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百脉根PIN基因家族的鉴定与分析 被引量:2
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作者 吕赟 丘日光 +2 位作者 杨仕梅 吴佳海 宋莉 《河南农业科学》 北大核心 2019年第8期39-48,共10页
生长素输出载体蛋白PIN-formed(PIN)是一类调控植物生长素极性运输的重要载体元件,与植物生长发育密切相关。利用生物信息学方法对百脉根(Lotuscorniculatus)PIN基因家族成员(LjPIN)进行筛选、鉴定,并对其结构特征、系统进化、编码蛋白... 生长素输出载体蛋白PIN-formed(PIN)是一类调控植物生长素极性运输的重要载体元件,与植物生长发育密切相关。利用生物信息学方法对百脉根(Lotuscorniculatus)PIN基因家族成员(LjPIN)进行筛选、鉴定,并对其结构特征、系统进化、编码蛋白质性质、顺式作用元件组成和表达特性等进行研究,为其功能鉴定及利用奠定基础。结果表明,百脉根基因组中含有27个LjPIN成员,主要分布在1-5号染色体上;27个LjPIN基因含8个可变剪切位点,编码35个蛋白质;除了LjPIN4、LjPIN13、LjPIN23基因外,其他LjPIN基因均含有内含子,内含子数和外显子数均为1~10个;LjPIN与拟南芥AtPIN、大豆GmPIN在进化关系上较接近,与水稻OsPIN较远;LjPIN蛋白大多为碱性的两性稳定蛋白质,一般含有5种保守基序,基序数量2~9个;LjPIN基因除了含有顺式作用基本元件CAAT-box和TATA-box外,还含有光响应、激素响应及生长发育相关的调控元件;11个LjPIN基因在根、茎、叶、花和不同形成时期种子中呈时空差异表达。 展开更多
关键词 百脉根 生长素输出载体蛋白 PIN基因家族 生物信息学分析
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Phosphorylation‐dependent Traffcking of Plasma Membrane Proteins in Animal and Plant Cells 被引量:5
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作者 Remko Offringa Fang Huang 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2013年第9期789-808,共20页
In both unicellular and multicellular organisms, transmembrane (TM) proteins are sorted to and retained at specific membrane domains by endomembrane trafficking mechanisms that recognize sorting signals in the these... In both unicellular and multicellular organisms, transmembrane (TM) proteins are sorted to and retained at specific membrane domains by endomembrane trafficking mechanisms that recognize sorting signals in the these proteins. The trafficking and distribution of plasma membrane (PM)-localized TM proteins (PM proteins), especially of those PM proteins that show an asymmetric distribution over the PM, has received much attention, as their proper PM localization is crucial for elementary signaling and transport processes, and defects in their localization often lead to severe disease symptoms or developmental defects. The subcellular localization of PM proteins is dynamically regulated by post-translational modifications, such as phosphorylation and ubiquitination. These modificaitons mostly occur on sorting signals that are located in the larger cytosolic domains of the cargo proteins. Here we review the effects of phosphorylation of PM proteins on their trafficking, and present the key examples from the animal field that have been subject to studies for already several decades, such as that of aquaporin 2 and the epidermal growth factor receptor. Our knowledge on cargo trafficking in plants is largely based on studies of the family of PIN FORMED (PIN) carriers that mediate the efflux of the plant hormone auxin. We will review what is known on the subcellular distribution and trafficking of PIN proteins, with a focus on how this is modulated by phosphorylation, and identify and discuss analogies and differences in trafficking with the well-studied animal examples. 展开更多
关键词 Ceil polarity endosomal trafficking PHOSPHORYLATION PIN auxin efflux carriers plasmamembrane-iocalized transmembrane proteins.
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Enquiry into the Topology of Plasma Membrane- Localized PIN Auxin Transport Components
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作者 Tomasz Nodzynski Steffen Vanneste +3 位作者 Marta Zwiewka Marketa Pernisova Jan Hejatko Jiri Friml 《Molecular Plant》 SCIE CAS CSCD 2016年第11期1504-1519,共16页
Auxin directs plant ontogenesis via differential accumulation within tissues depending largely on the activity of PIN proteins that mediate auxin efflux from cells and its directional cell-to-cell transport. Regard- l... Auxin directs plant ontogenesis via differential accumulation within tissues depending largely on the activity of PIN proteins that mediate auxin efflux from cells and its directional cell-to-cell transport. Regard- less of the developmental importance of PINs, the structure of these transporters is poorly characterized. Here, we present experimental data concerning protein topology of plasma membrane-localized PINs. Utilizing approaches based on pH-dependent quenching of fluorescent reporters combined with immuno- localization techniques, we mapped the membrane topology of PINs and further cross-validated our results using available topology modeling software. We delineated the topology of PIN1 with two transmembrane (TM) bundles of five m-helices linked by a large intracellular loop and a C-terminus positioned outside the cytoplasm. Using constraints derived from our experimental data, we also provide an updated position of helical regions generating a verisimilitude model of PIN1. Since the canonical long PINs show a high degree of conservation in TM domains and auxin transport capacity has been demonstrated for Arabidopsis representatives of this group, this empirically enhanced topological model of PIN1 will be an important starting point for further studies on PIN structure-function relationships. In addition, we have established protocols that can be used to probe the topology of other plasma membrane proteins in plants. 展开更多
关键词 plasma membrane protein topology auxin efflux carriers Arabidopsis thaliana
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生长素的外输载体PIN蛋白家族研究进展 被引量:23
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作者 邹纯雪 门淑珍 《中国细胞生物学学报》 CAS CSCD 北大核心 2013年第5期574-582,共9页
生长素作为第一个被发现的植物激素,在植物许多发育过程中扮演着重要角色,如顶端优势、花序和叶序的发育、胚的发育、主根的发育、侧根和不定根的发生、向性生长以及维管组织的分化等,这些过程都依赖于生长素浓度梯度的建立。生长素的... 生长素作为第一个被发现的植物激素,在植物许多发育过程中扮演着重要角色,如顶端优势、花序和叶序的发育、胚的发育、主根的发育、侧根和不定根的发生、向性生长以及维管组织的分化等,这些过程都依赖于生长素浓度梯度的建立。生长素的浓度梯度是由生长素的合成和极性运输共同建立的。生长素极性运输依赖于内输载体AUX/LAX家族、外输载体PIN蛋白家族和ABCB/PGP蛋白家族。该文将主要综述PIN蛋白家族的研究进展,介绍PIN蛋白的定位和功能研究、转录和转录后调控研究以及其胞内循环运输过程等方面的研究进展。 展开更多
关键词 生长素 PIN蛋白 生长素外输蛋白 极性定位 胞内运输
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