Prediction of cell-cell communication patierns of dorsal root ganglion cells:single-cell RNA sequencing data analysis

Dorsal root ganglion neurons transmit peripheral somatic information to the central nervous system,and dorsal root ganglion neuron excitability affects pain perception.Dorsal root ganglion stimulation is a new approach for managing pain sensation.Knowledge of the cell-cell communication among dorsal root ganglion cells may help in the development of new pain and itch management strategies.Here,we used the single-cell RNA-sequencing(scRNA-seq)database to investigate intercellular communication networks among dorsal root ganglion cells.We collected scRNA-seq data from six samples from three studies,yielding data on a total of 17,766 cells.Based on genetic profiles,we identified satellite glial cells,Schwann cells,neurons,vascular endothelial cells,immune cells,fibroblasts,and vascular smooth muscle cells.Further analysis revealed that eight types of dorsal root ganglion neurons mediated proprioceptive,itch,touch,mechanical,heat,and cold sensations.Moreover,we predicted several distinct forms of intercellular communication among dorsal root ganglion cells,including cell-cell contact,secreted signals,extracellular matrix,and neurotransmitter-mediated signals.The data mining predicted that Mrgpra3-positive neurons robustly express the genes encoding the adenosine Adora2b(A2B)receptor and glial cell line-derived neurotrophic factor family receptor alpha 1(GFRα-1).Our immunohistochemistry results confirmed the coexpression of the A2B receptor and GFRα-1.Intrathecal injection of the A2B receptor antagonist PSB-603 effectively prevented histamine-induced scratching behaviour in a dose-dependent manner.Our results demonstrate the involvement of the A2B receptor in the modulation of itch sensation.Furthermore,our findings provide insight into dorsal root ganglion cell-cell communication patterns and mechanisms.Our results should contribute to the development of new strategies for the regulation of dorsal root ganglion excitability.

A novel method for clustering cellular data to improve classification

Many fields,such as neuroscience,are experiencing the vast prolife ration of cellular data,underscoring the need fo r organizing and interpreting large datasets.A popular approach partitions data into manageable subsets via hierarchical clustering,but objective methods to determine the appropriate classification granularity are missing.We recently introduced a technique to systematically identify when to stop subdividing clusters based on the fundamental principle that cells must differ more between than within clusters.Here we present the corresponding protocol to classify cellular datasets by combining datadriven unsupervised hierarchical clustering with statistical testing.These general-purpose functions are applicable to any cellular dataset that can be organized as two-dimensional matrices of numerical values,including molecula r,physiological,and anatomical datasets.We demonstrate the protocol using cellular data from the Janelia MouseLight project to chara cterize morphological aspects of neurons.

A New Encryption Mechanism Supporting the Update of Encrypted Data for Secure and Efficient Collaboration in the Cloud Environment

With the rise of remote collaboration,the demand for advanced storage and collaboration tools has rapidly increased.However,traditional collaboration tools primarily rely on access control,leaving data stored on cloud servers vulnerable due to insufficient encryption.This paper introduces a novel mechanism that encrypts data in‘bundle’units,designed to meet the dual requirements of efficiency and security for frequently updated collaborative data.Each bundle includes updated information,allowing only the updated portions to be reencrypted when changes occur.The encryption method proposed in this paper addresses the inefficiencies of traditional encryption modes,such as Cipher Block Chaining(CBC)and Counter(CTR),which require decrypting and re-encrypting the entire dataset whenever updates occur.The proposed method leverages update-specific information embedded within data bundles and metadata that maps the relationship between these bundles and the plaintext data.By utilizing this information,the method accurately identifies the modified portions and applies algorithms to selectively re-encrypt only those sections.This approach significantly enhances the efficiency of data updates while maintaining high performance,particularly in large-scale data environments.To validate this approach,we conducted experiments measuring execution time as both the size of the modified data and the total dataset size varied.Results show that the proposed method significantly outperforms CBC and CTR modes in execution speed,with greater performance gains as data size increases.Additionally,our security evaluation confirms that this method provides robust protection against both passive and active attacks.

Impact of ocean data assimilation on the seasonal forecast of the 2014/15 marine heatwave in the Northeast Pacific Ocean

A remarkable marine heatwave,known as the“Blob”,occurred in the Northeast Pacific Ocean from late 2013 to early 2016,which displayed strong warm anomalies extending from the surface to a depth of 300 m.This study employed two assimilation schemes based on the global Climate Forecast System of Nanjing University of Information Science(NUIST-CFS 1.0)to investigate the impact of ocean data assimilation on the seasonal prediction of this extreme marine heatwave.The sea surface temperature(SST)nudging scheme assimilates SST only,while the deterministic ensemble Kalman filter(EnKF)scheme assimilates observations from the surface to the deep ocean.The latter notably improves the forecasting skill for subsurface temperature anomalies,especially at the depth of 100-300 m(the lower layer),outperforming the SST nudging scheme.It excels in predicting both horizontal and vertical heat transport in the lower layer,contributing to improved forecasts of the lower-layer warming during the Blob.These improvements stem from the assimilation of subsurface observational data,which are important in predicting the upper-ocean conditions.The results suggest that assimilating ocean data with the EnKF scheme significantly enhances the accuracy in predicting subsurface temperature anomalies during the Blob and offers better understanding of its underlying mechanisms.

Topology Data Analysis-Based Error Detection for Semantic Image Transmission with Incremental Knowledge-Based HARQ

Semantic communication(SemCom)aims to achieve high-fidelity information delivery under low communication consumption by only guaranteeing semantic accuracy.Nevertheless,semantic communication still suffers from unexpected channel volatility and thus developing a re-transmission mechanism(e.g.,hybrid automatic repeat request[HARQ])becomes indispensable.In that regard,instead of discarding previously transmitted information,the incremental knowledge-based HARQ(IK-HARQ)is deemed as a more effective mechanism that could sufficiently utilize the information semantics.However,considering the possible existence of semantic ambiguity in image transmission,a simple bit-level cyclic redundancy check(CRC)might compromise the performance of IK-HARQ.Therefore,there emerges a strong incentive to revolutionize the CRC mechanism,thus more effectively reaping the benefits of both SemCom and HARQ.In this paper,built on top of swin transformer-based joint source-channel coding(JSCC)and IK-HARQ,we propose a semantic image transmission framework SC-TDA-HARQ.In particular,different from the conventional CRC,we introduce a topological data analysis(TDA)-based error detection method,which capably digs out the inner topological and geometric information of images,to capture semantic information and determine the necessity for re-transmission.Extensive numerical results validate the effectiveness and efficiency of the proposed SC-TDA-HARQ framework,especially under the limited bandwidth condition,and manifest the superiority of TDA-based error detection method in image transmission.

Synthetic data as an investigative tool in hypertension and renal diseases research

There is a growing body of clinical research on the utility of synthetic data derivatives,an emerging research tool in medicine.In nephrology,clinicians can use machine learning and artificial intelligence as powerful aids in their clinical decision-making while also preserving patient privacy.This is especially important given the epidemiology of chronic kidney disease,renal oncology,and hypertension worldwide.However,there remains a need to create a framework for guidance regarding how to better utilize synthetic data as a practical application in this research.

Exosomes originating from neural stem cells undergoing necroptosis participate in cellular communication by inducing TSC2 upregulation of recipient cells following spinal cord injury

We previously demonstrated that inhibiting neural stem cells necroptosis enhances functional recovery after spinal cord injury.While exosomes are recognized as playing a pivotal role in neural stem cells exocrine function,their precise function in spinal cord injury remains unclear.To investigate the role of exosomes generated following neural stem cells necroptosis after spinal cord injury,we conducted singlecell RNA sequencing and validated that neural stem cells originate from ependymal cells and undergo necroptosis in response to spinal cord injury.Subsequently,we established an in vitro necroptosis model using neural stem cells isolated from embryonic mice aged 16-17 days and extracted exosomes.The results showed that necroptosis did not significantly impact the fundamental characteristics or number of exosomes.Transcriptome sequencing of exosomes in necroptosis group identified 108 differentially expressed messenger RNAs,104 long non-coding RNAs,720 circular RNAs,and 14 microRNAs compared with the control group.Construction of a competing endogenous RNA network identified the following hub genes:tuberous sclerosis 2(Tsc2),solute carrier family 16 member 3(Slc16a3),and forkhead box protein P1(Foxp1).Notably,a significant elevation in TSC2 expression was observed in spinal cord tissues following spinal cord injury.TSC2-positive cells were localized around SRY-box transcription factor 2-positive cells within the injury zone.Furthermore,in vitro analysis revealed increased TSC2 expression in exosomal receptor cells compared with other cells.Further assessment of cellular communication following spinal cord injury showed that Tsc2 was involved in ependymal cellular communication at 1 and 3 days post-injury through the epidermal growth factor and midkine signaling pathways.In addition,Slc16a3 participated in cellular communication in ependymal cells at 7 days post-injury via the vascular endothelial growth factor and macrophage migration inhibitory factor signaling pathways.Collectively,these findings confirm that exosomes derived from neural stem cells undergoing necroptosis play an important role in cellular communication after spinal cord injury and induce TSC2 upregulation in recipient cells.

Call for Papers——Feature Topic Vol.22,No.3,2025 Special Issue of China Communications:Convergence of 6G empowered Edge Intelligence and Generative AI:Theories,Algorithms,and Applications293

Generative artificial intelligence(AI),as an emerging paradigm in content generation,has demonstrated its great potentials in creating high-fidelity data including images,texts,and videos.Nowadays wireless networks and applications have been rapidly evolving from achieving“connected things”to embracing“connected intelligence”.

Magnetic Induction Communication in Extreme Environments:Principles,Technologies,and Challenges

Wireless communications in extreme environments,such as underwater and underground,is an essential technology for interconnecting various devices and enables data transmission and networking.Existing wireless technologies using electromagnetic(EM)waves face many known problems,such as high path loss,unpredictable multi-path fading,and large antenna size in the lossy medium.In this article,the magnetic induction(MI)based physical layer communication is introduced as a promising solution for wireless transmissions in extreme environments.Specifically,the fundamentals of the MI-based communications are reviewed.Then,with the goal of establishing reliable and low-power links between small-size devices,we review several key physical layer technologies for MI-based communications,including the MIbased signal modulations,magnetic beamforming,and relay transmissions,and summarize their state-of-theart research advances.Finally,the related open issues and challenges in each area are analyzed and presented for future investigations.

Text-and-Timbre-Based Speech Semantic Coding for Ultra-Low-Bitrate Communications

To address the contradiction between the explosive growth of wireless data and the limited spectrum resources,semantic communication has been emerging as a promising communication paradigm.In this paper,we thus design a speech semantic coded communication system,referred to as Deep-STS(i.e.,Deep-learning based Speech To Speech),for the lowbandwidth speech communication.Specifically,we first deeply compress the speech data through extracting the textual information from the speech based on the conformer encoder and connectionist temporal classification decoder at the transmitter side of Deep-STS system.In order to facilitate the final speech timbre recovery,we also extract the short-term timbre feature of speech signals only for the starting 2s duration by the long short-term memory network.Then,the Reed-Solomon coding and hybrid automatic repeat request protocol are applied to improve the reliability of transmitting the extracted text and timbre feature over the wireless channel.Third,we reconstruct the speech signal by the mel spectrogram prediction network and vocoder,when the extracted text is received along with the timbre feature at the receiver of Deep-STS system.Finally,we develop the demo system based on the USRP and GNU radio for the performance evaluation of Deep-STS.Numerical results show that the ac-Received:Jan.17,2024 Revised:Jun.12,2024 Editor:Niu Kai curacy of text extraction approaches 95%,and the mel cepstral distortion between the recovered speech signal and the original one in the spectrum domain is less than 10.Furthermore,the experimental results show that the proposed Deep-STS system can reduce the total delay of speech communication by 85%on average compared to the G.723 coding at the transmission rate of 5.4 kbps.More importantly,the coding rate of the proposed Deep-STS system is extremely low,only 0.2 kbps for continuous speech communication.It is worth noting that the Deep-STS with lower coding rate can support the low-zero-power speech communication,unveiling a new era in ultra-efficient coded communications.

Evaluation of ERA5 reanalysis temperature data over the Qilian Mountains of China

Air temperature is an important indicator to analyze climate change in mountainous areas.ERA5 reanalysis air temperature data are important products that were widely used to analyze temperature change in mountainous areas.However,the reliability of ERA5 reanalysis air temperature over the Qilian Mountains(QLM)is unclear.In this study,we evaluated the reliability of ERA5 monthly averaged reanalysis 2 m air temperature data using the observations at 17 meteorological stations in the QLM from 1979 to 2017.The results showed that:ERA5 reanalysis monthly averaged air temperature data have a good applicability in the QLM in general(R2=0.99).ERA5 reanalysis temperature data overestimated the observed temperature in the QLM in general.Root mean square error(RMSE)increases with the increasing of elevation range,showing that the reliability of ERA5 reanalysis temperature data is worse in higher elevation than that in lower altitude.ERA5 reanalysis temperature can capture observational warming rates well.All the smallest warming rates of observational temperature and ERA5 reanalysis temperature are found in winter,with the warming rates of 0.393°C/10a and 0.360°C/10a,respectively.This study will provide a reference for the application of ERA5 reanalysis monthly averaged air temperature data at different elevation ranges in the Qilian Mountains.

Energy Efficient Dual User Association for Large Scale IRS-Aided mmWave Communication Networks

The deployment of multiple intelligent reflecting surfaces(IRSs)in blockage-prone millimeter wave(mmWave)communication networks have garnered considerable attention lately.Despite the remarkably low circuit power consumption per IRS element,the aggregate energy consumption becomes substantial if all elements of an IRS are turned on given a considerable number of IRSs,resulting in lower overall energy efficiency(EE).To tackle this challenge,we propose a flexible and efficient approach that individually controls the status of each IRS element.Specifically,the network EE is maximized by jointly optimizing the associations of base stations(BSs)and user equipments(UEs),transmit beamforming,phase shifts of IRS elements,and the associations of individual IRS elements and UEs.The problem is efficiently addressed in two phases.First,the Gale-Shapley algorithm is applied for BS-UE association,followed by a block coordinate descent-based algorithm that iteratively solves the subproblems related to active beamforming,phase shifts,and element-UE associations.To reduce the tremendous dimensionality of optimization variables introduced by element-UE associations in large-scale IRS networks,we introduce an efficient algorithm to solve the associations between IRS elements and UEs.Numerical results show that the proposed elementwise control scheme improves EE by 34.24% compared to the network with IRS-all-on scheme.

Integrated Sensing and Communication Enabled Sensing Base Station:System Design,Beamforming,Interference Cancellation and Performance Analysis

This paper studies the sensing base station(SBS)that has great potential to improve the safety of vehicles and pedestrians on roads.SBS can detect the targets on the road with communication signals using the integrated sensing and communication(ISAC)technique.Compared with vehicle-mounted radar,SBS has a better sensing field due to its higher deployment position,which can help solve the problem of sensing blind areas.In this paper,key technologies of SBS are studied,including the beamforming algorithm,beam scanning scheme,and interference cancellation algorithm.To transmit and receive ISAC signals simultaneously,a double-coupling antenna array is applied.The free detection beam and directional communication beam are proposed for joint communication and sensing to meet the requirements of beamwidth and pointing directions.The joint timespace-frequency domain division multiple access algorithm is proposed to cancel the interference of SBS,including multiuser interference and duplex interference between sensing and communication.Finally,the sensing and communication performance of SBS under the industrial scientific medical power limitation is analyzed and simulated.Simulation results show that the communication rate of SBS can reach over 100 Mbps and the range of sensing and communication can reach about 500 m.

Enhanced Multi-Object Dwarf Mongoose Algorithm for Optimization Stochastic Data Fusion Wireless Sensor Network Deployment

Wireless sensor network deployment optimization is a classic NP-hard problem and a popular topic in academic research.However,the current research on wireless sensor network deployment problems uses overly simplistic models,and there is a significant gap between the research results and actual wireless sensor networks.Some scholars have now modeled data fusion networks to make them more suitable for practical applications.This paper will explore the deployment problem of a stochastic data fusion wireless sensor network(SDFWSN),a model that reflects the randomness of environmental monitoring and uses data fusion techniques widely used in actual sensor networks for information collection.The deployment problem of SDFWSN is modeled as a multi-objective optimization problem.The network life cycle,spatiotemporal coverage,detection rate,and false alarm rate of SDFWSN are used as optimization objectives to optimize the deployment of network nodes.This paper proposes an enhanced multi-objective mongoose optimization algorithm(EMODMOA)to solve the deployment problem of SDFWSN.First,to overcome the shortcomings of the DMOA algorithm,such as its low convergence and tendency to get stuck in a local optimum,an encircling and hunting strategy is introduced into the original algorithm to propose the EDMOA algorithm.The EDMOA algorithm is designed as the EMODMOA algorithm by selecting reference points using the K-Nearest Neighbor(KNN)algorithm.To verify the effectiveness of the proposed algorithm,the EMODMOA algorithm was tested at CEC 2020 and achieved good results.In the SDFWSN deployment problem,the algorithm was compared with the Non-dominated Sorting Genetic Algorithm II(NSGAII),Multiple Objective Particle Swarm Optimization(MOPSO),Multi-Objective Evolutionary Algorithm based on Decomposition(MOEA/D),and Multi-Objective Grey Wolf Optimizer(MOGWO).By comparing and analyzing the performance evaluation metrics and optimization results of the objective functions of the multi-objective algorithms,the algorithm outperforms the other algorithms in the SDFWSN deployment results.To better demonstrate the superiority of the algorithm,simulations of diverse test cases were also performed,and good results were obtained.

Data driven prediction of fragment velocity distribution under explosive loading conditions

This study presents a machine learning-based method for predicting fragment velocity distribution in warhead fragmentation under explosive loading condition.The fragment resultant velocities are correlated with key design parameters including casing dimensions and detonation positions.The paper details the finite element analysis for fragmentation,the characterizations of the dynamic hardening and fracture models,the generation of comprehensive datasets,and the training of the ANN model.The results show the influence of casing dimensions on fragment velocity distributions,with the tendencies indicating increased resultant velocity with reduced thickness,increased length and diameter.The model's predictive capability is demonstrated through the accurate predictions for both training and testing datasets,showing its potential for the real-time prediction of fragmentation performance.

Experiments on image data augmentation techniques for geological rock type classification with convolutional neural networks

The integration of image analysis through deep learning(DL)into rock classification represents a significant leap forward in geological research.While traditional methods remain invaluable for their expertise and historical context,DL offers a powerful complement by enhancing the speed,objectivity,and precision of the classification process.This research explores the significance of image data augmentation techniques in optimizing the performance of convolutional neural networks(CNNs)for geological image analysis,particularly in the classification of igneous,metamorphic,and sedimentary rock types from rock thin section(RTS)images.This study primarily focuses on classic image augmentation techniques and evaluates their impact on model accuracy and precision.Results demonstrate that augmentation techniques like Equalize significantly enhance the model's classification capabilities,achieving an F1-Score of 0.9869 for igneous rocks,0.9884 for metamorphic rocks,and 0.9929 for sedimentary rocks,representing improvements compared to the baseline original results.Moreover,the weighted average F1-Score across all classes and techniques is 0.9886,indicating an enhancement.Conversely,methods like Distort lead to decreased accuracy and F1-Score,with an F1-Score of 0.949 for igneous rocks,0.954 for metamorphic rocks,and 0.9416 for sedimentary rocks,exacerbating the performance compared to the baseline.The study underscores the practicality of image data augmentation in geological image classification and advocates for the adoption of DL methods in this domain for automation and improved results.The findings of this study can benefit various fields,including remote sensing,mineral exploration,and environmental monitoring,by enhancing the accuracy of geological image analysis both for scientific research and industrial applications.

Create Your Own Data and Energy Integrated Communication Network:A Brief Tutorial and a Prototype System

In order to satisfy the ever-increasing energy appetite of the massive battery-powered and batteryless communication devices,radio frequency(RF)signals have been relied upon for transferring wireless power to them.The joint coordination of wireless power transfer(WPT)and wireless information transfer(WIT)yields simultaneous wireless information and power transfer(SWIPT)as well as data and energy integrated communication network(DEIN).However,as a promising technique,few efforts are invested in the hardware implementation of DEIN.In order to make DEIN a reality,this paper focuses on hardware implementation of a DEIN.It firstly provides a brief tutorial on SWIPT,while summarising the latest hardware design of WPT transceiver and the existing commercial solutions.Then,a prototype design in DEIN with full protocol stack is elaborated,followed by its performance evaluation.

Reliable transmission of consultative committee for space data systems file delivery protocol in deep space communication

In consultative committee for space data systems（CCSDS） file delivery protocol（CFDP） recommendation of reliable transmission,there are no detail transmission procedure and delay calculation of prompted negative acknowledge and asynchronous negative acknowledge models.CFDP is designed to provide data and storage management,story and forward,custody transfer and reliable end-to-end delivery over deep space characterized by huge latency,intermittent link,asymmetric bandwidth and big bit error rate（BER）.Four reliable transmission models are analyzed and an expected file-delivery time is calculated with different trans-mission rates,numbers and sizes of packet data units,BERs and frequencies of external events,etc.By comparison of four CFDP models,the requirement of BER for typical missions in deep space is obtained and rules of choosing CFDP models under different uplink state informations are given,which provides references for protocol models selection,utilization and modification.

DCGAN Based Spectrum Sensing Data Enhancement for Behavior Recognition in Self-Organized Communication Network

Communication behavior recognition is an issue with increasingly importance in the antiterrorism and national defense area.However,the sensing data obtained in actual environment is often not sufficient to accurately analyze the communication behavior.Traditional means can hardly utilize the scarce and crude spectrum sensing data captured in a real scene.Thus,communication behavior recognition using raw sensing data under smallsample condition has become a new challenge.In this paper,a data enhanced communication behavior recognition(DECBR)scheme is proposed to meet this challenge.Firstly,a preprocessing method is designed to make the raw spectrum data suitable for the proposed scheme.Then,an adaptive convolutional neural network structure is exploited to carry out communication behavior recognition.Moreover,DCGAN is applied to support data enhancement,which realize communication behavior recognition under small-sample condition.Finally,the scheme is verified by experiments under different data size.The results show that the DECBR scheme can greatly improve the accuracy and efficiency of behavior recognition under smallsample condition.

Coping with the Big Data:Convergence of Communications,Computing and Storage

To cope with the impact of big data,it is proposed to integrate the traditionally individual computing,communications and storage systems,which are getting inevitably converged.An effective information system capacity is introduced and discussed,aimed at excavating potentials of information system under a new paradigm with more degrees of freedom.