Ancestry composition of populations and individuals has been extensively investigated in recent years due to advances in the genotyping and sequencing technologies. As the number of populations and individuals used fo...Ancestry composition of populations and individuals has been extensively investigated in recent years due to advances in the genotyping and sequencing technologies. As the number of populations and individuals used for ancestry inference increases remarkably, say more than 100 populations or 1000 individuals, it is usually challenging to present the ancestry composition in a traditional way using a rectangular graph. To address this issue, we developed a program,AncestryPainter, which can illustrate the ancestry composition of populations and individuals with a rounded and nice-looking graph to save space. Individuals are depicted as length-fixed bars partitioned into colored segments representing different ancestries, and the population of interest can be highlighted as a pie chart in the center of the circle plot. In addition, AncestryPainter can also be applied to display personal ancestry in a way similar to that for displaying population ancestry.AncestryPainter is publicly available at http://www.picb.ac.cn/PGG/resource.php.展开更多
基金supported by the Strategic Priority Research Program (Grant No. XDB13040100)Key Research Program of Frontier Sciences (Grant No. QYZDJ-SSWSYS009) of the Chinese Academy of Sciences+5 种基金the National Natural Science Foundation (Grant Nos. 91731303,31771388, and 31711530221)the National Science Fund for Distinguished Young Scholars (Grant No. 31525014)the Program of Shanghai Academic Research Leader (Grant No. 16XD1404700)the National Key R&D Program (Grant No. 2016YFC0906403)the Shanghai Municipal Science and Technology Major Project (Grant No. 2017SHZDZX01), Chinathe support of the ‘‘Ten-Thousand Talents” Program for Young Top-notch Talents, China
文摘Ancestry composition of populations and individuals has been extensively investigated in recent years due to advances in the genotyping and sequencing technologies. As the number of populations and individuals used for ancestry inference increases remarkably, say more than 100 populations or 1000 individuals, it is usually challenging to present the ancestry composition in a traditional way using a rectangular graph. To address this issue, we developed a program,AncestryPainter, which can illustrate the ancestry composition of populations and individuals with a rounded and nice-looking graph to save space. Individuals are depicted as length-fixed bars partitioned into colored segments representing different ancestries, and the population of interest can be highlighted as a pie chart in the center of the circle plot. In addition, AncestryPainter can also be applied to display personal ancestry in a way similar to that for displaying population ancestry.AncestryPainter is publicly available at http://www.picb.ac.cn/PGG/resource.php.
