Effects of nitrogen and phosphorus additions on soil microbial community structure and ecological processes in the farmland of Chinese Loess Plateau

Microorganisms regulate the responses of terrestrial ecosystems to anthropogenic nutrient inputs.The escalation of anthropogenic activities has resulted in a rise in the primary terrestrial constraining elements,namely nitrogen(N)and phosphorus(P).Nevertheless,the specific mechanisms governing the influence of soil microbial community structure and ecological processes in ecologically vulnerable and delicate semi-arid loess agroecosystems remain inadequately understood.Therefore,we explored the effects of different N and P additions on soil microbial community structure and its associated ecological processes in the farmland of Chinese Loess Plateau based on a 36-a long-term experiment.Nine fertilization treatments with complete interactions of high,medium,and low N and P gradients were set up.Soil physical and chemical properties,along with the microbial community structure were measured in this study.Additionally,relevant ecological processes such as microbial biomass,respiration,N mineralization,and enzyme activity were quantified.To elucidate the relationships between these variables,we examined correlation-mediated processes using statistical techniques,including redundancy analysis(RDA)and structural equation modeling(SEM).The results showed that the addition of N alone had a detrimental effect on soil microbial biomass,mineralized N accumulation,andβ-1,4-glucosidase activity.Conversely,the addition of P exhibited an opposing effect,leading to positive influences on these soil parameters.The interactive addition of N and P significantly changed the microbial community structure,increasing microbial activity(microbial biomass and soil respiration),but decreasing the accumulation of mineralized N.Among them,N24P12 treatment showed the greatest increase in the soil nutrient content and respiration.N12P12 treatment increased the overall enzyme activity and total phospholipid fatty acid(PLFA)content by 70.93%.N and P nutrient contents of the soil dominate the microbial community structure and the corresponding changes in hydrolytic enzymes.Soil microbial biomass,respiration,and overall enzyme activity are driven by mineralized N.Our study provides a theoretical basis for exploring energy conversion processes of soil microbial community and environmental sustainability under long-term N and P additions in semi-arid loess areas.

Effects of Bamboo Charcoal-based Biochar on Soil Enzyme Activity and Microbial Community Structure

[Objectives]This study was conducted to reveal the effects of bamboo charcoal-based biochar(or bamboo charcoal for short)on soil enzyme activity and microbial community structure.[Methods]The field experiment was carried out at the Modern Agriculture Demonstration Base of Gaoping Village,Gaoping Town,Suichang County,Zhejiang Province.Bamboo charcoal was applied at four different levels:T_(0)(no bamboo charcoal),T_(1)(1125 kg/hm^(2)bamboo charcoal),T_(2)(2250 kg/hm^(2)bamboo charcoal)and T_(3)(3375 kg/hm^(2)bamboo charcoal).Soil physicochemical properties and enzyme activities in different treatments were measured.[Results]The soil fungal,bacterial and actinomycete populations increased significantly in the soils surrounding capsicum roots.The bacterial population,fungal population and fungus/bacterium ratio peaked in Treatment T_(2),up to 7.32×10^(6)cfu/g,2.65×10^(4)cfu/g and 0.36×10^(-2),respectively.The effect of bamboo charcoal in promotingβ-glucoside,catalase,acid phosphatase and sucrase activities was T_(2)>T_(3)>T_(1)>T_(0).With bamboo charcoal increasing,the bacterium population,fungus population,fungus/bacterium ratio,β-glucoside,catalase,acid phosphatase and sucrase activities all increased at first and then decreased.T_(2)treatment showed the best effects in improving soil physicochemical properties and microbial community structure.[Conclusions]Bamboo charcoal significantly improves soil enzyme activity and increases soil microbial population,and thus has important positive effects on the soil ecosystem.

Correlation Between the Animal Community Structure and Environmental Factors in Dongbei Cave and Shuijiang Cave of Guizhou Province

Mollusks, arthropods and chordates which were visible to the naked eye were observed and collected in Dongbei and Shuijiang caves of Libo county five times between February and July from 2002 to 2005. Four hundred and forty samples from Dongbei Cave were classified into three phyla, five classes, 10 orders, 20 families and 39 species or groups of species. Four hundred and ninety-eight samples from Shuijiang Cave were classified into three phyla, six classes, 11 orders, 20 families and 25 species or groups of species. Six animal communities were identified in the light belt of the two caves according to their species types and numbers of individuals in the light belt of two cave. The communities which have the highest values of species richness community diversity, maximum diversity, evenness, dominance and community similarity are respectively： B （4. 1059）, H （2.4716）, B （3.3322）, E （0.9042）, C （0.3442） and A - C （0. 5251）. The community diversity and correlation of environmental factors were also studied. The temperature, humidity, content of CO2 and N2, content of organic matter and some inorganic salts in soil were analyzed by Pearson correlation. The results showed that the content of organic matter in soil is positively related to species number, species richness and maximum community diversity, with correlations of 0. 885, 0.909, 0. 868 respectively （two-tailed significance test, P ≤ 0. 05）, and significantly positively related to diversity, with the coefficient of 0.611, （two-tailed significance test, P ≤ 0. 1）. This suggests that the content of organic matter in soil is one of the important elements influencing the community variation of cave animals. Outside the cave, temperature and humidity are important factors impacting on community diver- sity. As the temperature in all seasons in the cave is stable and the humidity is always high （above 90% ）, the temperature and humidity have weak correlation to community diversity in caves.

The Community Structure of Benthic Macroinvertebrates Associated with Spartina alterniflora in the Yangtze Estuary, in China

Benthic macroinvertebrate communities in Spartina alterniflora zones in the Yangtze Estuary, in China, were investigated seasonally in 2005, and their structure and biodiversity were analyzed. Twenty-one species were identified, across four Classes; 10 species of Crustacea, five species of Polychaeta, five species of Gastropoda, and one species of Lamellibranchia. Dominant species included： Assiminea sp., Notomastus latericeus, Cerithidea largillierl, Gtauconome chinensi and Gammaridae sp. Functional groups were comprised of a phytophagous group and a detritivorous group. The average density of all benthic macroinvertebrates was 650.5 ±719.2 inds/m^2 in the survey area. The high value of the standard deviation of the average density was a result of abundant Assiminea sp. at Beihu tidal flats. The average density of macroinvertebrates from Beihu tidal flat, Chongming Dongtan to Jinshanwei tidal flat decreased gradually. There was significant difference between compositions and abundance of macroinvertebrates along the estuary gradient （P 〈 0.05）. The density and biodiversity were highest in summer and lowest in winter. The mean biomass of macroinvertebrates was 20.8 ± 6.1 g/m^2. Biomass changed seasonally in the same way as density, with the change in biomass being： summer （Aug.） 〉autumn （Oct.） 〉spring （Apr.） 〉 winter （Dec.）. A BIO-ENV analysis showed that the mean grain size of sediment, height of Spartina and salinity were the ma- jor factors which affected the structure of the macroinvertebrate community. Variations in the community structure were probably caused by the population dynamics of S. alterniflora along with the variation in sampling time and location.

Soil nematode community structure on the northern slope of Changbai Mountain, Northeast China

Soil nematode communities were investigated in the Changbai Mountain in Broad-leaved Korean Pine forest, Korean Pine and spruce-fix mixed forest, Dark Coniferous forest, Erman＇s birch forest and Alpine tundra along different altitude gradients from 762 m to 2 200 m a.s.l. Soil animal samples were collected from the litter layer and the soil depth of 0-5 cm, 5-10 cm and 10-20 cm at each site in the spring of 2001 and 2002. In total 27 nematode families and 60 genera were observed. The dominant genera were Plectus Bastian and Tylenchus Bastian and most of them live in litter layer. The total number of soil nematode was significantly correlated with soil moisture （r=0.357; p〈0.01）. Nematodes were classified in bacterivores, fungivores, plant parasites, omnivores-predators, and omnivores according to known feeding habitats or stoma and esophageal morphology. Species richness of fungivorous nematode was higher than others in different vegetation communities and soil depths. The total number of soil nematode and trophic groups varied significantly （o〈0.05） in response to different soil depths. The fungivore/bacterivore ratio （F/B） and the ratio of （fungivores ＋ bacterivores）/plant-parasites （WI） also changed significantly （p〈0.05） in different soil depths. In conclusion, soil moisture is proved to be one of the most important variables affecting nematode density and trophic composition, and the altitude gradient does not significantly affect the ecological indices of soil nematode such as trophic diversity （TD） and the Shannon index （H＇）.

Primary Succession of Algal Community Structure in Desert Soil

The microbiotic crust study is among new focuses in investigating on the desertification control. Based on determination of algal crusts with different successive ages (4-, 8-, 17-, 34-, 42-year-old) and unconsolidated sand in the desert area, species composition and clustering analyses were carried out in this study. Results on successional orientation revealed that (1) the abundance of Cyanophyta, specially of Scytonema javanicum gradually decreased; (2) the abundance of Chlorophyta, Bacillariophyta and a species of Cyanophyta, Phormidium tenue increased; (3) the biodiversity increased gradually with the community succession; and (4) biomass of microalgae increased at the early stage, but decreased at the later stage due to the abundance of lichens and mosses. But, the speed of natural succession was so slow that the community-building species was still the first dominant species after 42 years, except that its dominant degree decreased just slightly. However, successive speed and trend were affected by water, vegetation coverage, terrain, time and soil physico-chemical properties as well, especially Mn content in the soil appeared to have a threshold effect.

Bio-desilication of rutile concentrate and analysis of community structure in bio-desilication reactor

The original strain HY-7 was isolated from the bauxite mine drainage（BMD） taken from a reservoir in Sanmenxia Mine,Henan Province,China.The optimum temperature and pH for the growth of strain HY-7 were 30 ℃ and 7.0,respectively.The optimum UV radiating time was 20 s and the positive mutation rate was 23.0%.The growth curves show that strain HY-7 needs144 h to reach the stationary phase after its mutagenesis,which is 24 h earlier than that of the original strain.Sequence homology analysis indicated that this community consisted of mainly two branches：one sharing high homology with Paenibacillus stellifer and the other sharing high homology with Sporolactobacillus laevolacticus.The experimental results showed that the TiO2 grade of mtile concentrate increased from 78.21%to 91.80%and the recovery of TiO2 reached 95.24%after 7 d of bioleaching.The bio-desilication process can not only effectively improve the TiO2 grade of rutile concentrate but also meet the requirements of environmental protection.

Soil Microbial Community Structure in Diverse Land Use Systems:A Comparative Study Using Biolog,DGGE,and PLFA Analyses

Biolog, 16S rRNA gene denaturing gradient gel electrophoresis （DGGE）, and phospholipid fatty acid （PLFA） analyses were used to assess soil microbial community characteristics in a chronosequence of tea garden systems （8-, 50-, and 90- year-old tea gardens）, an adjacent wasteland, and a 90-year-old forest. Biolog analysis showed that the average well color development （AWCD） of all carbon sources and the functional diversity based on the Shannon index decreased （P 〈 0.05） in the following order： wasteland 〉 forest 〉 tea garden. For the DCCE analysis, the genetic diversity based on the Shannon index was significantly lower in the tea garden soils than in the wasteland. However, compared to the 90-year-old forest, the tea garden soils showed significantly higher genetic diversity. PLFA analysis showed that the ratio of Gram positive bacteria to Cram negative bacteria was significantly higher in the tea garden soils than in the wasteland, and the highest value was found in the 90-year-old forest. Both the fungal PLFA and the ratio of fungi to bacteria were significantly higher in the three tea garden soils than in the wasteland and forest, indicating that fungal PLFA was significantly affected by land-use change. Based on cluster analysis of the soil microbial community structure, all three analytical methods showed that land-use change had a greater effect on soil microbial community structure than tea garden age.

Phytoplankton Community Structure and Its Spatial Distribution along Anhui-Jiangsu Reaches of the Yangtze River in Autumn 2009

[Objective] Surveys of phytoplankton were taken during the autumn of 2009 along Anhui-Jiangsu reaches of the Yangtze River to understand the species com- position and their spatial distributions. [Method] Phytoplankton species, their quanti- ties, biomass and the Mcnaughton＇s dominance indices were all measured and their spatial distribution characteristics were determined using cluster analysis. [Result] There were 27 species, belonging to 5 phyla, namely Chlorophyta, Bacillariophyta, Cyanophyta, Euglenophyta and Cryptophyta, of phytoplankton collected and identified from the surveys. Results showed that Bacillariophyta was the predominant phyto- plankton with 16 species collected which accounted for 59.3% of the total species identified. The number of species collected belonging to Chlorophyta, Cyanophyta, Cryptophyta and Euglenophyta were 6, 2, 2, and 1, accounting for 22.2%, 7.4%, 7.4% and 3.7% of the total number identified, respectively. At the species level, the predominant species were Fragilaria crotonensis, Melosira italica, Navicula crypto- cephala, Cyclotella striata and Chroomonas acuta. Phytoplankton abundance was ranging from 5.68×10^4 to 7.08×10^4 cells/L with its average of 6.01×10^4 cells/L. Phyto- plankton biomass was ranging from 30.43 to 34.73 μg/L with its average of 32.46 μg/L. Compared with the previous reports, the number of phytoplankton species was decreased but its abundance and biomass was increased along the Jiangsu reach of the Yangtze River. However, Bacillariophyta species were still the predominant species and the phytoplankton community structure had not significantly changed from the previous studies. [Conclusion] These results might be explained as that the water quality in the Yangtze River was deteriorated but had not come to the worst. The results of similarity analysis gave two clusters of phytoplankton community as Nanjing, Wuhu and Jiangyin sampling sites were clustered into one group and Tongling and Anqing were clustered into another group.

Effects of sediment dredging on water quality and zooplankton community structure in a shallow of eutrophic lake

Effects of suction dredging on water quality and zooplankton community structure in a shallow of eutrophic lake, were evaluated. The results showed that a decreasing trend for levels of phosphorus, organic matter, total suspended solids, Chlorophyll a and Secchi transparency in the water column was found, while levels of water depth, electrical conductivity, total dissolved solids and NO3^--N concentration increased markedly post-dredging. The effects of dredging on dissolved oxygen, pH value and temperature were almost negligible. The zooplankton community structure responded rapidly to the environmental changes caused mainly by dredging. As a result, the abundance of rotifers decreased, while the density of zooplanktonic crustaceans increased markedly. The representative taxa were Brachionus angularis, B. budapestinensis, B. diversicornis, Synchaeta spp. and Neodiaptomus schmackeri. A distinct relationship between zooplankton taxa composition and their environment, unraveled by a redundancy analysis, indicating that the measured environment contributed to the variations in the zooplankton community structure to some extent. The first four synthetic environmental variables explained 51.7% of the taxonomic structure. Therefore, with the reduction of internal nutrient load and a shift in dominance by less eutrophic species, it inferred that dredging might be one of effective measures for environmental improvements of such lakes.

Comparative study of microbial community structure in different filter media of constructed wetland

Comparisons of microbial community structure, in eight filter media of zeolites, anthracite, shale, vermiculite, ceramic filter media, gravel, steel slag and bio-ceramic, were undertaken by analyzing the phospholipid fatty acid （PLFA） composition. A total of 20 fatty acids in the range of C18to C20 were determined but only 13 PLFAs were detected in steel slag. They consist of saturated fatty acids, branched fatty acids, monounsaturated fatty acids, and polyunsaturated fatty acids. The variation of fatty acids was revealed in the relative proportions of these fatty acids in different media. The aerobic prokaryotes were the predominant group in all media. The PLFA composition showed significant differences among the eight different media by Tukey＇s honestly test. It was found that steel slag was significantly different in the microbial community as compared to other filter media, probably due to its alkaline effluent. Steel slag alone is probably not a good choice of substratum in constructed wetlands. The principle components analysis （PCA） showed that zeolites, bio-ceramic, shale and vermiculite had a similar microbial community structure while steel slag and ceramic filter media were distinct from other media.

Macrobenthos Community Structure and Its Relations With Environmental Factors in Three Reservoirs in Tianjin

[Objective] The aim was to research macrobenthos community structure and its relations with environmental factors in three reservoirs. [Method] Benthic diversity and water quality of Yuqiao Reservoir, Beidagang Reservoir and Er- wangzhuang Reservoir were investigated in May, July and September 2011, respec- tively. []Result] Of all the 14 sampling sites, 22 species of macroinvertebrates were collected, totally, which included 6 species of aquatic insects, 7 species of Mollusca, 2 species of Crustacean, 7 species of Oligochaeta. The species of macroinverte- brates during May, July and September in Yuqiao reservoir were 11, 8 and 10, respectively. The dominant species were Chironomus sinicus, and Monopylephorus limosus. The average density and biomass of the macrobenthos were 132.43 ind./m2 and 50.09 g/m2. Yuqiao reservoir was mostly at status of premediate polluted, according to the Margalef index, Shannon index and Pielou index. The species of during May, July and September in Beidagang reservoir were 5 5 and 5, respectively. The dominant species were Chironomus sinicus, Penaeus vannamei. The average density and biomass of the macrobenthos were 218 ind./m2 and 2.70 g/m2. Beidagang reservoir was mostly at status of heavy polluted, accord- ing to the Margalef index, Shannon-wiener index, Pielou index. The species of during May, July and September in Erwangzhuang reservoir were 3, 5 and 5, respectively. The dominant species were Monopylephorus limosus, Chi- ronomus sinicus. The average density and biomass of the macrobenthos were 104 ind/m2 and 0.20 g/m2. Erwangzhuang reservoir was mostly at status of intermediate polluted, according to the Margalef index, Shannon index, Pielou index. The density of zoobenthos in Yuqiao Reservoir was positively significantly correlated with TP （P〉 0.05）, negatively correlated with NH4＋-N （P〉0.05）, positively correlated with COD （P〈 0.01）, not significantly correlated with other environment factors （P〉0.05）. There was no significant correlation between biomass of zoobenthos and environment factors. The density of zoobenthos in Beidagang Reservoir with NH4＋-N was positively signif- icantly correlated （P〈0.05）, not significantly correlated with other aquatic environment factors （P〉0.05）. There was no significant correlation between biomass of zoobenthos and environment factors. The density of zoobenthos in Erwangzhuang Reser- voir with NO3-N was positively significantly correlated （P〈0.05）, not significant cor- related with other aquatic environment factors （F〉0.05）. The biomass of zoobenthos in Erwangzhuang Reservoir with NH4＋-N was positively significantly correlated （P〈 0.05）, not significant correlated with other aquatic environment factors （P〉0.05）. [Conclusion] It is indicated that this three reservoirs were all eutrophied and polluted, and the eurephication extent change of water in three reservoirs is as follows： Beidagang reservoir〉Erwangzhuang reservoir〉Yuqiao reservoir.

Dynamic changes in microbial activity and community structure during biodegradation of petroleum compounds:A laboratory experiment

With 110-d incubation experiment in laboratory, the responses of microbial quantity, soil enzymatic activity, and bacterial community structure to different amounts of diesel fuel amendments were studied to reveal whether certain biological and biochemical characteristics could serve as reliable indicators of petroleum hydrocarbon contamination in meadow-brown soil, and use these indicators to evaluate the actual ecological impacts of 50-year petroleum-refining wastewater irrigation on soil function in Shenfu irrigation area. Results showed that amendments of ~ 1000 mg/kg diesel fuel stimulated the growth of aerobic heterotrophic bacteria, and increased the activity of soil dehydrogenase, hydrogenperoxidase, polyphenol oxidase and substrate-induced respiration. Soil bacterial diversity decreased slightly during the first 15 d of incubation and recovered to the control level on day 30. The significant decrease of the colony forming units of soil actinomyces and filamentous fungi can be taken as the sensitive biological indicators of petroleum contamination when soil was amended with 〉15000 mg/kg diesel fuel. The sharp decrease in urease activity was recommended as the most sensitive biochemical indicator of heavy diesel fuel contamination. The shifts in community structure to a community documented by Sphingomonadaceae within a-subgroup of Proteobacteria could be served as a sensitive and precise indicator of diesel fuel contamination. Based on the results described in this paper, the soil function in Shenfu irrigation area was disturbed to some extent.

A comprehensive analysis of the response of the fungal community structure to long-term continuous cropping in three typical upland crops

Certain agricultural management practices are known to affect the soil microbial community structure;however,knowledge of the response of the fungal community structure to the long-term continuous cropping and rotation of soybean,maize and wheat in the same agroecosystem is limited.We assessed the fungal abundance,composition and diversity among soybean rotation,maize rotation and wheat rotation systems and among long-term continuous cropping systems of soybean,maize and wheat as the effect of crop types on fungal community structure.We compared these fungal parameters of same crop between long-term crop rotation and continuous cropping systems as the effect of cropping systems on fungal community structure.The fungal abundance and composition were measured by quantitative real-time PCR and Illumina MiSeq sequencing.The results revealed that long-term continuous soybean cropping increased the soil fungal abundance compared with soybean rotation,and the fungal abundance was decreased in long-term continuous maize cropping compared with maize rotation.The long-term continuous soybean cropping also exhibited increased soil fungal diversity.The variation in the fungal community structure among the three crops was greater than that between long-term continuous cropping and rotation cropping.Mortierella,Guehomyces and Alternaria were the most important contributors to the dissimilarity of the fungal communities between the continuous cropping and rotation cropping of soybean,maize and wheat.There were 11 potential pathogen and 11 potential biocontrol fungi identified,and the relative abundance of most of the potential pathogenic fungi increased during the long-term continuous cropping of all three crops.The relative abundance of most biocontrol fungi increased in long-term continuous soybean cropping but decreased in long-term continuous maize and wheat cropping.Our results indicate that the response of the soil fungal community structure to long-term continuous cropping varies based upon crop types.

Effect of Different Vegetation Types on the Rhizosphere Soil Microbial Community Structure in the Loess Plateau of China

The Loess Plateau in China is one of the most eroded areas in the world. Accordingly, vegetation restoration has been implemented in this area over the past two decades to remedy the soil degradation problem. Understanding the microbial community structure is essential for the sustainability of ecosystems and for the reclamation of degraded arable land. This study aimed to determine the effect of different vegetation types on microbial processes and community structure in rhizosphere soils in the Loess Plateau. The six vegetation types were as follows：two natural grassland （Artemisia capillaries and Heteropappus altaicus）, two artificial grassland （Astragalus adsurgens and Panicum virgatum）, and two artificial shrubland （Caragana korshinskii and Hippophae rhamnoides） species. The microbial community structure and functional diversity were examined by analyzing the phospholipid fatty acids （PLFAs） and community-level physiological profiles. The results showed that rhizosphere soil sampled from the H. altaicus and A. capillaries plots had the highest values of microbial biomass C, average well color development of carbon resources, Gram-negative （G-） bacterial PLFA, bacterial PLFA, total PLFA, Shannon richness, and Shannon evenness, as well as the lowest metabolic quotient. Soil sampled from the H. rhamnoides plots had the highest metabolic quotient and Gram-positive （G＋） bacterial PLFA, and soil sampled from the A. adsurgens and A. capillaries plots had the highest fungal PLFA and fungal：bacterial PLFA ratio. Correlation analysis indicated a signiifcant positive relationship among the microbial biomass C, G- bacterial PLFA, bacterial PLFA, and total PLFA. In conclusion, plant species under arid climatic conditions signiifcantly affected the microbial community structure in rhizosphere soil. Among the studied plants, natural grassland species generated the most favorable microbial conditions.

Upwelling and anthropogenic forcing on phytoplankton productivity and community structure changes in the Zhejiang coastal area over the last 100 years

Phytoplankton productivity and community structure in marginal seas have been altered significantly during the past three decades, but it is still a challenge to distinguish the forcing mechanisms between climate change and anthropogenic activities. High time-resolution biomarker records of two 210Pb-dated sediment cores（#34： 28.5°N, 122.272°E; CJ12-1269： 28.861 9°N, 122.515 3°E） from the Min-Zhe coastal mud area were compared to reveal changes of phytoplankton productivity and community structure over the past 100 years. Phytoplankton productivity started to increase gradually from the 1970 s and increased rapidly after the late 1990 s at Site #34; and it started to increase gradually from the middle 1960 s and increased rapidly after the late 1980 s at Site CJ12-1269. Productivity of Core CJ12-1269 was higher than that of Core #34. Phytoplankton community structure variations displayed opposite patterns in the two cores. The decreasing D/B（dinosterol/brassicasterol） ratio of Core #34 since the 1960 s revealed increased diatom contribution to total productivity. In contrast, the increasing D/B ratio of Core CJ12-1269 since the 1950 s indicated increased dinoflagellate contribution to total productivity. Both the productivity increase and the increased dinoflagellate contribution in Core CJ12-1269 since the 1950–1960s were mainly caused by anthropogenic activities, as the location was closer to the Changjiang River Estuary with higher nutrient concentration and decreasing Si/N ratios. However, increased diatom contribution in Core #34 is proposed to be caused by increased coastal upwelling, with higher nutrient concentration and higher Si/N ratios.

Effects of Soil Texture on the Growth of Young Apple Trees and Soil Microbial Community Structure Under Replanted Conditions

A two-year field experiment was carried out in order to study the occurrence degree and mechanism of apple replant disease(ARD)in the apple orchards with different soil textures.So we can adopt appropriate controlmeasures according to the severity of ARD.Healthy two-year-old seedlings with consistent growth were selected,of which the root stock was T337 and the scion was Yanfu 3.There were significant differences in biomass between methyl bromide fumigation and replanted treatments,and the difference was the largest in clay loam,followed by sandy loam,and loam,which verified ARD in clay loam was most serious,followed by sandy loam and loam.Based on high-throughput sequencing of fungi in soil samples,fungal richness and diversity were the highest in clay loam,followed by sandy loam,and loam.The relative abundance of Fusarium in SX,SL,FX,FL,WX and WL was 7.33%,19.32%,2.70%,4.24%,10.71%and 23.87%,respectively.Based on Real-time quantitative analysis,there were significant differences in the number of Fusarium oxysporum and Fusarium solani between methyl bromide fumigation and replanted treatments,i.e.,clay loam>sandy loam>loam.Fusarium was the main pathogen causing ARD.This shows that ARD is the most serious under replanted clay loam condition.High-throughput sequencing technology was used to prove the difference in Fusarium was one of the important reasons for ARD under different soil textures.This technology provides a new idea for the prevention and control of ARD.

Analysis of effect of nicotine on microbial community structure in sediment using PCR-DGGE fingerprinting

Solid or liquid waste containing a high concentration of nicotine can pollute sediment in rivers and lakes, and may destroy the ecological balance if it is directly discharged into the environment without any treatment. In this study, the polymerase chain reaction （PCR） and denaturing gradient gel electrophoresis （DGGE） method was used to analyze the variation of the microbial community structure in the control and nicotinecontaminated sediment samples with nicotine concentration and time of exposure. The results demonstrated that the growth of some bacterial species in the nicotine-contaminated sediment samples was inhibited during the exposure. Some bacteria decreased in species diversity and in quantity with the increase of nicotine concentration or time of exposure, while other bacteria were enriched under the effect of nicotine, and their DGGE bands changed from undertones to deep colors. The microbial community structure, however, showed a wide variation in the nicotine- contaminated sediment samples, especially in the sediment samples treated with high-concentration nicotine. The Jaccard index was only 35.1% between the initial sediment sample and the sediment sample with a nicotine concentration of 0.030 μg/g after 28 d of exposure. Diversity indices showed that the contaminated groups had a similar trend over time. The diversity indices of contaminated groups all decreased in the first 7 d after exposure, then increased until day 42. It has been found that nicotine decreased the diversity of the microbial community in the sediment.

Wheat, maize and sunflower cropping systems selectively influence bacteria community structure and diversity in their and succeeding crop's rhizosphere

supported by the Special Fund for Agro-scientific Research in the Public Interest in China （201103001）

Bacterial and archaeal community structures in the Arctic deepsea sediment

Microbial community structures in the Arctic deep-sea sedimentary ecosystem are determined by organic matter input, energy availability, and other environmental factors. However, global warming and earlier ice-cover melting are affecting the microbial diversity. To characterize the Arctic deep-sea sediment microbial diversity and its relationship with environmental factors, we applied Roche 454 sequencing of 16 S r DNA amplicons from Arctic deep-sea sediment sample. Both bacterial and archaeal communities＇ richness, compositions and structures as well as taxonomic and phylogenetic affiliations of identified clades were characterized. Phylotypes relating to sulfur reduction and chemoorganotrophic lifestyle are major groups in the bacterial groups; while the archaeal community is dominated by phylotypes most closely related to the ammonia-oxidizing Thaumarchaeota（96.66%） and methanogenic Euryarchaeota（3.21%）. This study describes the microbial diversity in the Arctic deep marine sediment（〉3 500 m） near the North Pole and would lay foundation for future functional analysis on microbial metabolic processes and pathways predictions in similar environments.