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Spatial-temporal dynamics of bacterioplankton communities in the breeding area of large yellow croaker Larimichthys crocea in Sansha Bay,China
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作者 Shizhan ZHENG Shouheng ZHOU +4 位作者 Wen YANG Betina LUKWAMBE Regan NICHOLAUS Jinyong ZHU Zhongming ZHENG 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2023年第4期1481-1492,共12页
As an important spawning ground for large yellow croaker Larimichthys crocea,Sansha Bay,South China Sea has been a research hotspot.However,studies on the influence of the bacterioplankton community and assessments of... As an important spawning ground for large yellow croaker Larimichthys crocea,Sansha Bay,South China Sea has been a research hotspot.However,studies on the influence of the bacterioplankton community and assessments of its seasonal succession of bacterioplankton in different sea areas in Sansha Bay are still limited.To address the issue,we use 16S rRNA gene amplicon sequencing and functional prediction to investigate the spatial-temporal dynamics of the bacterioplankton community in three distinct areas,i.e.,Breeding Area(BA),Yantian Harbor(YH),and Bay Margin(BM)of Sansha Bay.Results show that the structure of the bacterioplankton community in Sansha Bay had a significant seasonal succession.Moreover,the representative zero-radius Operation Taxon Units in different seasons were significantly different among the three selected sea areas.Specifically,during the breeding season,bacterioplankton communities in BA were characterized by compound-degrading bacteria,such as Rhodococcus and Owenweeksia,while in YH and BM,animal parasites or symbionts such as Vibrio and Arcobacter were dominant.Furthermore,the redundancy analysis and Spearman correlation analysis further explained that water temperature,dissolved oxygen,and ammonia nitrogen were the main environmental factors responsible for the difference.In addition,the bioindicator functions screened by Functional Annotation of Prokaryotic Taxa and random forest machine learning mainly relied on compound degradation,nitrite oxidation,and photoheterotrophy.The compound-degradationcorresponded bacterioplankton genera such as Rhodococcus had relatively higher abundance in BM,while Nitrospina corresponding to nitrite oxidation tended to be abundant in YH and BA.Based on the spatial and temporal variation in the composition and function of bacterioplankton,our findings provide a basis for understanding the theory of bacterioplankton community structure in the inner-bay habitat of the large yellow croaker in Sansha Bay. 展开更多
关键词 microbial ecology bacterioplankton large yellow croaker breeding area functional prediction
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Community composition,co-occurrence,and environmental drivers of bacterioplankton community in surface and 50-m water layers in the subarctic North Pacific
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作者 Quandong XIN Jufa CHEN +4 位作者 Changkao MU Xinliang WANG Wenjing LIU Tao JIANG Yan LI 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2023年第6期2309-2323,共15页
The Western Subarctic Gyre(WSG)is one of the two gyre-systems in the subarctic North Pacific known for high nutrient and low-chlorophyll waters.However,the bacterioplankton in marine water of this area,either in terms... The Western Subarctic Gyre(WSG)is one of the two gyre-systems in the subarctic North Pacific known for high nutrient and low-chlorophyll waters.However,the bacterioplankton in marine water of this area,either in terms of the taxonomic composition or functional structure,remains relatively unexplored.A total of 22 sampling sites from two water layers(surface water,SW and 50-m layer water,FW)were collected in this area.The physiochemical parameters of waters,Synechococcus,and bacterial density,as well as the bacterioplankton community composition and distribution pattern,were analyzed.The nutrient concentrations of DIN,DIP,and DSi,Chl-a concentration,and the average abundance of heterobacteria in FW were higher than those in SW.However,temperature and the average abundance of Synechococcus and pico-eukaryotes were higher in SW.A total of 3269 OTUs were assigned,and 2123OTUs were commonly shared;moreover,similar alpha diversity patterns were observed in both SW and FW.The bacterioplankton community showed significantly obvious correlation with salinity,DIP,DIN,and Chl a in both SW and FW.Proteobacteria,Cyanobacteria,Bacteroidota,Actinobacteriota,and Firmicutes were the main phyla while Synechococcus_CC9902,Psychrobacter,and Sulfitobacter were the dominant genera in each sampling site.Most correlations that happened between the OTUs in the cooccurrence network were positive and inter-module.Higher edges and graph density were found in SW,indicating that more correlations occurred,and the community was more complex in SW.This study provided novel knowledge on the bacterioplankton community structure and the correlation characteristics in WSG. 展开更多
关键词 Western Subarctic Gyre(WSG) marine water bacterioplankton community co-occurrence network
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Spatial and temporal dynamics of phytoplankton and bacterioplankton biomass in Sanya Bay, northern South China Sea 被引量:11
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作者 ZHOU Weihua LI Yao +5 位作者 CAI Chuanghua HUANG Liangmin WANG Hankui XU Jirong DONG Junde ZHANG Si 《Journal of Environmental Sciences》 SCIE EI CAS CSCD 2009年第5期595-603,共9页
The composition of phytoplankton and the dynamics of phytoplankton and bacterioplankton biomass (PB and BB, respectively) of Sanya Bay, South China Sea, were determined. A total of 168 species (67 genera) phytopla... The composition of phytoplankton and the dynamics of phytoplankton and bacterioplankton biomass (PB and BB, respectively) of Sanya Bay, South China Sea, were determined. A total of 168 species (67 genera) phytoplankton were identified, including BaciUariophyta (diatom, 128 species), Pyrrophyta (35 species), Cyanophyta (3 species), and Chrysophyta (2 species). Annual average zbundance of phytoplankton was 1.2 × 107 cells/m^3, with the highest abundance in autumn, and the lowest in summer. Annual average diversity index (H') and evenness (J) values were 3.96 and 0.70, respectively. Average chlorophyll-a was 2.5 mg/m^3, and the average PB was 124 mg C/m^3, with the highest value in autumn. Surface PB was higher than the bottom, except for summer. Annual mean bacterioplankton abundance and BB were 6.9 × 10^1l cells/m^3 and 13.8 mg C/m^3, respectively. The highest BB was found in summer, followed by winter, spring, and autumn. Surface BB was higher than bottom all year round. The spatial distribution patterns of PB and BB were very similar with the highest biomass in the estuary, and decreased seaward, primarily due to the terrestrial input from the Sanya River and influx of oceanic water. The main factor influencing PB and BB was dissolved inorganic nitrogen (DIN). Other factors such as temperature, which is above 22℃ throughout the year, had a negligible impact. The correlation between BB and PB was significant (P 〈 0.01). The annual average ratio of BB/PB was 0.12 (0.06-0.15). Phytoplankton primary production was one of the most important factors in controlling the distribution of bacterioplankton. 展开更多
关键词 BIOMASS PHYTOPLANKTON bacterioplankton Sanya Bay northern South China Sea
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Factors dominating bacterioplankton abundance and production in the Nordic seas and the Chukchi Sea in summer 2012 被引量:4
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作者 GAO Yuan HE Jianfeng +2 位作者 CHEN Min LIN Ling ZHANG Fang 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2017年第8期153-162,共10页
Abundance and production of bacterioplankton were measured in the Nordic seas and Chukchi Sea during the 5th Chinese Arctic Research Expedition in summer 2012. The results showed that average bacterial abundances rang... Abundance and production of bacterioplankton were measured in the Nordic seas and Chukchi Sea during the 5th Chinese Arctic Research Expedition in summer 2012. The results showed that average bacterial abundances ranged from 3.31×10^11 cells/m^3 to 2.25× 10^11 cells/m^3, and average bacterial productions (calculated by carbon) were 0.46 mg/(m^3·d) and 0.54 mg/(m^3·d) in the Nordic seas and Chukchi Sea, respectively. T-test result showed that bacterial abundances were significantly different between the Nordic seas and Chukchi Sea, however, no significant difference was observed regarding bacterial productions. Based on the slope of lg bacterial biomass versus lg bacterial production, bacterial communities in the Nordic seas and Chukchi Sea were moderately dominated by bottom-up control. Both Pearson correlation analysis and multivariable linear regression indicated that temperature had significant positive correlation with bacterial abundance in the Chukchi Sea, while no correlations with productions in both areas. Meanwhile, Chl a had positive correlations with both bacterial abundance and production in these two regions. As the temperature and Chl a keep changing in the future, we suggest that both bacterial abundance and production been hanced in the Chukchi Sea but weaken in the Nordic seas, though the enhancement will not be dramatic as a result of higher pressure of predation and viral lysis. 展开更多
关键词 bacterioplankton ABUNDANCE PRODUCTION Arctic Ocean environmental factors
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Comparison of Bacterioplankton Communities in Three Heavily Polluted Streams in China 被引量:4
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作者 HUANG Yi ZOU Li ZHANG ShuYing XIE ShuGuang 《Biomedical and Environmental Sciences》 SCIE CAS CSCD 2011年第2期140-145,共6页
Objective To compare the bacterioplankton communities in streams exposed to pollution of different types. Methods The bacterioplankton communities in three selected heavily polluted streams were investigated by using ... Objective To compare the bacterioplankton communities in streams exposed to pollution of different types. Methods The bacterioplankton communities in three selected heavily polluted streams were investigated by using terminal‐restriction fragment length polymorphism (T‐RFLP) analysis in combination with 16S rRNA gene clone library analysis. Results Both T‐RFLP and 16S rRNA gene clone library revealed a great difference in bacterioplankton community composition in the different streams. Conclusion This work might provide some new insights into bioremediation of heavily polluted streams. 展开更多
关键词 bacterioplankton community Terminal‐restriction fragment length polymorphism (T‐RFLP) STREAMS Clone library
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Bacterioplankton production in dilution zone of the Changjiang (Yangtze) Estuary 被引量:3
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作者 Liu Zilin 1,2 , Koshikawa Hiroshi 3, Ning Xiuren 1,2 , Shi Junxian 2, Cai Yuming 1,21.KeyLaboratoryofSubmarineGeosciences,StateOceanicAdministration,China2.SecondInstituteofOceanography,StateOceanicAdministration,Hangzhou310012,China3.Nationa 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2001年第1期131-139,共9页
The bacterioplankton production and bacterioplankton abundance were surveyed in dilution zone of the Changjiang Estuary and a mesocosm experimental device for enriched phosphate experiment and oil contaminated experim... The bacterioplankton production and bacterioplankton abundance were surveyed in dilution zone of the Changjiang Estuary and a mesocosm experimental device for enriched phosphate experiment and oil contaminated experiment was placed in the waters nearby Luhua Island during October 1997 and May 1998. The results showed that the average bacterioplankton production in spring was higher than that in autumn, the production at the surface water was higher than that at the bottom in the surveyed area; the higher values appeared in the middle of the area. The results from mesocosm experiment with adding phosphate and oil contaminated showed that the bacterioplankton production increased rising trend day by day during the experiment period. 展开更多
关键词 bacterioplankton production ESTUARY the Changjiang River
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The ecological risks of hydrogen peroxide as a cyanocide:its effect on the community structure of bacterioplankton 被引量:1
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作者 林立洲 闪锟 +4 位作者 熊倩 周起超 李林 甘南琴 宋立荣 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2018年第6期2231-2242,共12页
Microcystis blooms are an environmental and ecological concern that has received a serious attention. Hydrogen peroxide(H_2O_2) is an environment-friendly cyanocide that is commonly used to control Microcystis blooms.... Microcystis blooms are an environmental and ecological concern that has received a serious attention. Hydrogen peroxide(H_2O_2) is an environment-friendly cyanocide that is commonly used to control Microcystis blooms. While the ecological safety of H_2O_2 has been previously studied, its influence on bacterioplankton has not been investigated to date. In this study, we used mesocosm experiments to determine the influence of H_2O_2 on the dynamic changes of the community structure of bacterioplankton. By using deep-sequencing and metagenomics strategy we determined the community structures of phytoplankton and bacterioplankton assemblages that were dominated by M icrocystis at a highly eutrophic Dianchi Lake, China. The results showed that M icrocystis was more sensitive to H_2O_2 than other eukaryotic algae. More interestingly, application of H_2O_2 changed the community structure of bacterioplankton, evidenced by the emergence of F irmicutes as the dominant species in place of B acteroidetes and Proteobacteria. The H_2O_2 treatment resulted in the community of bacterioplankton that was primarily dominated by E xiguobacterium and Planomicrobium. Our results show that the abundance changed and the bacterioplankton diversity did not recover even after the concentration of H_2O_2 reached to the background level. Thus, the response of bacterioplankton must be considered when assessing the ecological risks of using H_2O_2 to control Microcystis blooms, because bacterioplankton is the key player that forms the basis of food web of aquatic environment. 展开更多
关键词 hydrogen PEROXIDE MICROCYSTIS BLOOM ecological risks bacterioplankton
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Terrestrial dissolved organic carbon consumption by heterotrophic bacterioplankton in the Huanghe River estuary during water and sediment regulation 被引量:1
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作者 ZHANG Mingliang YU Guanglei +4 位作者 WANG Fei LI Bin HAN Huizong QI Zhanhui WANG Tengteng 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2019年第3期1062-1070,共9页
Nearly 20%–50% of the annual terrestrial dissolved organic carbon(DOC)from the Huanghe(Yellow)River was transported to the estuary during the 5-14d of water and sediment regulation.The concentration of DOC increased ... Nearly 20%–50% of the annual terrestrial dissolved organic carbon(DOC)from the Huanghe(Yellow)River was transported to the estuary during the 5-14d of water and sediment regulation.The concentration of DOC increased sharply during the period of water and sediment regulation,which may promote the terrestrial DOC consumption by heterotrophic bacterioplankton.Water and sediment regulation provides an ideal condition for the study of terrestrial DOC consumption by heterotrophic bacterioplankton when terrestrial DOC increases sharply in rainy season,which may help to seek the fates of terrestrial DOC in the estuaries and coasts.In this study,the concentration and stable isotope of DOC,the biomass,growth,and respiration of heterotrophic bacterioplankton were determined.By the study,we found both average percent contribution of terrestrial DOC to the DOC pool and Contribution of terrestrial DOC to the carbon composition of heterotrophic bacterioplankton decreased as distance from the river mouth increased off shore,which was deceased from(39.2±4.0)%,(37.5±4.3)%to(30.3±3.9)%,(28.2±3.9)%respectively.255-484μg C/(L·d)terrestrial DOC was consumed by heterotrophic bacterioplankton.And 29%-45%terrestrial DOC consumed by heterotrophic bacterioplankton releasing as CO2 by respiration.Comparing with tropical estuary,terrestrial DOC consumed by heterotrophic bacterioplankton was lower in temperate estuary(this study).Temperature may limit the consumption of terrestrial DOC by heterotrophic bacterioplankton. 展开更多
关键词 TERRESTRIAL dissolved organic CARBON HETEROTROPHIC bacterioplankton CARBON stable ISOTOPE BIOGEOCHEMICAL cycles
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Phylogenetic diversity and phenotypic characterization of cultivable bacterioplankton isolated from polar oceans 被引量:1
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作者 ZENG Yinxin LI Huirong +2 位作者 YU Yong CHEN Bo ZHENG Tianling 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2007年第4期93-103,共11页
A set of 27 marine planktonic bacteria isolated from the polar regions was characterized by 16S rDNA sequencing and physiological and biochemical testing. More than half of these bacteria were positive for caseinase, ... A set of 27 marine planktonic bacteria isolated from the polar regions was characterized by 16S rDNA sequencing and physiological and biochemical testing. More than half of these bacteria were positive for caseinase, gelatinase and 13-glucosidase, and could utilize glucose, maltose or malic acid as carbon source for cell growth. Twelve isolates expressed nitrate reduction activities. Except for one antarctic isolate BSwlO175 belonging to Actinobacteria phylum, these isolates were classified as γ-Proteobacteria, suggesting that γ-Proteobacteria dominated in cultivable marine bacterioplankton at both poles. Genus Pseudoalteromonas was the predominant group in the Chukchi Sea and the Bering Sea, and genus ShewaneUa dominated in cultivable bacterioplankton in the Prydz Bay. With sequence similarities above 97%, genus Psychrobacter was found at both poles. These 27 isolates were psychrotolerant, and significant 16S rDNA sequence similarities were found not only between arctic and antarctic marine bacteria ( 〉 99% ), but also between polar marine bacteria and bacteria from other aquatic environments ( ≥ 98.8% ), including temperate ocean, deep sea, pond and lake, suggesting that in the polar oceans less temperature-sensitive bacteria may be cosmopolitan and have a bipolar, even global, distribution at the species level. 展开更多
关键词 bacterioplankton diversity ARCTIC ANTARCTIC
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The effect of cylindrospermopsin on the bacterioplankton community:a microcosm experiment on water from Dishui Lake,Shanghai,China 被引量:1
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作者 Sicheng YIN Ruohan HUANG +4 位作者 Erik JEPPESEN Lijing CHEN Liqing WANG Xin FANG Wei ZHANG 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2022年第5期1829-1839,共11页
Eutrophication and climate warming have intensified the global expansion of invasive cyanobacteria such as Cylindrospermopsis spp.and Chrysosporum spp.Cylindrospermopsin(CYN)produced by species of the latter two gener... Eutrophication and climate warming have intensified the global expansion of invasive cyanobacteria such as Cylindrospermopsis spp.and Chrysosporum spp.Cylindrospermopsin(CYN)produced by species of the latter two genera may harm phytoplankton,zooplankton,and fishes.However,effects of CYN on the bacterioplankton community have not been studied.Based on high-throughput sequencing,we explored the effect of CYN on the structure and function of the bacterioplankton community by adding pure CYN to in-situ water collected from a brackish coastal shallow lake:Dishui Lake,China.We found that most bacterioplankton taxa had a certain tolerance potential to CYN,but that high concentrations of CYN(40μg/L)caused a significant decrease in microbial abundance and functional groups.Of the dominant phyla,Actinobacteria had the strongest tolerance to CYN.Network analysis indicated that CYN caused shifts in the community structure of the bacterioplankton,reducing community stability and structural complexity.High CYN concentrations also reduced the correlation between the different bacterioplankton groups,and the abundances of some bacterial taxa associated with the denitrification function and the process of carbon transfer in the microbial food web were inhibited.Our study provide s new insight into the response of the bacterioplankton communities to harmful algal toxins produced by cyanobacteria. 展开更多
关键词 CYLINDROSPERMOPSIN bacterioplankton denitrification function carbon cycles Dishui Lake
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The Effects of Ocean Acidity and Elevated Temperature on Bacterioplankton Community Structure and Metabolism 被引量:1
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作者 Nam Siu Jude K. Apple Craig L. Moyer 《Open Journal of Ecology》 2014年第8期434-455,共22页
By the end of the 21st century, mean sea surface temperatures are expected to increase 4?C, while atmospheric CO2 concentrations are predicted to triple causing seawater to become acidic. These compounding effects wil... By the end of the 21st century, mean sea surface temperatures are expected to increase 4?C, while atmospheric CO2 concentrations are predicted to triple causing seawater to become acidic. These compounding effects will undoubtedly have major consequences for the organisms and processes in the oceans. Bacterioplankton play a vital role in the marine carbon cycle and the oceans’ ability to sequester CO2. We utilized pCO2 perturbation experiments to investigate the effects of ocean acidity and elevated temperature on bacterioplankton community structure and metabolism. Terminal-restriction fragment length polymorphism (T-RFLP) of small subunit ribosomal (SSU) genes revealed that bacterioplankton incubated in lower pH conditions exhibited a reduction of species richness, evenness, and overall diversity, relative to those incubated in ambient pH conditions. Non-metric multidimensional scaling (MDS) of T-RFLP data resulted in clustering by pH suggesting that pH influenced the structure of these communities. Shifts in the dominant members of bacterioplankton communities incubated under different pH were observed in both T-RFLP and SSU clone library analyses. Both ambient and low pH communities were dominated by Gammaproteobacteria and Alphaproteobacteria, although abundance of Alphaproteobacteria increased in communities incubated at lower pH. This was expressed by the gamma to alpha ratio dropping from ~9 to 4, respectively. In general, the representative taxa from these two classes were distinctly different between the treatments, with a few taxa found to be persistent in both treatments. Changes in the structure of bacterioplankton communities coincided with significant changes to their overall metabolism. Bacterial production rates decreased, while bacterial respiration increased under lower pH conditions. This study highlights the ability of bacterioplankton communities to respond to ocean acidification both structurally and metabolically, which may have significant implications for their ecological function in the marine carbon cycle and the ocean’s response to global climate change. 展开更多
关键词 OCEAN ACIDIFICATION Climate Change bacterioplankton Community Structure
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Molecular analyses of bacterioplankton communities with highly abundant Vibrio clades: a case study in Bohai Sea coastal waters
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作者 WANG Shuping ZHANG Yuan +4 位作者 HE Jia JIA Xiaobo LIN Jianing LI Meng WANG Qinglin 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2019年第5期1638-1648,共11页
We investigated the bacterioplankton abundance, community composition and the associated Vibrio clades of natural seawater in Bohai Sea coastal waters. Seawater samples (10 L in triplicate) were collected at 0.5, 3, a... We investigated the bacterioplankton abundance, community composition and the associated Vibrio clades of natural seawater in Bohai Sea coastal waters. Seawater samples (10 L in triplicate) were collected at 0.5, 3, and 5 m depths near the coastal aquaculture zone of the Bohai Sea on May 12, 2016. Real-time PCR and 16S rRNA gene amplicon high-throughput sequencing methods were employed by which 485 operational taxonomic units (OTUs) at a 97% sequence similarity level were generated. Gammaproteobacteria, Alphaproteobacteria, and Bacteroidetes were the most abundant groups, accounting for 49.5%, 23.5%, and 18.9% of the total assemblage, respectively. Obvious variations in Pseudoalteromonas, Vibrio, and Octadecabacter , which were the most abundant genera, could be observed among diff erent samples. Notably, the results of Vibrio -specifi c real-time PCR indicated that Vibrio had extremely high 16S rRNA gene copy numbers. The 16S rRNA gene sequencing results across all the samples also indicated that they occupied a large proportion of the total assemblage. Both the alpha diversity and major bacterioplankton group Pseudoalteromonas had significant correlations with the concentration of PO4^3-. Overall, studies on bacterioplankton communities with highly abundant Vibrio clades can provide interesting insight into the microbial function and health assessment of the Bohai Sea coastal ecosystem. 展开更多
关键词 Bohai Sea bacterioplankton VIBRIO 16S RRNA ILLUMINA MiSeq
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BACTERIOPLANKTON SECONDARY PRODUCTION ESTIMATES FOR ARTIFICIALLY FERTILIZED SHRIMP POND
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作者 卢敬让 李德尚 张鸿雁 《Chinese Journal of Oceanology and Limnology》 SCIE CAS CSCD 1997年第1期92-96,共5页
Experiments were conducted from June to September, 1995 in a controlled integrated culture pond-enclosure ecosystem.The principal objective of this study was to quantify the rate of heterotrophic bacterioplankton prod... Experiments were conducted from June to September, 1995 in a controlled integrated culture pond-enclosure ecosystem.The principal objective of this study was to quantify the rate of heterotrophic bacterioplankton production in situ in a fertilization pond ecosystem.This paper presents a method by which bacterial production was estimated through incubation in situ and measurement of increased bacterial abundance with time. Bacterial growth rates. production and tumover per day during the periods of culture were estimated. The influence of zooplankton grazing, substrate limiting and water temperature on the bacterial growth rates and production were studied also. 展开更多
关键词 bacterioplankton SECONDARY prodution ENCLOSURE ECOSYSTEM seawater POND
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Drivers of coastal bacterioplankton community diversity and structure along a nutrient gradient in the East China Sea
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作者 何佳颖 王凯 +4 位作者 熊金波 郭安南 张德民 费岳军 叶仙森 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2018年第2期329-340,共12页
Anthropogenic nutrient discharge poses widespread threats to coastal ecosystems and has increased environmental gradients from coast to sea. Bacterioplankton play crucial roles in coastal biogeochemical cycling, and a... Anthropogenic nutrient discharge poses widespread threats to coastal ecosystems and has increased environmental gradients from coast to sea. Bacterioplankton play crucial roles in coastal biogeochemical cycling, and a variety of factors af fect bacterial community diversity and structure. We used 16 S r RNA gene pyrosequencing to investigate the spatial variation in bacterial community composition(BCC) across five sites on a coast-of fshore gradient in the East China Sea. Overall, bacterial alpha-diversity did not diff er across sites, except that richness and phylogenetic diversity were lower in the of fshore sites, and the highest alpha-diversity was found in the most landward site, with Chl-abeing the main factor. BCCs generally clustered into coastal and of fshore groups. Chl-a explained 12.3% of the variation in BCCs, more than that explained by either the physicochemical(5.7%) or spatial(8.5%) variables. Nutrients(particularly nitrate and phosphate), along with phytoplankton abundance, were more important than other physicochemical factors, co-explaining 20.0% of the variation in BCCs. Additionally, a series of discriminant families(primarily affiliated with Gammaproteobacteria and Alphaproteobacteria), whose relative abundances correlated with Chl-a, DIN, and phosphate concentrations, were identified, implying their potential to indicate phytoplankton blooms and nutrient enrichment in this marine ecosystem. This study provides insight into bacterioplankton response patterns along a coast-of fshore gradient, with phytoplankton abundance increasing in the of fshore sites. Time-series sampling across multiple transects should be performed to determine the seasonal and spatial patterns in bacterial diversity and community structure along this gradient. 展开更多
关键词 bacterioplankton PYROSEQUENCING nutrient gradient phytoplankton abundance dominant factor BIOINDICATOR
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Fish-mediated changes in bacterioplankton community composition: an in situ mesocosm experiment
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作者 罗丛强 易春龙 +1 位作者 倪乐意 过龙根 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2018年第2期341-350,共10页
We characterized variations in bacterioplankton community composition(BCC) in mesocosms subject to three different treatments. Two groups contained fish(group one: Cyprinus carpio; group two: Hypophthalmichthys molitr... We characterized variations in bacterioplankton community composition(BCC) in mesocosms subject to three different treatments. Two groups contained fish(group one: Cyprinus carpio; group two: Hypophthalmichthys molitrix); and group three, the untreated mesocosm, was the control. Samples were taken seven times over a 49-d period, and BCC was analyzed by PCR-denaturing gradient gel electrophoresis(DGGE) and real-time quantitative PCR(q PCR). Results revealed that introduction of C. carpio and H. molitrix had a remarkable impact on the composition of bacterioplankton communities, and the BCC was significantly diff erent between each treatment. Sequencing of DGGE bands revealed that the bacterioplankton community in the different treatment groups was consistent at a taxonomic level, but differed in its abundance. H. molitrix promoted the richness of Alphaproteobacteria and Actinobacteria, while more bands affiliated to Cyanobacteria were detected in C. carpio mesocosms. The redundancy analysis(RDA) result demonstrated that the BCC was closely related to the bottom-up(total phosphorus, chlorophyll a, phytoplankton biomass) and top-down forces(biomass of copepods and cladocera) in C. carpio and control mesocosms, respectively. We found no evidence for top-down regulation of BCC by zooplankton in H. molitrix mesocosms, while grazing by protozoa(heterotrophic nanoflagellates, ciliates) became the major way to regulate BCC. Total bacterioplankton abundances were significantly higher in C. carpio mesocosms because of high nutrient concentration and suspended solids. Our study provided insights into the relationship between fish and bacterioplankton at species level, leading to a deep understanding of the function of the microbial loop and the aquatic ecosystem. 展开更多
关键词 bacterioplankton community composition(BCC) PCR-DGGE qPCR analysis of similarities (ANOSIM) redundancy analysis(RDA)
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The Relationship between Salinity and Bacterioplankton in Three Relic Coastal Ponds (Macchiatonda Wetland, Italy)
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作者 Matteo Evangelisti Domenico D’Amelia +2 位作者 Gustavo Di Lallo Maria Cristina Thaller Luciana Migliore 《Journal of Water Resource and Protection》 2013年第9期859-866,共8页
The great environmental importance of wetlands is linked to the high biodiversity of flora and fauna they support, so that the international Ramsar Convention focused on these areas and highlighted the need to preserv... The great environmental importance of wetlands is linked to the high biodiversity of flora and fauna they support, so that the international Ramsar Convention focused on these areas and highlighted the need to preserve them. The bacterial communities that thrive in these ecosystems play a key role in regulating the local biogeochemical processes and yet their distribution, abundance and dynamics are poorly known. This work is aimed to study the bacterial assemblages over a year long, to contribute to the understanding of the natural processes occurring in wetlands at variable salinity. The knowledge of bacterial groups, species or assemblages can provide a useful bioindicator for conservation and restoration efforts. Macchiatonda Natural Reserve (Santa Severa, Rome, Italy) is a relic ecosystem, once found along the entire Tyrrhenian coast. This wetland encompasses three coastal ponds with different salinity, where both peculiar vegetation and highly diverse migratory and resident avifauna can be found. This ancient system has been scarcely investigated and nothing is known about its microbial community. The molecular metagenomic analyses performed to investigate the salinity/bacterioplankton relationship, highlighted differences in the bacterial structure, between ponds and seasons. Analogous trends in SSCP profiles, Shannon Index, and bacterial composition (16S) were observed in the two saltier ponds, whereas the entire set of results was different for the less salty one. The species diversity in the three ponds varied according the salinity gradient, with the maximum diversity corresponding to a salt concentration range between 20 and 30. At higher and lower salinity, the microbial diversity lowers, according to the “Intermediate Disturbance Hypothesis”. 展开更多
关键词 bacterioplankton COASTAL PONDS Diversity SALINITY SSCP WETLANDS
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Coupling virio-and bacterioplankton populations with environmental variable changes in the Bohai Sea
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作者 Caixia Wang Lin Wu +3 位作者 Yibo Wang James S.Paterson James G.Mitchell Xiaoke Hu 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2020年第6期72-83,共12页
Uncovering the role of environmental factors and finding critical factors which harbor significant fractions in governing microbial communities remain key questions in coastal marine systems.To detect the interactions... Uncovering the role of environmental factors and finding critical factors which harbor significant fractions in governing microbial communities remain key questions in coastal marine systems.To detect the interactions between environmental factors and distributions of virio-and bacterioplankton in trophic coastal areas,we used flow cytometry to investigate the abundance of virio-and bacterioplankton covering 31 stations in the Bohai Sea of China.Our results suggested that the average abundance of total virus(TV)in winter(~2.29×108 particles/mL)was slightly lower than in summer(~3.83×108 particles/mL).The mean total bacterial abundance(TB)was much lower in winter(~2.54×107 particles/mL)than in summer(~5.43×107 particles/mL).Correlation analysis via redundancy analysis(RDA)and network analysis among virioplankton,bacterioplankton and environmental factors revealed that the abundances of viral and bacterial subpopulations depend on environmental factors.In winter,only temperature significantly influenced the abundances of virio-and bacterioplankton.In summer,in addition to temperature,both salinity and nutrient(SiO2)had a remarkable impact on the distribution of virioand bacterioplankton.Our results showed a clear seasonal and trophic pattern throughout the whole water system,which revealed that temperature and eutrophication may play crucial roles in microbial distribution pattern. 展开更多
关键词 VIRIOPLANKTON bacterioplankton flow cytometry network Bohai Sea
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Diversity and distribution of bacterioplankton in the coastal upwelling waters off Hainan Island,China
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作者 Fahui Gong Qixing Ji +2 位作者 Guihao Li Kedong Yin Jun Gong 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2022年第3期76-85,共10页
The diversity,community composition and 16 S rRNA gene abundance of bacterioplankton along a transect across an upwelling area off the eastern coast of Hainan Island(the Qiongdong upwelling)were investigated in August... The diversity,community composition and 16 S rRNA gene abundance of bacterioplankton along a transect across an upwelling area off the eastern coast of Hainan Island(the Qiongdong upwelling)were investigated in August of 2016 using high throughput sequencing and quantitative PCR assay of 16 S rRNA genes.Compared with the offshore stations,the inner-shelf stations had higher bacterial gene abundance(up to 3 fold)and operational taxonomic unit richness,a result of the influence of upwelled and fresher waters.Overall,a majority of the reads were affiliated with Gammaproteobacteria(11%-74%)and Alphaproteobacteria(14%-43%).The structure of the bacterial community was significantly affected by salinity,dissolved oxygen,NO_(3)^(-) and NH_(4)^(+),which also defined the physicochemical features of the upwelled waters.Horizontally,the relative abundances and gene abundances of Rhodobacteraceae,SAR86,Cyanobacteria and Bacteroidetes in eutrophic zone decreased from the inner to outer shelves and slope,whereas Alteromonas,Vibrio and Oceanospirillaceae exhibited an opposite trend.This study stresses the riverine influence on the oceanographic condition and spatial variability of bacterioplankton diversity and distribution in the Qiongdong upwelling. 展开更多
关键词 16S rRNA bacterioplankton coastal upwelling Hainan Island
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Development of a 16S r RNA gene-based microarray for the detection of marine bacterioplankton community
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作者 ZHAO Wei WANG Jingjing +1 位作者 LIANG Yajie HUANG Zhiyong 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2017年第10期106-114,共9页
A better understanding of bacterioplankton community shifts following change in marine environments is critical to predict the marine ecosystem function. In order to get a snapshot of the microbial taxonomy profiling ... A better understanding of bacterioplankton community shifts following change in marine environments is critical to predict the marine ecosystem function. In order to get a snapshot of the microbial taxonomy profiling of a wide range marine area, a quick, convenient and low cost method would be favorable. In this study, we developed a 16S rRNA gene-based microarray using ARB software, which contained 447 probes targeting 160 families of marine bacteria. The specificity, sensitivity and quantitative capability of this microarray were assessed by single cloned16S rRNA genes. The reliability of this microarray was tested by eight environmental samples. The results showed that the microarray was specific, only 1.16% false results were detected in five single-clone hybridization tests. The microarray could detect DNA samples as few as 1 ng/μL and the signal intensity could reflect the relative abundance of the bacteria in the range of 1 ng/μL to 100 ng/μL of DNA concentration. Hybridization with environmental samples showed that it can discriminate bacterioplankton communities by sites and time. High throughput sequencing results from the eight samples confirmed the hybridization results. It indicated that this developed microarray could be used as a convenient tool to monitor the bacterioplankton community in marine environment. 展开更多
关键词 microarray bacterioplankton community 16S rRNA gene marine environment
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Bacterioplankton, Picoeukaryotes and Synechococcus Distribution Associated with Seagrass in South Coast of Hainan Island, China
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作者 Dingtian Yang Xiujuan Shan Sumin Liu 《Natural Resources》 2014年第9期454-461,共8页
Seagrass ecosystem is a potential bank for carbon sink. In the paper, we compared the distribution of bacterioplankton, picoeukaryotes and Synechococcus in seagrass ecosystem in Xincun Bay and coral ecosystem in Sanya... Seagrass ecosystem is a potential bank for carbon sink. In the paper, we compared the distribution of bacterioplankton, picoeukaryotes and Synechococcus in seagrass ecosystem in Xincun Bay and coral ecosystem in Sanya Bay and found that quantity of bacterioplankton was higher in seagrass ecosystem, and picoeukaryotes had similar distribution pattern with that of bacterioplankton. However, quantity of Synechococcus distribution was higher in coral ecosystem and higher in Sanya Bay. Comparing the unit of quantity of bacterioplankton, picoeukaryotes and Synechococcus in Xincun Bay with that of Sanya Bay, open sea of the South China Sea and Indian Ocean, results showed that the highest quantity of bacterioplankton was in Xincun Bay, and the lowest was in open sea of the South China Sea. The quantity of picoeukaryotes had the similar pattern with that of bacterioplankton. Pattern of Synechococcus quantity was different, which was the highest in Sanya Bay. These results indicated that seagrass ecosystem was more suitable for bacterioplankton and picoeukaryotes growth. 展开更多
关键词 SEAGRASS bacterioplankton PICOEUKARYOTES SYNECHOCOCCUS
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