives(control),(6) addition of heavy metal and metalloid,(7) addition of OTC and(8) addition of OTC with heavy metal and metalloid. After 35 days of composting, according to the alpha diversity indices, the combination treatment(OTC with heavy metal and metalloid) in pig manure was less harmful to microbial diversity than the control or heavy metal and metalloid treatments. In cow manure, the treatment with heavy metal and metalloid was the most harmful to the microbial community, followed by the combination and OTC treatments. The OTC and combination treatments had negative effects on the relative abundance of microbes in cow manure composts. The dominant phyla in both manure composts included Actinobacteria, Bacteroidetes, Firmicutes, and Proteobacteria. The microbial diversity relative abundance transformation was dependent on the composting time. Redundancy analysis(RDA) revealed that environmental parameters had the most influence on the bacterial communities. In conclusion, the composting process is the most sustainable technology for reducing heavy metal and metalloid impacts and antibiotic contamination in cow and pig manure. The physicochemical property variations in the manures had a significant effect on the microbial community during the composting process. This study provides an improved understanding of bacterial community composition and its changes during the composting process.

Retrieve Sea Surface Salinity Using Principal Component Regression Model Based on SMOS Satellite Data

The sea surface salinity(SSS) is a key parameter in monitoring ocean states. Observing SSS can promote the understanding of global water cycle. This paper provides a new approach for retrieving sea surface salinity from Soil Moisture and Ocean Salinity(SMOS) satellite data. Based on the principal component regression(PCR) model, SSS can also be retrieved from the brightness temperature data of SMOS L2 measurements and Auxiliary data. 26 pair matchup data is used in model validation for the South China Sea(in the area of 4?–25?N, 105?–125?E). The RMSE value of PCR model retrieved SSS reaches 0.37 psu(practical salinity units) and the RMSE of SMOS SSS1 is 1.65 psu when compared with in-situ SSS. The corresponding Argo daily salinity data during April to June 2013 is also used in our validation with RMSE value 0.46 psu compared to 1.82 psu for daily averaged SMOS L2 products. This indicates that the PCR model is valid and may provide us with a good approach for retrieving SSS from SMOS satellite data.

Measurement of lumber moisture content based on PCA and GSSVM

Lumber moisture content(LMC) is the important parameter to judge the dryness of lumber and the quality of wooden products.Nevertheless the data acquired are mostly redundant and incomplete because of the complexity of the course of drying,by interference factors that exist in the dryness environment and by the physical characteristics of the lumber itself.To improve the measuring accuracy and reliability of LMC,the optimal support vector machine(SVM) algorithm was put forward for regression analysis LMC.Environmental factors such as air temperature and relative humidity were considered,the data of which were extracted with the principle component analysis method.The regression and prediction of SVM was optimized based on the grid search(GS) technique.Groups of data were sampled and analyzed,and simulation comparison of forecasting performance shows that the main component data were extracted to speed up the convergence rate of the optimum algorithm.The GS-SVM shows a better performance in solving the LMC measuring and forecasting problem.

Risk based security assessment of power system using generalized regression neural network with feature extraction

A comprehensive risk based security assessment which includes low voltage, line overload and voltage collapse was presented using a relatively new neural network technique called as the generalized regression neural network (GRNN) with incorporation of feature extraction method using principle component analysis. In the risk based security assessment formulation, the failure rate associated to weather condition of each line was used to compute the probability of line outage for a given weather condition and the extent of security violation was represented by a severity function. For low voltage and line overload, continuous severity function was considered due to its ability to zoom in into the effect of near violating contingency. New severity function for voltage collapse using the voltage collapse prediction index was proposed. To reduce the computational burden, a new contingency screening method was proposed using the risk factor so as to select the critical line outages. The risk based security assessment method using GRNN was implemented on a large scale 87-bus power system and the results show that the risk prediction results obtained using GRNN with the incorporation of principal component analysis give better performance in terms of accuracy.

Multimodal Medical Image Registration and Fusion for Quality Enhancement

For the last two decades,physicians and clinical experts have used a single imaging modality to identify the normal and abnormal structure of the human body.However,most of the time,medical experts are unable to accurately analyze and examine the information from a single imaging modality due to the limited information.To overcome this problem,a multimodal approach is adopted to increase the qualitative and quantitative medical information which helps the doctors to easily diagnose diseases in their early stages.In the proposed method,a Multi-resolution Rigid Registration(MRR)technique is used for multimodal image registration while Discrete Wavelet Transform(DWT)along with Principal Component Averaging(PCAv)is utilized for image fusion.The proposed MRR method provides more accurate results as compared with Single Rigid Registration(SRR),while the proposed DWT-PCAv fusion process adds-on more constructive information with less computational time.The proposed method is tested on CT and MRI brain imaging modalities of the HARVARD dataset.The fusion results of the proposed method are compared with the existing fusion techniques.The quality assessment metrics such as Mutual Information(MI),Normalize Crosscorrelation(NCC)and Feature Mutual Information(FMI)are computed for statistical comparison of the proposed method.The proposed methodology provides more accurate results,better image quality and valuable information for medical diagnoses.

Genetic background analysis and breed evaluation of Yiling yellow cattle

Traditionally, Chinese indigenous cattle is geographically widespread. The present study analyzed based on genome-wide variants to evaluate the genetic background among 157 individuals from four representative indigenous cattle breeds of Hubei Province of China： Yiling yellow cattle （YL）, Bashan cattle （BS）, Wuling cattle （WL）, Zaobei cattle （ZB）, and 21 indi- viduals of Qinchuan cattle （QC） from the nearby Shanxi Province of China. Linkage disequilibrium （LD） analysis showed the LD of YL was the lowest （~=0.32） when the distance between markers was approximately 2 kb. Principle component analysis （PCA）, and neighbor-joining （NJ）-tree revealed a separation of Yiling yellow cattle from other geographic nearby local cattle breeds. In PCA plot, the YL and QC groups were segregated as expected; moreover, YL individuals clustered together more obviously. In the N J-tree, the YL group formed an independent branch and BS, WL, ZB groups were mixed. We then used the FST statistic approach to reveal long-term selection sweep of YL and other 4 cattle breeds. According to the selective sweep, we identified the unique pathways of YL, associated with production traits. Based on the results, it can be proposed that YL has its unique genetic characteristics of excellence resource, and it is an indispensable cattle breed in China.

Pathological Voice Classification Based on Features Dimension Opti mization

The classification of pathological voice from healthy voice was studied based upon 27 acoustic features derived from a single sound signal of vowel /a:/. First, the feature space was transferred to reduce the data dimension by principle component analysis (PCA). Then the voice samples were classified according to the reduced PCA parameters by support vector machine (SVM) using radial basis function (RBF) as a kernel function. Meanwhile, by changing the ratio of opposite class samples, the accuracy under different features combinations was tested. Experimental data were provided by the voice database of Massachusetts Eye and Ear Infirmary (MEEI) in which 216 vowel /a:/ samples were collected from subjects of healthy and pathological cases, and tested with 5 fold cross-validation method. The result shows the positive rate of pathological voices was improved from 92% to 98% through the PCA method. STD, Fatr, Tasm, NHR, SEG, and PER are pathology sensitive features in illness detection. Using these sensitive features the accuracy of detection of pathological voice from healthy voice can reach 97%.

Data-Driven Temporal Filtering on Teager Energy Time Trajectory for Robust Speech Recognition

Data-driven temporal filtering technique is integrated into the time trajectory of Teager energy operation （TEO） based feature parameter for improving the robustness of speech recognition system against noise. Three kinds of data-driven temporal filters are investigated for the motivation of alleviating the harmful effects that the environmental factors have on the speech. The filters include： principle component analysis （PCA） based filters, linear discriminant analysis （LDA） based filters and minimum classification error （MCE） based filters. Detailed comparative analysis among these temporal filtering approaches applied in Teager energy domain is presented. It is shown that while all of them can improve the recognition performance of the original TEO based feature parameter in adverse environment, MCE based temporal filtering can provide the lowest error rate as SNR decreases than any other algorithms.

Improvement of tissue analysis and classification using optical coherence tomography combined with Raman spectroscopy

Optical coherence tomography(OCT)provides significant advantages of high resolution(approaching the histopathology level)realtime imaging of tsess without use of contrast agents.Based on these advantages,the microstructural features of tumors can be visualized and detected intra-operatively.However,it is still not clinically accepted for tumor margin delin-eation due to poor specificity and accuracy.In contrast,Raman spectroscopy(RS)can obtain tissue information at the molecular level,but does not provide real-time inaging capability.Therefore,combining OCT and RS could provide synergy.To this end,we present a tissue analysis and dassification method using both the slope of OCT intensity signal Vs depth and the principle components from the RS spectrum as the indicators for tissuse characterization.The goal of this study was to understand prediction accuracy of OCT and combined OCT/RS method for dassification of optically similar tisues and organs.Our pilot experiments were performed on mouse kidneys,livers,and small intestines(SIs).The prediction accuracy with five-fold cross validation of the method has been evaluated by the support vector machine(SVM)method.The results demonstrate that tissue characterization based on the OCT/RS method was superior compared to using OCT structural information alone.This combined OCT/RS method is potentially useful as a noninvasive optical biopsy technique for rapid and automatic tissue characterization during surgery.

Comprehensive Evaluation and Prediction of the Effectiveness of H_(2)O_(2)- assisted Na_(2)CO_(3)Pretreatment of Corn Stover Using Multivariate Analysis

In this study,multivariate analysis methods,including a principal component analysis(PCA)and partial least square(PLS)analysis,were applied to reveal the inner relationship of the key variables in the process of H_(2)O_(2)-assisted Na_(2)CO_(3)(HSC)pretreatment of corn stover.A total of 120 pretreatment experiments were implemented at the lab scale under different conditions by varying the particle size of the corn stover and process variables.The results showed that the Na_(2)CO_(3) dosage and pretreatment temperature had a strong influence on lignin removal,whereas pulp refining instrument(PFI)refining and Na_(2)CO_(3) dosage played positive roles in the final total sugar yield.Furthermore,it was found that pretreatment conditions had a more significant impact on the amelioration of pretreatment effectiveness compared with the properties of raw corn stover.In addition,a prediction of the effectiveness of the corn stover HSC pretreatment based on a PLS analysis was conducted for the first time,and the test results of the predictability based on additional pretreatment experiments proved that the developed PLS model achieved a good predictive performance(particularly for the final total sugar yield),indicating that the developed PLS model can be used to predict the effectiveness of HSC pretreatment.Therefore,multivariate analysis can be potentially used to monitor and control the pretreatment process in future large-scale biorefinery applications.

Spatial and Temporal Variation of the Hydrological Parameters in the Wouri-Nkam Section of the Cameroon Estuary, Central African Atlantic Coast

This study aimed to provide relevant knowledge about the dynamics of the hydrological parameters in the river-estuary continuum of the Wouri-Nkam river estuary for a sustainable management program. The hydrological parameters were recorded in eleven stations spanned out on the basis of population density and human activities. Water quality parameters (Temperature, salinity, dissolved oxygen, pH, Total dissolved solutes, Redox potential and conductivity) were collected in subsurface water using a multiple parameter. Surface currents and morphometric (depth and width) parameters were recorded using a drifter, sonar depth and GPS. The field measurements took placed between 18/05/2019 to 08/09/2020 and were divided into six (06) cruises. The data were later subjected to an analysis of variance (ANOVA) and Principle Component Analysis using XLSTAT 2017 (2.7 version) software. Results obtained revealed that, the water quality parameters were spatially more stable notsignficant at (df = 9, p < 0.05) with a relatively low temperature (25.5°C - 27°C) during the wet period. The limit of the frontal zone extended to S5 (Bonalokan, 8.25 km from S1) during the snapshot of the dry period, spring phase and flood tide conditions. Inversely, during wet period, this extension reduced to S1 (Bridge) and relatively increases slightly to S3 (Bonangang) during the neap phase and ebb tides of this season. This result revealed a change in the axial gradient of about eight (08) and four (04) kilometers during the seasonal and tidal scales (lunar and diurnal periods) respectively. These changes were also accompanied by changes in the water quality signatures, that may affect the fishery distribution and compositions. However, futures studies to buttress the results of this investigation should focus on longer time series sampling methods and model developments.

Correlation analysis of stem hardness traits with fiber and yield-related traits in core collections of Gossypium hirsutum

Background:Stem hardness is one of the major influencing factors for plant architecture in upland cotton(Gossypium hirsutum L.).Evaluating hardness phenotypic traits is very important for the selection of elite lines for resistance to lodging in Gossypium hirsutum L.Cotton breeders are interested in using diverse genotypes to enhance fiber quality and high-yield.Few pieces of research for hardness and its relationship with fiber quality and yield were found.This study was designed to find the relationship of stem hardness traits with fiber quality and yield contributing traits of upland cotton.Results:Experiments were carried out to measure the bending,acupuncture,and compression properties of the stem from a collection of upland cotton genotypes,comprising 237 accessions.The results showed that the genotypic difference in stem hardness was highly significant among the genotypes,and the stem hardness traits(BL,BU,AL,AU,CL,and CU)have a positive association with fiber quality traits and yield-related traits.Statistical analyses of the results showed that in descriptive statistics result bending(BL,BU)has a maximum coefficient of variance,but fiber length and fiber strength have less coefficient of variance among the genotypes.Principal component analysis(PCA)trimmed quantitative characters into nine principal components.The first nine principal components(PC)with Eigenvalues>1 explained 86%of the variation among 237 accessions of cotton.Both 2017 and 2018,PCA results indicated that BL,BU,FL,FE,and LI contributed to their variability in PC1,and BU,AU,CU,FD,LP,and FWPB have shown their variability in PC2.Conclusion:We describe here the systematic study of the mechanism involved in the regulation of enhancing fiber quality and yield by stem bending strength,acupuncture,and compression properties of G.hirsutum.

Robust Principal Component Test in Gross Error Detection and Identification

Principle component analysis （PCA） based chi-square test is more sensitive to subtle gross errors and has greater power to correctly detect gross errors than classical chi-square test. However, classical principal com- ponent test （PCT） is non-robust and can be very sensitive to one or more outliers. In this paper, a Huber function liked robust weight factor was added in the collective chi-square test to eliminate the influence of gross errors on the PCT. Meanwhile, robust chi-square test was applied to modified simultaneous estimation of gross error （MSEGE） strategy to detect and identify multiple gross errors. Simulation results show that the proposed robust test can reduce the possibility of type Ⅱ errors effectively. Adding robust chi-square test into MSEGE does not obviously improve the power of multiple gross error identification, the proposed approach considers the influence of outliers on hypothesis statistic test and is more reasonable.