To identify the pathogen that causes scuticociliatosis in farmed-raised turbot Scophthalmus maximus , we isolated a ciliate from the brain tissue of an infected turbot and identifi ed it as Uronema marinum based on mo...To identify the pathogen that causes scuticociliatosis in farmed-raised turbot Scophthalmus maximus , we isolated a ciliate from the brain tissue of an infected turbot and identifi ed it as Uronema marinum based on morphological and molecular evidence. We then infected the turbots in artifi cial laboratory settings with pure cultured U . marinum . The infected turbots showed syndromes similar to those observed in naturally infected ones. Furthermore, microscopic examination and PCR detection confi rmed the presence of the ciliate in the tissues of those laboratory-infected turbots. To our best knowledge, this is the fi rst report of scuticociliatosis caused by U . marinum in farm-raised turbot S . maximus in China.展开更多
The fermentation broth of Salinivibrio proteolyticus strain YCSC6 shows potent anti-parasitic activity against Uronema marinum,with activity varying in each fermentation stage.To investigate the biosynthetic mechanism...The fermentation broth of Salinivibrio proteolyticus strain YCSC6 shows potent anti-parasitic activity against Uronema marinum,with activity varying in each fermentation stage.To investigate the biosynthetic mechanism of anti-parasitic compounds in strain YCSC6,a comprehensive analysis of metabolomics and transcriptomics over four diff erent time points(12,24,48,and 72 h)was performed.Metabolomics detected 17943 metabolites with 1129 known metabolites.A trend analysis of the known metabolites showed that 575 metabolites,including 69 polyketides,were continuously enhanced,being the potential source of anti-parasitic agents.In addition,941 genes mapped to the same pathways of these metabolites,were screened through the association analysis of metabolites and genes.KEGG pathway enrichment of these genes showed 270 genes mapped to the biosynthesis of secondary metabolites and 192 genes mapped to the biosynthesis of antibiotics.This demonstrates the potent secondary metabolic capacity of strain YCSC6.Finally,a gene-metabolite correlation network was created based on the 575 continuously enhanced metabolites and 43 continuously up-regulated genes.This revealed 13 genes at the key position that mapped to a putative metabolic pathway associated with the biosynthesis of polyketides and caprylic acid,which contributes to the potent anti-parasitic activity of strain YCSC6.This comprehensive analysis of metabolomics and transcriptomics provides insights into the biosynthetic mechanisms of anti-parasitic compounds in strain YCSC6 and guides the exploitation of more anti-parasitic agents for aquaculture.展开更多
基金Supported by the National Key R&D Program of China(No.2017YFC1404504)the National Basic Research Program of China(973 Program)(No.2015CB755904)+1 种基金the Scientific and Technological Innovation Project financially supported by Qingdao National Laboratory for Marine Science and Technology(Nos.2015ASKJ02,2016ASKJ14)the Laboratory for Marine Fisheries Science and Food Production Processes,Qingdao National Laboratory for Marine Science and Technology(No.2016LMFS-B08)
文摘To identify the pathogen that causes scuticociliatosis in farmed-raised turbot Scophthalmus maximus , we isolated a ciliate from the brain tissue of an infected turbot and identifi ed it as Uronema marinum based on morphological and molecular evidence. We then infected the turbots in artifi cial laboratory settings with pure cultured U . marinum . The infected turbots showed syndromes similar to those observed in naturally infected ones. Furthermore, microscopic examination and PCR detection confi rmed the presence of the ciliate in the tissues of those laboratory-infected turbots. To our best knowledge, this is the fi rst report of scuticociliatosis caused by U . marinum in farm-raised turbot S . maximus in China.
基金Supported by the National Key R&D Program of China(No.2017YFC1404504)the Youth Talent Program Supported by Laboratory for Marine Fisheries Science and Food Production Processes,Pilot National Laboratory for Marine Science and Technology(No.2018-MFS-T16)。
文摘The fermentation broth of Salinivibrio proteolyticus strain YCSC6 shows potent anti-parasitic activity against Uronema marinum,with activity varying in each fermentation stage.To investigate the biosynthetic mechanism of anti-parasitic compounds in strain YCSC6,a comprehensive analysis of metabolomics and transcriptomics over four diff erent time points(12,24,48,and 72 h)was performed.Metabolomics detected 17943 metabolites with 1129 known metabolites.A trend analysis of the known metabolites showed that 575 metabolites,including 69 polyketides,were continuously enhanced,being the potential source of anti-parasitic agents.In addition,941 genes mapped to the same pathways of these metabolites,were screened through the association analysis of metabolites and genes.KEGG pathway enrichment of these genes showed 270 genes mapped to the biosynthesis of secondary metabolites and 192 genes mapped to the biosynthesis of antibiotics.This demonstrates the potent secondary metabolic capacity of strain YCSC6.Finally,a gene-metabolite correlation network was created based on the 575 continuously enhanced metabolites and 43 continuously up-regulated genes.This revealed 13 genes at the key position that mapped to a putative metabolic pathway associated with the biosynthesis of polyketides and caprylic acid,which contributes to the potent anti-parasitic activity of strain YCSC6.This comprehensive analysis of metabolomics and transcriptomics provides insights into the biosynthetic mechanisms of anti-parasitic compounds in strain YCSC6 and guides the exploitation of more anti-parasitic agents for aquaculture.
