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New insights into ATR inhibition in muscle invasive bladder cancer:The role of apolipoprotein B mRNA editing catalytic subunit 3B
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作者 HYUNHO KIM UIJU CHO +5 位作者 SOOK HEE HONG HYUNG SOON PARK IN-HO KIM HO JUNG AN BYOUNG YONG SHIM JIN HYOUNG KANG 《Oncology Research》 SCIE 2024年第6期1021-1030,共10页
Background:Apolipoprotein B mRNA editing catalytic polypeptide(APOBEC),an endogenous mutator,induces DNA damage and activates the ataxia telangiectasia and Rad3-related(ATR)-checkpoint kinase 1(Chk1)pathway.Although c... Background:Apolipoprotein B mRNA editing catalytic polypeptide(APOBEC),an endogenous mutator,induces DNA damage and activates the ataxia telangiectasia and Rad3-related(ATR)-checkpoint kinase 1(Chk1)pathway.Although cisplatin-based therapy is the mainstay for muscle-invasive bladder cancer(MIBC),it has a poor survival rate.Therefore,this study aimed to evaluate the efficacy of an ATR inhibitor combined with cisplatin in the treatment of APOBEC catalytic subunit 3B(APOBEC3B)expressing MIBC.Methods:Immunohistochemical staining was performed to analyze an association between APOBEC3B and ATR in patients with MIBC.The APOBEC3B expression in MIBC cell lines was assessed using real-time polymerase chain reaction and western blot analysis.Western blot analysis was performed to confirm differences in phosphorylated Chk1(pChk1)expression according to the APOBEC3B expression.Cell viability and apoptosis analyses were performed to examine the anti-tumor activity of ATR inhibitors combined with cisplatin.Results:There was a significant association between APOBEC3B and ATR expression in the tumor tissues obtained from patients with MIBC.Cells with higher APOBEC3B expression showed higher pChk1 expression than cells expressing low APOBEC3B levels.Combination treatment of ATR inhibitor and cisplatin inhibited cell growth in MIBC cells with a higher APOBEC3B expression.Compared to cisplatin single treatment,combination treatment induced more apoptotic cell death in the cells with higher APOBEC3B expression.Conclusion:Our study shows that APOBEC3B’s higher expression status can enhance the sensitivity of MIBC to cisplatin upon ATR inhibition.This result provides new insight into appropriate patient selection for the effective application of ATR inhibitors in MIBC. 展开更多
关键词 Apolipoprotein B mrna editing catalytic polypeptide(APOBEC) Ataxia telangiectasia and Rad3-related(ATR) Bladder cancer DNA damage response DNA replication stress
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Phosphoinositide-3-kinase,catalytic,alpha polypeptide RNA interference inhibits growth of colon cancer cell SW948 被引量:4
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作者 Wen-Sheng Huang Tian-Bao Wang +3 位作者 Yao He Yu-Jun Chen Shi-Long Zhong Min Tan 《World Journal of Gastroenterology》 SCIE CAS CSCD 2012年第26期3458-3464,共7页
AIM:To investigate the gene knock-down effect by the phosphoinositide-3-kinase,catalytic,alpha polypeptide(PIK3CA)-targeted double-stranded RNA(dsRNA) and its effect on cell proliferation and cycle distribution in SW9... AIM:To investigate the gene knock-down effect by the phosphoinositide-3-kinase,catalytic,alpha polypeptide(PIK3CA)-targeted double-stranded RNA(dsRNA) and its effect on cell proliferation and cycle distribution in SW948.METHODS:Two PIK3CA-targeted dsRNAs were constructed and transfected into SW948 cells.Transfections were performed using lipofectamine TM 2000.The transfection effectiveness was calculated basing on the rate of fluorescence cell of SW948 at 6 h after transfection.Total messenger RNA was extracted from these cells using the RNeasy kit,and semiquantitative reverse transcription polymerase chain reaction was performed to detect the down-regulation of PIK3CA,AKT1,MYC,and CCND1 gene expression.Cells were harvested,proteins were resolved,and western blot was employed to detect the expression levels of PIK3CA,AKT1,MYC,and CCND1 gene.Cell proliferation was assessed by 3-(4,5)-dimethylthiahiazo(-z-y1)-3,5-di-phenytetrazoliumromide assay and the inhibition rate was calculated.Soft agar colony formation assay was performed basing on colonies greater than 60 μm in diameter at ×100 magnification.The effect on cell cycle distribution and apoptosis was assessed by flow cytometry.All experiments were performed in triplicate.RESULTS:Green fluorescence was observed in SW948 cell transfected with plasmid Pgenesil-1,and the transfection effectiveness was about 65%.Forty-eight hours post-transfection,mRNA expression of PIK3CA in SW948 cells was 0.51 ± 0.04 vs 0.49 ± 0.03 vs 0.92 ± 0.01 vs 0.93 ± 0.03(P = 0.001) in Pgenesil-CA1,Pgenesil-CA2,negative and blank group respectively.mRNA expression of AKT1 was 0.50 ± 0.03 vs 0.48 ± 0.01 vs 0.93 ± 0.04 vs 0.92 ± 0.02(P = 0.000) in Pgenesil-CA1,Pgenesil-CA2,negative and blank group respectively.mRNA expression of MYC was 0.49 ± 0.01 vs 0.50 ± 0.04 vs 0.90 ± 0.02 vs 0.91 ± 0.03(P = 0.001) in the four groups respectively.mRNA expression of CCND1 was 0.45 ± 0.02 vs 0.51 ± 0.01 vs 0.96 ± 0.03 vs 0.98 ± 0.01(P = 0.001) in the four groups respectively.The protein level of PIK3CA was 0.53 ± 0.01 vs 0.54 ± 0.02 vs 0.92 ± 0.03 vs 0.91 ± 0.02(P = 0.001) in Pgenesil-CA1,Pgenesil-CA2,negative and blank group respectively.The protein level of AKT1 in the four groups was 0.49 ± 0.02 vs 0.55 ± 0.03 vs 0.94 ± 0.03 vs 0.95 ± 0.04,P = 0.000).The protein level of MYC in the four groups was 0.51 ± 0.03 vs 0.52 ± 0.04 vs 0.92 ± 0.02 vs 0.95 ± 0.01(P = 0.000).The protein level of CCND1 in the four groups was 0.54 ± 0.04 vs 0.56 ± 0.03 vs 0.93 ± 0.01 vs 0.93 ± 0.03(P = 0.000).Both Pgenesil-CA1 and Pgenesil-CA2 plasmids significantly suppressed the growth of SW948 cells when compared with the negative or blank group at 48 h after transfec-tion(29% vs 25% vs 17% vs 14%,P = 0.001),60 h after transfection(38% vs 34% vs 19% vs 16%,P = 0.001),and 72 h after transfection(53% vs 48% vs 20% vs 17%,P = 0.000).Numbers of colonies in negative,blank,CA1,and CA2 groups were 42 ± 4,45 ± 5,8 ± 2,and 10 ± 3,respectively(P = 0.000).There were more than 4.5 times colonies in the blank and negative control groups as there were in the CA1 and CA2 groups.In addition,the colonies in blank and negative control groups were also larger than those in the CA1 and CA2 groups.The percentage of cells in the CA1 and CA2 groups was significantly higher in G 0 /G 1 phase,but lower in S and G 2 /M phase when compared with the negative and control groups.Moreover,cell apoptosis rates in the CA1 and CA2 groups were 5.11 ± 0.32 and 4.73 ± 0.32,which were significantly higher than those in negative(0.95 ± 0.11,P = 0.000) and blank groups(0.86 ± 0.13,P = 0.001).No significant difference was found between CA1 and CA2 groups in cell cycle distribution and apoptosis.CONCLUSION:PIK3CA-targeted short hairpin RNAs can block the phosphoinositide 3-kinase-Akt signaling pathway and inhibit cell growth,increase apoptosis,and induce cell cycle arrest in the PIK3CA-mutant colon cancer SW948 cells. 展开更多
关键词 Phosphoinositide-3-kinase catalytic alphapolypeptide rna interference Colon cancer Phos-phoinositide-3-kinase pathway
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Emerging applications of catalytically inactive CRISPR-Cas13 system in mRNA engineering
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作者 Yan-Hua Chen Qian-Qian Zhou Fu-Wen Yuan 《Biomedical Engineering Communications》 2022年第1期2-7,共6页
Posttranscriptional regulations of different types of RNA,including rRNA,tRNA,mRNA and ncRNA are widely involved in normal physiology and diseases.m RNA,as the intermediary product between gene and protein,whose postt... Posttranscriptional regulations of different types of RNA,including rRNA,tRNA,mRNA and ncRNA are widely involved in normal physiology and diseases.m RNA,as the intermediary product between gene and protein,whose posttranscriptional regulations such as alternative splicing,alternative polyadenylation and modifications impact its coded protein expression and functions.However,the functional significance and therapeutic potential of RNA posttranscriptional regulations are not well studied due to the lack of suitable RNA engineering platforms.The discovery of a novel CRISPR-Cas system termed CRISPR-Cas13 in 2015 that specifically targets RNA templates brought a new role to CRISPR to target and edit RNA with high specificity,which opened a new era of RNA manipulations to some degree.This review will summarize the emerging applications of the catalytically inactive CRISPR-Cas13 system(CRISPR-dCas13)in mRNA engineering and highlight the prospection of the CRISPR-dCas13 system for other RNA modification regulations and its therapeutic potential. 展开更多
关键词 CRISPR-dCas13 rna posttranscriptional regulations alternative splicing alternative polyadenylation m 6 A modification base editing
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非编码RNA在肺纤维化过程中的调控作用
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作者 于经邦 吴亚云 《中国组织工程研究》 CAS 北大核心 2025年第8期1659-1666,共8页
背景:截至目前,肺纤维化的发病机制不明,治疗手段或者药物有限。大量研究发现,非编码RNA在肺纤维化的发生发展过程中发挥重要作用。目的:综述近年来非编码RNA在肺纤维化发病机制中的调控作用,深入了解肺纤维化的发病机制。方法:由第一... 背景:截至目前,肺纤维化的发病机制不明,治疗手段或者药物有限。大量研究发现,非编码RNA在肺纤维化的发生发展过程中发挥重要作用。目的:综述近年来非编码RNA在肺纤维化发病机制中的调控作用,深入了解肺纤维化的发病机制。方法:由第一作者应用计算机检索2000-2024年出版的文献,以“非编码RNA,微小RNA,长链非编码RNA,环状RNA,肺纤维化,综述”等为中文检索词检索中国知网、万方和维普数据库;以“ncRNA,miRNA,lncRNA,circRNA,Pulmonary fibrosis,review”等为英文检索词检索PubMed数据库,按照入选标准最终共纳入65篇文献进行综述。结果与结论:肺纤维化作为一种慢性且通常致命的肺部疾病,不仅可能自发产生,也可能是其他疾病的继发结果,主要特点是肺部间质中细胞外基质的异常增生和大量积累。非编码RNA是指由基因组转录出来的RNA分子,这些RNA分子并不涉及蛋白质的编码过程,凭借其调节能力已成为各种生物学现象中的一线分子参与者之一。非编码RNA在肺纤维化的发病机制中扮演着关键角色,微小RNA(miRNA)、长链非编码RNA(lncRNA)和环状RNA(circRNA)可以通过影响基因表达、转录后修饰以及细胞间的信号传导,参与到肺纤维化的发展过程中,为后续探索肺纤维化疾病的具体分子发生机制提供了新方向,为研发肺纤维化疾病的新靶向药物提供了理论依据及新思路。 展开更多
关键词 非编码rna 微小rna 长链非编码rna 环状rna 肺纤维化 综述
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Non-coding RNAs in acute ischemic stroke:from brain to periphery
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作者 Shuo Li Zhaohan Xu +7 位作者 Shiyao Zhang Huiling Sun Xiaodan Qin Lin Zhu Teng Jiang Junshan Zhou Fuling Yan Qiwen Deng 《Neural Regeneration Research》 SCIE CAS 2025年第1期116-129,共14页
Acute ischemic stroke is a clinical emergency and a condition with high morbidity,mortality,and disability.Accurate predictive,diagnostic,and prognostic biomarkers and effective therapeutic targets for acute ischemic ... Acute ischemic stroke is a clinical emergency and a condition with high morbidity,mortality,and disability.Accurate predictive,diagnostic,and prognostic biomarkers and effective therapeutic targets for acute ischemic stroke remain undetermined.With innovations in high-throughput gene sequencing analysis,many aberrantly expressed non-coding RNAs(ncRNAs)in the brain and peripheral blood after acute ischemic stroke have been found in clinical samples and experimental models.Differentially expressed ncRNAs in the post-stroke brain were demonstrated to play vital roles in pathological processes,leading to neuroprotection or deterioration,thus ncRNAs can serve as therapeutic targets in acute ischemic stroke.Moreover,distinctly expressed ncRNAs in the peripheral blood can be used as biomarkers for acute ischemic stroke prediction,diagnosis,and prognosis.In particular,ncRNAs in peripheral immune cells were recently shown to be involved in the peripheral and brain immune response after acute ischemic stroke.In this review,we consolidate the latest progress of research into the roles of ncRNAs(microRNAs,long ncRNAs,and circular RNAs)in the pathological processes of acute ischemic stroke–induced brain damage,as well as the potential of these ncRNAs to act as biomarkers for acute ischemic stroke prediction,diagnosis,and prognosis.Findings from this review will provide novel ideas for the clinical application of ncRNAs in acute ischemic stroke. 展开更多
关键词 acute ischemic stroke apoptosis blood–brain barrier damage circular rnas excitatory toxicity long non-coding rnas MICROrnaS NEUROINFLAMMATION non-coding rnas oxidative stress
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Remarkable carbon dioxide catalytic capture (CDCC) leading to solid-form carbon material via a new CVD integrated process (CVD-IP): An alternative route for CO_2 sequestration 被引量:5
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作者 Wei Chu Maofei Ran +4 位作者 Xu Zhang Ning Wang Yufei Wang Heping Xie Xiusong Zhao 《Journal of Energy Chemistry》 SCIE EI CAS CSCD 2013年第1期136-144,共9页
Through our newly-developed "chemical vapor deposition integrated process (ISVD-IP)'" using carbon OlOXlae (t..u2) as me raw matenal and only carbon source introduced, CO2 could be catalytically activated and c... Through our newly-developed "chemical vapor deposition integrated process (ISVD-IP)'" using carbon OlOXlae (t..u2) as me raw matenal and only carbon source introduced, CO2 could be catalytically activated and converted to a new solid-form product, i.e., carbon nanotubes (CO2-derived) at a quite high yield (the single-pass carbon yield in the solid-form carbon-product produced from CO2 catalytic capture and conversion was more than 30% at a single-pass carbon-base). For comparison, when only pure carbon dioxide was introduced using the conventional CVD method without integrated process, no solid-form carbon-material product could be formed. In the addition of saturated steam at room temperature in the feed for CVD, there were much more end-opening carbon nano-tubes produced, at a slightly higher carbon yield. These inspiring works opened a remarkable and alternative new approach for carbon dioxide catalytic capture to solid-form product, comparing with that of CO2 sequestration (CCS) or CO2 mineralization (solidification), etc. As a result, there was much less body volume and almost no greenhouse effect for this solid-form carbon-material than those of primitive carbon dioxide. 展开更多
关键词 carbon dioxide catalytic capture (CDCC) carbon nanotubes (CNTs) chemical vapor deposition integrated process (CVD-IP) solid-formcarbon material debating greenhouse gases (GHG) effects
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Synthesis of ternary magnetic nanoparticles for enhanced catalytic conversion of biomass-derived methyl levulinate into γ-valerolactone 被引量:1
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作者 Xueli Chen Tingting Zhao +6 位作者 Xuesong Zhang Yuxuan Zhang Haitao Yu Qian Lyu Xiwen Jia Lujia Han Weihua Xiao 《Journal of Energy Chemistry》 SCIE EI CAS CSCD 2021年第12期430-441,I0010,共13页
Conversion of levulinic acid and its esters into versatile y-valerolactone(GVL)is a pivotal and challenging step in biorefineries,limited by high catalyst cost,the use of hydrogen atmosphere,or tedious catalyst prepar... Conversion of levulinic acid and its esters into versatile y-valerolactone(GVL)is a pivotal and challenging step in biorefineries,limited by high catalyst cost,the use of hydrogen atmosphere,or tedious catalyst preparation and recycling process.Here we have successfully synthesized a ternary magnetic nanoparticle catalyst(Al_(2)O_(3)-ZrO_(2)/Fe_(3)O_(4)(5)),over which biomass-derived methyl levulinate(ML)can be quantitively converted to GVL with an extremely high selectivity of>99%and yield of-98%in the absence of molecular hydrogen.Al_(2)O_(3)-ZrO_(2)/Fe_(3)O_(4)(5)incorporates simultaneously inexpensive alumina and zirconia onto magnetite support by a facile coprecipitation method,giving rise to a core-shell structure,welldistributed acid-base sites,and strong magnetism,as evidenced by the X-ray diffraction(XRD),X-ray photoelectron spectroscopy(XPS),scanning electron microscopy(SEM),transmission electron microscopy(TEM),high-angle annular dark-field scanning-TEM(HAADF-STEM),SEM-energy dispersive Xray spectroscopy(SEM-EDX),temperature-programmed desorption of ammonia(NH3-TPD),temperature-programmed desorption of carbon dioxide(CO_(2)-TPD),pyridine-adsorption infrared spectra(Py-IR),and vibrating sample magnetometry(VSM).Such characteristics enable it to be highly active and easily recycled by a magnet for at least five cycles with a slight loss of its catalytic activity,avoiding a time-consuming and energy-intensive reactivation process.It is found that there was a synergistic effect among the metal oxides,and the high efficiency and selectivity originating from such synergism are evidenced by kinetic studies.Furthermore,a reaction mechanism regarding the hydrogenation of ML to GVL is proposed by these findings,coupled with gas chromatography-mass spectrometry(GC-MS)analysis.Accordingly,this readily synthesized and recovered magnetic nanocatalyst for conversion of biomassderived ML into GVL can provide an eco-friendly and safe way for biomass valorization. 展开更多
关键词 Magnetic nanoparticles Bifunctional catalyst Biomass conversion catalytic transfer hydrogenation γ-Valerolactone
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KRT18与mRNA及长链非编码RNA互作调控椎间盘髓核细胞损伤的机制
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作者 刘钟元 李扬 张志文 《中国组织工程研究》 CAS 北大核心 2025年第2期312-321,共10页
背景:椎间盘中差异表达的RNA结合蛋白在椎间盘退变中发挥着关键作用,其中RNA结合蛋白KRT18水平的降低与椎间盘退行性病变相关,但其在椎间盘髓核细胞中的具体作用尚未完全确定。目的:探讨KRT18与mRNA及长链非编码RNA结合互作对椎间盘髓... 背景:椎间盘中差异表达的RNA结合蛋白在椎间盘退变中发挥着关键作用,其中RNA结合蛋白KRT18水平的降低与椎间盘退行性病变相关,但其在椎间盘髓核细胞中的具体作用尚未完全确定。目的:探讨KRT18与mRNA及长链非编码RNA结合互作对椎间盘髓核细胞的影响及机制。方法:对因腰部骨折或椎间盘退行性病变而接受椎间融合术的患者进行人体髓核组织取样获得正常髓核细胞和退变髓核细胞,并进行iRIP-seq、功能富集分析以及DNA微阵列分析,随后根据分析结果在髓核细胞中敲低KRT18,通过蛋白免疫印迹及qRt-PCR在蛋白和RNA水平检测相关基因水平的表达。结果与结论:通过iRIP-seq分析发现GUAAUC和AGCCUC序列中存在大量的KRT18结合位点,表明KRT18可参与调控RNA的转录、翻译、稳定性或在细胞信号传导途径中发挥作用。其能够与成熟的mRNA稳定结合,其中表达较高的基因包括CRLF1及IGFBP4等,同时与其结合的长链非编码RNA的峰值基因包括SNHG25、SNHG12、NEAT1、USP32、EIF4A2和CDH4,这些基因多涉及细胞凋亡、炎症等多种生物过程,并且能介导细胞外基质代谢的相关通路,KRT18能够调控它们的稳定性、转运、翻译、剪接等多个方面的功能,进而影响基因的表达和细胞功能。实验结果验证了在髓核细胞中敲低KRT18,细胞外基质代谢水平被抑制出现失衡,导致体外椎间盘退变。该研究首次从KRT18与mRNA及长链非编码RNA结合的角度探讨其调控机制,并推测了KRT18在椎间盘退变发病机制中的潜在功能,为今后KRT18关键功能的研究奠定了基础。 展开更多
关键词 椎间盘退行性变 rna结合蛋白 KRT18 iRIP-seq Mrna 长链非编码rna
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Research on the Application in Glazed Tile Heating of the Low-Carbon Catalytic Combustion Furnace of Natural Gas
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作者 Ran Li Kai Fang 《Journal of Applied Mathematics and Physics》 2015年第8期1010-1014,共5页
This experiment aims to summarize the regular pattern of low-carbon catalytic combustion furnace of natural gas used in glazed tile heating. The tiles used for decorating which are heated by catalytic combustion furna... This experiment aims to summarize the regular pattern of low-carbon catalytic combustion furnace of natural gas used in glazed tile heating. The tiles used for decorating which are heated by catalytic combustion furnace are more fine and glossy than the conventional ones, moreover, pollutant emission produced in productive process is much less than before. This conclusion may provide a new way to glazed tile heating industry, and at the same time, provide a general method of using the catalytic combustion furnace. 展开更多
关键词 catalytic COMBUSTION Glazed TILE HEATING POLLUTANT Emission
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Research on Heating Clay by Low Carbon Catalytic Combustion Furnace of Natural Gas
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作者 Kai Fang Fan He Shihong Zhang 《Journal of Power and Energy Engineering》 2014年第12期7-10,共4页
This article did a research about exhaust gas constituent inside the catalytic combustion furnace with Pd-based honeycomb monoliths of lean natural gas-air mixtures and discussed the feature of the exhaust gas. In add... This article did a research about exhaust gas constituent inside the catalytic combustion furnace with Pd-based honeycomb monoliths of lean natural gas-air mixtures and discussed the feature of the exhaust gas. In addition, the near-zero pollutant emissions of catalytic combustion burner was proved by a test report provided by NIM. From a low-carbon prospective, the application prospect of catalytic combustion furnace was 展开更多
关键词 catalytic Combustion Low-Carbon EXHAUST Gas POLLUTANT Emissions
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Study on Properties of Glazed Tiles Heated by the Low-Carbon Catalytic Combustion Furnace of Natural Gas
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作者 Ran Li Fangjing Jia +1 位作者 Shihong Zhang Suilin Wang 《Journal of Applied Mathematics and Physics》 2016年第8期1455-1459,共5页
This experiment aims to summarize the properties of glazed tiles that heated by the low-carbon catalytic combustion furnace of natural gas. The tiles heated by the catalytic combustion furnace are more fine and glossy... This experiment aims to summarize the properties of glazed tiles that heated by the low-carbon catalytic combustion furnace of natural gas. The tiles heated by the catalytic combustion furnace are more fine and glossy than the conventional ones. This conclusion provides a new way to glazed tile heating industry. Only with a better understanding of catalytic combustion, can the application benefit our environment and industry. 展开更多
关键词 Glazed Tile Heating catalytic Combustion
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RNA pull-down联合质谱分析lncRNA HSFAS在增生性瘢痕中的作用及机制
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作者 夏童童 马芳 +8 位作者 孙浩原 刘虹麟 张正皓 杨佳琪 张慧萍 吴凯 沈江涌 姜怡邓 李桂忠 《中国组织工程研究》 CAS 北大核心 2025年第12期2492-2499,共8页
背景:课题组前期研究发现,增生性瘢痕特异性长链非编码RNA HSFAS是一种可用于增生性瘢痕诊断的新型生物标志物,但其如何在增生性瘢痕中发挥作用尚不清楚。目的:探讨长链非编码RNA HSFAS在增生性瘢痕中的作用及机制。方法:临床收集3例行... 背景:课题组前期研究发现,增生性瘢痕特异性长链非编码RNA HSFAS是一种可用于增生性瘢痕诊断的新型生物标志物,但其如何在增生性瘢痕中发挥作用尚不清楚。目的:探讨长链非编码RNA HSFAS在增生性瘢痕中的作用及机制。方法:临床收集3例行增生性瘢痕组织切除手术患者的新鲜增生性瘢痕皮肤组织和增生性瘢痕旁正常皮肤组织标本,应用免疫荧光技术检测两种皮肤组织冰冻切片中长链非编码RNA HSFAS的表达。应用酶消化法体外分离增生性瘢痕皮肤组织与正常皮肤组织原代成纤维细胞,采用qRT-PCR检测细胞中长链非编码RNA HSFAS mRNA表达,通过RNA pull-down联合质谱技术检测与长链非编码RNA HSFAS相互结合的蛋白,利用GO和KEGG分析长链非编码RNA HSFAS参与增生性瘢痕进展的主要功能和通路,通过catRAPID和RPISeq网站分析确定长链非编码RNA HSFAS与蛋白的靶向结合。结果与结论:①与正常皮肤组织相比,增生性瘢痕组织中的长链非编码RNA HSFAS表达升高(P<0.05);与正常皮肤组织来源成纤维细胞相比,增生性瘢痕组织来源成纤维细胞中长链非编码RNA HSFAS mRNA表达升高(P<0.05);②RNA pull-down联合质谱技术明确与长链非编码RNA HSFAS相互结合的蛋白有510个;GO和KEGG分析结果显示:这些蛋白主要涉及RNA剪接和加工、染色体合成和分离、细胞周期等过程,其中涉及RNA剪接和加工的蛋白有支架附着因子B2和DICER1,并且与长链非编码RNA HSFAS的结合分数较高;生物信息学技术分析验证结果显示,长链非编码RNA HSFAS与支架附着因子B2和DICER1蛋白存在相互结合;③结果显示,长链非编码RNA HSFAS可能通过与支架附着因子B2和DICER1蛋白相互结合调控RNA剪接和加工修饰影响基因表达,从而促进增生性瘢痕的发生发展。 展开更多
关键词 增生性瘢痕 lncrna HSFAS 成纤维细胞 rna pull-down 质谱分析
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长链非编码RNA在急性肺损伤中的作用及分子调控机制研究进展 被引量:1
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作者 罗飞 张红 《山东医药》 CAS 2024年第6期93-97,共5页
急性肺损伤(ALI)是临床上常见的危重症之一。长链非编码RNA(lncRNA)是一类长度超过200个核苷酸的非蛋白质编码RNA,在染色质形成、转录和转录后翻译等基因表达水平直接或间接参与ALI的发生发展。lncRNA核富集丰富转录物1、lncRNA HOX转... 急性肺损伤(ALI)是临床上常见的危重症之一。长链非编码RNA(lncRNA)是一类长度超过200个核苷酸的非蛋白质编码RNA,在染色质形成、转录和转录后翻译等基因表达水平直接或间接参与ALI的发生发展。lncRNA核富集丰富转录物1、lncRNA HOX转录反义基因间RNA及lncRNA牛磺酸上调1等lncRNA可作为竞争性内源RNA,与miR-26a-5p、miR-17-5p及miR-34b-5p等微小RNA结合,调节Wnt1诱导的信号通路蛋白1、Rho关联含卷曲螺旋结合蛋白激酶1蛋白及自噬相关蛋白等下游相关蛋白的表达,参与ALI的发生发展。LncRNA可能通过调控DNA甲基化、组蛋白修饰,在表观遗传水平参与ALI的发生发展;L通过组装转录激活因子和抑制因子,调节白细胞介素6(IL-6)、IL-17、含半胱氨酸的天冬氨酸蛋白水解酶3/9等蛋白质的转录,在转录水平参与ALI的发生发展;与多种RNA结合蛋白相互作用,在转录后水平调控ALI的发生发展。 展开更多
关键词 长链非编码rna lncrna核富集丰富转录物1 lncrna HOX转录反义基因间rna lncrna牛磺酸上调1 微小rna DNA甲基化 转录激活因子 rna结合蛋白 急性肺损伤
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外泌体来源非编码RNA对骨关节炎微环境的作用及临床应用进展
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作者 李志超 杨振国 +4 位作者 王磊 王文波 薛景才 刘文斌 曹慧 《中国组织工程研究》 CAS 北大核心 2025年第13期2784-2792,共9页
背景:骨关节炎是一种常见的关节退行性疾病,其发生发展的病因学机制尚不清楚。早期骨关节炎的及时诊治十分重要,目前尚无确切有效的方法。外泌体来源广泛,其中包含非编码RNA(Non-coding RNAs,ncRNAs),如微小RNAs、环状RNAs和长链非编码R... 背景:骨关节炎是一种常见的关节退行性疾病,其发生发展的病因学机制尚不清楚。早期骨关节炎的及时诊治十分重要,目前尚无确切有效的方法。外泌体来源广泛,其中包含非编码RNA(Non-coding RNAs,ncRNAs),如微小RNAs、环状RNAs和长链非编码RNAs。外泌体ncRNAs可直接从原始细胞递送至邻近或远程细胞,通过细胞间通讯调节细胞活性,在重塑骨关节微环境中具有重要的调控作用。目的:总结外泌体来源ncRNAs对骨关节炎关节内微环境的干预作用,以及在临床应用中取得的进展,阐明其在骨关节炎诊治方面的潜力。方法:以“exosomes,non-coding RNA,osteoarthritis,application,signal pathway,synovial fluid,cartilage cells,cartilage matrix,subchondral bone,mechanism”为检索词在PubMed数据库中进行检索,最终纳入66篇相关文献进行综述分析。结果与结论:①外泌体来源ncRNAs在骨关节炎的发病过程中对关节内微环境具有重要调控作用,主要体现在外泌体ncRNAs调控关节内炎症反应、软骨细胞及软骨基质的退化,软骨下骨重塑和细胞间通讯。②外泌体中的ncRNAs可以作为骨关节炎的生物标志物,帮助骨关节炎的早期诊断和监测疾病进展与预后。③外泌体ncRNAs可作为骨关节炎的治疗靶点,外泌体携带miRNAs递送到关节的软骨细胞及软骨基质,发挥调控作用。④外泌体ncRNAs可以通过调控基因表达、促进细胞间通讯,提高软骨组织工程的效果,修复或再生受损软骨。⑤未来研究者应继续发掘外泌体来源ncRNAs对骨关节炎的干预机制,并可结合最新软骨组织工程的研究成果应用到临床之中,这将有效帮助解决骨关节炎患者的病痛。 展开更多
关键词 外泌体 非编码rna 骨关节炎 关节内微环境 信号通路 软骨退变 生物标志物 临床应用
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肾病综合征病人血清lncRNA ANRIL和BDNF水平变化与血栓栓塞的相关性分析
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作者 顾玉 梁晓艳 +2 位作者 马胜辉 佟娜 阎泽君 《安徽医药》 CAS 2025年第1期141-146,共6页
目的探究肾病综合征(NS)病人血清长链非编码RNA(lncRNA)细胞周期激酶抑制因子4基因座中反义非编码RNA(ANRIL)和脑源性神经营养因子(BDNF)水平变化与血栓栓塞(TE)的相关性。方法选取2019年3月至2021年12月在承德市中心医院住院治疗的220... 目的探究肾病综合征(NS)病人血清长链非编码RNA(lncRNA)细胞周期激酶抑制因子4基因座中反义非编码RNA(ANRIL)和脑源性神经营养因子(BDNF)水平变化与血栓栓塞(TE)的相关性。方法选取2019年3月至2021年12月在承德市中心医院住院治疗的220例NS病人为研究对象,根据随访结果将其分为NS组118例和TE组102例,另外选取同期体检健康者100例为对照组。采用实时荧光定量PCR(qRT-PCR)测定研究对象血清lncRNA ANRIL水平;采用酶联免疫吸附测定(ELISA)检测研究对象血清BDNF水平;使用全自动生化分析仪检测相关生化指标;采用Pearson相关性分析血清lncRNA ANRIL、BDNF水平与生化指标相关性;采用多因素logistic回归分析NS病人发生TE的影响因素;采用受试者操作特征曲线(ROC曲线)分析血清lncRNA ANRIL、BDNF在预测NS病人发生TE中的价值。结果与对照组相比较,NS组、TE组血清lncRNA ANRIL水平显著升高(2.54±0.43比5.82±1.34、8.35±2.17),BDNF水平显著降低[(32.77±8.25)μg/L比(24.49±4.58)μg/L、(18.63±3.62)μg/L](P<0.05);与NS组相比较,TE组血清lncRNA ANRIL水平显著升高,BDNF水平显著降低(P<0.05);对照组、NS组、TE组三组的尿酸、血肌酐、乳酸脱氢酶、血尿素氮、尿蛋白水平呈逐渐升高趋势,血清白蛋白、血红蛋白水平呈逐渐降低趋势(P<0.05)。Pearson相关性分析显示,NS合并TE病人血清lncRNA ANRIL水平与尿酸、血肌酐、乳酸脱氢酶、血尿素氮、尿蛋白水平呈正相关,与血清白蛋白、血红蛋白水平呈负相关(P<0.05);NS合并TE病人血清BDNF水平与尿酸、血肌酐、乳酸脱氢酶、血尿素氮、尿蛋白水平呈负相关,与血清白蛋白、血红蛋白水平呈正相关(P<0.05)。多因素logistic回归分析显示,lncRNA ANRIL、尿蛋白和BDNF是NS病人发生TE的影响因素(P<0.05);ROC曲线结果显示,血清lncRNA ANRIL、BDNF预测NS病人发生TE的曲线下面积(AUC)分别为0.84、0.85,两者联合预测的AUC为0.92,高于lncRNA ANRIL、BDNF单独检测,特异度为83.05%,灵敏度为88.24%。结论NS伴TE病人中血清lncRNA ANRIL水平升高,BDNF水平降低,二者对NS病人发生TE具有一定的预测价值。 展开更多
关键词 肾病综合征 非编码rna ANRIL 脑源性神经营养因子 血栓栓塞 预测价值
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RNA结构对RNA沉默效率的影响
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作者 赵建华 高峰 +1 位作者 刘清艳 郭惠珊 《生物技术通报》 CAS CSCD 北大核心 2024年第10期19-29,共11页
小RNA(small RNA,sRNA)介导的RNA沉默或RNA干扰(RNA silencing or RNA interference,RNAi)是真核生物基因表达调控的保守机制。内源或外源双链RNA(double-stranded RNA,dsRNA)被加工成sRNA,sRNA通过碱基互补配对识别靶标基因mRNA或DNA,... 小RNA(small RNA,sRNA)介导的RNA沉默或RNA干扰(RNA silencing or RNA interference,RNAi)是真核生物基因表达调控的保守机制。内源或外源双链RNA(double-stranded RNA,dsRNA)被加工成sRNA,sRNA通过碱基互补配对识别靶标基因mRNA或DNA,通过降解mRNA、抑制翻译或者DNA甲基化在转录后或者转录水平调控基因表达。由于sRNA作用靶标特异性,RNAi技术被广泛地应用于基因功能研究、生物医药、作物分子设计育种以及开发新型农药等领域。自然界中sRNA能够在不同物种间传递并发挥作用,这一现象为RNAi应用技术的开发提供了理论基础。研究发现,dsRNA诱导RNAi的效率受多种因素影响,例如长度、剂量以及施用方式等。在细胞中,RNA结构的复杂性决定了其功能的多样性。本文概述了基于RNAi的作物病害防控技术的原理,包括宿主诱导的基因沉默(host-induced gene silencing,HIGS)技术、喷施诱导的基因沉默(spray-induced gene silencing,SIGS)技术和微生物诱导的基因沉默(microbe-induced gene silencing,MIGS)技术;总结了靶标RNA和sRNA结构影响RNAi效率的实验证据,以期加深对RNA结构影响RNAi效率地理解,为靶标筛选以及dsRNA设计提供经验,为开发高效RNAi技术提供参考;最后归纳了RNA结构检测和预测的代表性方法,为辅助设计高效诱导RNAi的dsRNA提供方法。 展开更多
关键词 rna rna沉默 双链rna rna结构
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小细胞外囊泡及其携带的非编码RNA在非酒精性脂肪性肝病中的作用
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作者 李想 李晔 《生物化学与生物物理进展》 SCIE CAS CSCD 北大核心 2024年第5期1054-1066,共13页
小细胞外囊泡(small extracellular vesicles,sEVs)是由细胞分泌的一种细胞外囊泡,产生于多泡体,多泡体与质膜融合并释放到细胞外基质。由于小细胞外囊泡可以携带分子质量相对较小的核酸、蛋白质、脂质,能够执行细胞间物质传递、细胞间... 小细胞外囊泡(small extracellular vesicles,sEVs)是由细胞分泌的一种细胞外囊泡,产生于多泡体,多泡体与质膜融合并释放到细胞外基质。由于小细胞外囊泡可以携带分子质量相对较小的核酸、蛋白质、脂质,能够执行细胞间物质传递、细胞间通讯等功能。因此,小细胞外囊泡及其携带的非编码RNA不仅参与细胞正常生理过程,也可以在多种疾病的发生发展过程中起重要作用。本文综述了小细胞外囊泡在非酒精性脂肪性肝病(NAFLD)中的作用,小细胞外囊泡及其携带的非编码RNA不仅有望成为NAFLD诊断的标志物,同时也具有治疗NAFLD的潜在作用,或能为治疗NAFLD提供新思路。 展开更多
关键词 小细胞外囊泡 非酒精性脂肪性肝病 非编码rna 微小rna 长链非编码rna 环状rna
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非编码RNA在颞下颌关节炎中的研究进展
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作者 武文婧 苏俭生 《口腔颌面外科杂志》 CAS 2024年第2期146-149,共4页
颞下颌关节炎(temporomandibular joint osteoarthritis,TMJOA)是一种临床常见疾病,但发病机制尚不明确且缺乏有效的治疗手段,给患者带来很大困扰。因此,探究TMJOA的发病机制,寻找有效的治疗方法具有重要意义。近年来的研究表明,非编码R... 颞下颌关节炎(temporomandibular joint osteoarthritis,TMJOA)是一种临床常见疾病,但发病机制尚不明确且缺乏有效的治疗手段,给患者带来很大困扰。因此,探究TMJOA的发病机制,寻找有效的治疗方法具有重要意义。近年来的研究表明,非编码RNA(noncoding RNA,ncRNA)参与调控TMJOA的发生、发展,在其诊断和治疗方面具有巨大潜力,因此有望成为新的诊断标志物和治疗靶标。本文将对ncRNA在TMJOA中的研究进展作一综述。 展开更多
关键词 非编码rna 颞下颌关节炎 微小rna 长链非编码rna 环状rna
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细胞外囊泡携带非编码RNA调控破骨细胞的活化
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作者 刘建宏 廖世杰 +3 位作者 李波香 唐生平 韦帧翟 丁晓飞 《中国组织工程研究》 CAS 北大核心 2024年第7期1076-1082,共7页
背景:目前已证明破骨细胞活化在骨骼系统相关疾病中发挥着重要的作用,胞外囊泡携带非编码RNA调控破骨细胞活化的机制仍未完全阐明。目的:阅读并总结国内外相关文献,按细胞外囊泡中不同的非编码RNA在不同疾病中调控破骨细胞活化进行综述... 背景:目前已证明破骨细胞活化在骨骼系统相关疾病中发挥着重要的作用,胞外囊泡携带非编码RNA调控破骨细胞活化的机制仍未完全阐明。目的:阅读并总结国内外相关文献,按细胞外囊泡中不同的非编码RNA在不同疾病中调控破骨细胞活化进行综述,为后续研究提供一定的方向。方法:以“非编码RNA,miRNA,lncRNA,circRNA,snoRNA,破骨细胞,细胞外囊泡,外泌体,膜微粒,凋亡小体”为检索词检索中国知网、万方、维普等数据库,以“extracellular vesicles,exosome,microparticle,apoptotic bodies,non-coding RNA,miRNA,lncRNA,circRNA,snoRNA,osteoclast”为检索词检索Pub Med等数据库,最终纳入71篇文献进行综述。结果与结论:(1)破骨细胞的活化受多种因素影响,其中非编码RNA调控破骨细胞活化的具体机制尚未明确。(2)细胞外囊泡可以由成骨细胞、骨髓间充质干细胞、肿瘤细胞等多种细胞分泌,作为细胞间通讯的一种载体,能够携带非编码RNA对破骨细胞活化进行调控。(3)目前关于细胞外囊泡携带非编码RNA调控破骨细胞活化的疾病研究中,多数为骨质疏松,其次为肿瘤骨转移,而非编码RNA的种类又以mi RNA最多。(4)细胞外囊泡携带长链非编码RNA、环状RNA及核仁小RNA调控破骨细胞活化的相关研究相对较少,其调控机制主要为竞争性内源RNA机制。(5)综上,深入研究细胞外囊泡携带非编码RNA对破骨细胞活化的调控机制,有助于找到治疗骨骼系统相关疾病的关键靶点。 展开更多
关键词 细胞外囊泡 非编码rna MIrna lncrna circrna SNOrna 破骨细胞
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非编码小RNA在口腔黏膜下纤维性变中的研究进展
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作者 彭慧 吴颖芳 《口腔疾病防治》 2024年第4期310-314,共5页
口腔黏膜下纤维性变(oral submucous fibrosis,OSF)是口腔黏膜最常见的癌前病变之一,其发病机制至今尚未完全阐明。非编码小RNA(small non-coding RNAs,SncRNAs)是一类不编码蛋白质的RNA分子,已被广泛报道参与多种人类疾病的调控。越来... 口腔黏膜下纤维性变(oral submucous fibrosis,OSF)是口腔黏膜最常见的癌前病变之一,其发病机制至今尚未完全阐明。非编码小RNA(small non-coding RNAs,SncRNAs)是一类不编码蛋白质的RNA分子,已被广泛报道参与多种人类疾病的调控。越来越多的研究表明多种SncRNAs在OSF发病过程中发挥重要作用。现有研究表明,微RNA(microRNAs,miRNAs)通过调控相关转录因子和基因表达或上皮间充质转化来调控成纤维细胞(fbroblasts,FB)活化而参与OSF疾病进展;长非编码RNA(long noncoding RNAs,lncRNAs)通过调控转化生长因子-β/母体抗瘫抑制因子(transforming growth factor-β/suppressor of mothers against decapentaplegic,TGF-β/Smad)信号通路或与miRNA相互作用参与OSF的发生发展;环状RNA(circular RNAs,circRNAs)通过与miRNA相互作用在OSF中发挥作用;tRNA衍生的小RNA(tRNA-derived small RNAs,tsRNAs)参与多种纤维化疾病的进展,但其在OSF中的具体作用机制仍需进一步探索。未来仍需重点关注SncRNAs介导OSF进展的作用靶点,探究其对OSF的作用功能及分子机制,以期为诊断和治疗OSF提供新思路。 展开更多
关键词 口腔黏膜下纤维性变 非编码小rna rna 长非编码rna 环状rna trna衍生的小rna 成纤维细胞
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