Better understanding of genotype-by-environment interaction （GEI） is expected to provide a solid foundation for genetic improvement of crop productivity especially under drought-prone environments. To elucidate the ...Better understanding of genotype-by-environment interaction （GEI） is expected to provide a solid foundation for genetic improvement of crop productivity especially under drought-prone environments. To elucidate the genetic basis of the plant and ear height, 2 F2：3 populations were derived from the crosses of Qi 319 × Huangzaosi （Q/H） and Ye 478 × Huangzaosi （Y/H） with 230 and 235 families, respectively, and their parents were evaluated under 3 diverse environments in Henan, Beijing, and Xinjiang, China during the year of 2007 and 2008, and all the lines were also evaluated under water stress environment. The mapping results showed that a total of 21 and 12 QTLs were identified for plant height in the Q/H and Y/H population, respectively, and 24 and 13 QTLs for ear height, respectively. About 56 and 73% of the QTLs for 2 traits did not present significant QTL-by-environment interaction （QE1） in the normal joint analyses for Q/H and Y/H population, respectively, and about 73% of the QTLs detected did not show significant QEI according to joint analyses for stress condition in Q/H. Most of the detected major QTLs exhibited high stability across different environments. Besides, several major QTLs were detected with large and consistent effect under normal condition （Chr. 6 and 7 in Q/H; Chr. 1, 3 and 9 in Y/H）, or across 2 water regimes （Chr. 1, 8 and 10 for in Q/H）. There were several constitutive QTLs （3 for Q/H and 1 for Y/H） with no or minor QTL-by-environment for the 2 populations. Finally, we found several genomic regions （Chr. 1, 10, etc.） to be co-located across the populations, which could provide useful reference for genetic improvement of these traits in maize breeding programs. Comparative genomic analysis revealed that 3 genes/genetic segments associated with plant height in rice were orthologous to these 3 identified genomic regions carrying the major QTLs for plant and ear height on Chr. 1, 6, and 8, respectively.展开更多
Heterosis is an important biological phenomenon, and it has been used to increase grain yield, quality and resistance to abiotic and biotic stresses in many crops. However, the genetic mechanism of heterosis remains u...Heterosis is an important biological phenomenon, and it has been used to increase grain yield, quality and resistance to abiotic and biotic stresses in many crops. However, the genetic mechanism of heterosis remains unclear up to now. In this study, a set of 184 chromosome segment substitution lines （CSSLs） population, which derived from two inbred lines Ix9801 （the recurrent parent） and Chang 72 （the donor parent）, were used as basal material to construct two test populations with the inbred lines Zheng 58 and Xun 9058. The two test populations were evaluated in two locations over two years, and the heterotic loci for plant height and ear height were identified by comparing the performance of each test hybrid with the corresponding CK at P〈0.05 significant level using one-way ANOVA analysis and Duncan＇s multiple comparisons. There were 24 and 29 different heterotic loci （HL） identified for plant height and ear height in the two populations at two locations over two years. Three HL （hlPH4a, hlPH7c, hlPHlb） for plant height and three （hlEHld, hlEH6b, hlEHlb） for ear height were identified in the CSSLs×Zheng 58 and CSSLs×Xun 9058 populations as contributing highly to heterosis performance of plant height and ear height across four environments. Among the 29 HL identified for ear height, 12 HL （41.4%） shared the same chromosomal region associated with the HL （50.0%） identified for plant height in the same test population and environment.展开更多
Nitrogen concentration in the ear leaf is a good indicator of corn (Zea mays L.) N nutrition status during late growing season. This study was done to examine the relationship of late-season ear leaf N concentration w...Nitrogen concentration in the ear leaf is a good indicator of corn (Zea mays L.) N nutrition status during late growing season. This study was done to examine the relationship of late-season ear leaf N concentration with early- to mid- season plant height of corn at Milan, TN from 2008 to 2010 using linear, quadratic, square root, logarithmic, and exponential models. Six N rate treatments (0, 62, 123, 185, 247, and 308 kg·N·ha-1) repeated four times were implemented each year in a randomized complete block design under four major cropping systems: corn after corn, corn after soybean [Glycine max (L.) Merr.], corn after cotton [Gossypium hirsutum (L.)], and irrigated corn after soybean. The relationship of ear leaf N concentration determined at the blister growth stage (R2) with plant height measured at the 6-leaf (V6), 10-leaf (V10), and 12-leaf (V12) growth stages was statistically significant and positive in non-irrigated corn under normal weather conditions. However, the strength of this relationship was weak to moderate with the determination coefficient (R2) values ranging from 0.21 to 0.51. This relationship was generally improved as the growing season progressed from V6 to V12. Irrigation and abnormal weather seemed to have adverse effects on this relationship. The five regression models performed similarly in the evaluation of this relationship regardless of growth stage, year, and cropping system. Our results suggest that unlike the relationship of corn yield at harvest with plant height measured during early- to mid-season or the relationship of leaf N concentration with plant height when both are measured simultaneously during early- to mid-season, the relationship of late-season ear leaf N concentration with early- to mid-season plant height may not be strong enough to be used to develop algorithms for variable-rate N applications on corn within a field no matter which regression model is used to describe this relationship.展开更多
适宜的株高和穗位高可提高植株的养分利用效率及抗倒伏性,对玉米增产和稳产具有重要意义。为揭示玉米株高和穗位高遗传机制,本研究以854份玉米自交系为关联群体,利用均匀分布于玉米10条染色体的2795个SNP标记对4个环境下玉米株高、穗位...适宜的株高和穗位高可提高植株的养分利用效率及抗倒伏性,对玉米增产和稳产具有重要意义。为揭示玉米株高和穗位高遗传机制,本研究以854份玉米自交系为关联群体,利用均匀分布于玉米10条染色体的2795个SNP标记对4个环境下玉米株高、穗位高以及穗位系数进行全基因组关联分析(genome-wide association study,GWAS)。共定位到81个显著关联SNP位点(P<0.0001),其中与株高显著关联的SNP为35个,单个位点表型解释率为0.02%~6.23%;与穗位高显著关联SNP为31个,单个位点表型变异解释率为0.03%~3.06%;与穗位系数显著关联的SNP位点为24个,单个位点表型变异解释率为0.03%~6.64%。进一步鉴定出15个可在2个及以上环境共定位的稳定SNP,其中6个为本研究首次发现,9个位于前人定位QTL区间或/和关联SNP位点2 Mb范围内。在15个稳定SNP位点上下游各200kb的置信区间共发现83个功能注释基因,结合文献分析筛选出了每个位点最有可能的候选基因,这些候选基因主要参与激素合成与信号转导、糖类代谢、细胞分裂调控等途径。鉴定出6个主效SNP位点,并发现1个可同时调控株高、穗位高和穗位系数的一因多效位点。本研究可为分子标记辅助选择育种提供有效遗传位点,为精细定位和克隆株高与穗位高相关性状基因提供参考。展开更多
Maize is widely cultivated in Papua New Guinea (PNG) and provides farmers with nutrition and income. However, the fall armyworm (FAW) (Spodoptera frugiperda) (J.E. Smith) (Lepidoptera: Noctuidae) invasion is a threat ...Maize is widely cultivated in Papua New Guinea (PNG) and provides farmers with nutrition and income. However, the fall armyworm (FAW) (Spodoptera frugiperda) (J.E. Smith) (Lepidoptera: Noctuidae) invasion is a threat to its production and supply. Hence, this field experiment was conducted to assess the bio-efficacy of plant-derived pesticides (PDPs) against FAW and their interactive effects on maize agronomic performance under field conditions. The treatments studied were turmeric rhizome extract (TRE), neem leaf ash solution (NLAS), neem bark extract (NBE), and untreated plots (control) and were replicated 5 times using the randomized complete block design. The data were subjected to analysis of variance and means were separated by Fisher’s protected least significant difference test. The result showed that the application of PDPs significantly reduced FAW infestation during the period of peak infestation. At 33 DAS, NBE significantly had the lowest number of FAW larvae (0.6) [F (4, 15) = 5.11, p = 0.02] and FAW attack intensity (29.8%) [F (4, 15) = 8.69, p F (4, 15) = 3.58, p = 0.04] and had the highest number of harvested ears (5.0) [F (4, 15) = 3.72, p = 0.04] and fresh ear weights (447 g) [F (4, 15) = 4.65, p = 0.02] compared to NLAS. The TRE and NLAS had performed poorly relative to the control. Hence, NBE can be used to control FAW infestation at a period of high attack intensity (33 DAS). Moreover, this study will provide basic information for future studies on biopesticidal plant extracts as a control of FAW infestation under field conditions in PNG.展开更多
基金supported by grants provided by the Ministry of Science and Technology of China(2006CB101700,2009CB118401,2006BAD13B03)National Natural Science Foundation of China(30730063)
文摘Better understanding of genotype-by-environment interaction （GEI） is expected to provide a solid foundation for genetic improvement of crop productivity especially under drought-prone environments. To elucidate the genetic basis of the plant and ear height, 2 F2：3 populations were derived from the crosses of Qi 319 × Huangzaosi （Q/H） and Ye 478 × Huangzaosi （Y/H） with 230 and 235 families, respectively, and their parents were evaluated under 3 diverse environments in Henan, Beijing, and Xinjiang, China during the year of 2007 and 2008, and all the lines were also evaluated under water stress environment. The mapping results showed that a total of 21 and 12 QTLs were identified for plant height in the Q/H and Y/H population, respectively, and 24 and 13 QTLs for ear height, respectively. About 56 and 73% of the QTLs for 2 traits did not present significant QTL-by-environment interaction （QE1） in the normal joint analyses for Q/H and Y/H population, respectively, and about 73% of the QTLs detected did not show significant QEI according to joint analyses for stress condition in Q/H. Most of the detected major QTLs exhibited high stability across different environments. Besides, several major QTLs were detected with large and consistent effect under normal condition （Chr. 6 and 7 in Q/H; Chr. 1, 3 and 9 in Y/H）, or across 2 water regimes （Chr. 1, 8 and 10 for in Q/H）. There were several constitutive QTLs （3 for Q/H and 1 for Y/H） with no or minor QTL-by-environment for the 2 populations. Finally, we found several genomic regions （Chr. 1, 10, etc.） to be co-located across the populations, which could provide useful reference for genetic improvement of these traits in maize breeding programs. Comparative genomic analysis revealed that 3 genes/genetic segments associated with plant height in rice were orthologous to these 3 identified genomic regions carrying the major QTLs for plant and ear height on Chr. 1, 6, and 8, respectively.
基金supported by the National Basic Research Program of China (2014CB138203)the National Natural Science Foundation of China (31271732)
文摘Heterosis is an important biological phenomenon, and it has been used to increase grain yield, quality and resistance to abiotic and biotic stresses in many crops. However, the genetic mechanism of heterosis remains unclear up to now. In this study, a set of 184 chromosome segment substitution lines （CSSLs） population, which derived from two inbred lines Ix9801 （the recurrent parent） and Chang 72 （the donor parent）, were used as basal material to construct two test populations with the inbred lines Zheng 58 and Xun 9058. The two test populations were evaluated in two locations over two years, and the heterotic loci for plant height and ear height were identified by comparing the performance of each test hybrid with the corresponding CK at P〈0.05 significant level using one-way ANOVA analysis and Duncan＇s multiple comparisons. There were 24 and 29 different heterotic loci （HL） identified for plant height and ear height in the two populations at two locations over two years. Three HL （hlPH4a, hlPH7c, hlPHlb） for plant height and three （hlEHld, hlEH6b, hlEHlb） for ear height were identified in the CSSLs×Zheng 58 and CSSLs×Xun 9058 populations as contributing highly to heterosis performance of plant height and ear height across four environments. Among the 29 HL identified for ear height, 12 HL （41.4%） shared the same chromosomal region associated with the HL （50.0%） identified for plant height in the same test population and environment.
文摘Nitrogen concentration in the ear leaf is a good indicator of corn (Zea mays L.) N nutrition status during late growing season. This study was done to examine the relationship of late-season ear leaf N concentration with early- to mid- season plant height of corn at Milan, TN from 2008 to 2010 using linear, quadratic, square root, logarithmic, and exponential models. Six N rate treatments (0, 62, 123, 185, 247, and 308 kg·N·ha-1) repeated four times were implemented each year in a randomized complete block design under four major cropping systems: corn after corn, corn after soybean [Glycine max (L.) Merr.], corn after cotton [Gossypium hirsutum (L.)], and irrigated corn after soybean. The relationship of ear leaf N concentration determined at the blister growth stage (R2) with plant height measured at the 6-leaf (V6), 10-leaf (V10), and 12-leaf (V12) growth stages was statistically significant and positive in non-irrigated corn under normal weather conditions. However, the strength of this relationship was weak to moderate with the determination coefficient (R2) values ranging from 0.21 to 0.51. This relationship was generally improved as the growing season progressed from V6 to V12. Irrigation and abnormal weather seemed to have adverse effects on this relationship. The five regression models performed similarly in the evaluation of this relationship regardless of growth stage, year, and cropping system. Our results suggest that unlike the relationship of corn yield at harvest with plant height measured during early- to mid-season or the relationship of leaf N concentration with plant height when both are measured simultaneously during early- to mid-season, the relationship of late-season ear leaf N concentration with early- to mid-season plant height may not be strong enough to be used to develop algorithms for variable-rate N applications on corn within a field no matter which regression model is used to describe this relationship.
文摘适宜的株高和穗位高可提高植株的养分利用效率及抗倒伏性,对玉米增产和稳产具有重要意义。为揭示玉米株高和穗位高遗传机制,本研究以854份玉米自交系为关联群体,利用均匀分布于玉米10条染色体的2795个SNP标记对4个环境下玉米株高、穗位高以及穗位系数进行全基因组关联分析(genome-wide association study,GWAS)。共定位到81个显著关联SNP位点(P<0.0001),其中与株高显著关联的SNP为35个,单个位点表型解释率为0.02%~6.23%;与穗位高显著关联SNP为31个,单个位点表型变异解释率为0.03%~3.06%;与穗位系数显著关联的SNP位点为24个,单个位点表型变异解释率为0.03%~6.64%。进一步鉴定出15个可在2个及以上环境共定位的稳定SNP,其中6个为本研究首次发现,9个位于前人定位QTL区间或/和关联SNP位点2 Mb范围内。在15个稳定SNP位点上下游各200kb的置信区间共发现83个功能注释基因,结合文献分析筛选出了每个位点最有可能的候选基因,这些候选基因主要参与激素合成与信号转导、糖类代谢、细胞分裂调控等途径。鉴定出6个主效SNP位点,并发现1个可同时调控株高、穗位高和穗位系数的一因多效位点。本研究可为分子标记辅助选择育种提供有效遗传位点,为精细定位和克隆株高与穗位高相关性状基因提供参考。
文摘Maize is widely cultivated in Papua New Guinea (PNG) and provides farmers with nutrition and income. However, the fall armyworm (FAW) (Spodoptera frugiperda) (J.E. Smith) (Lepidoptera: Noctuidae) invasion is a threat to its production and supply. Hence, this field experiment was conducted to assess the bio-efficacy of plant-derived pesticides (PDPs) against FAW and their interactive effects on maize agronomic performance under field conditions. The treatments studied were turmeric rhizome extract (TRE), neem leaf ash solution (NLAS), neem bark extract (NBE), and untreated plots (control) and were replicated 5 times using the randomized complete block design. The data were subjected to analysis of variance and means were separated by Fisher’s protected least significant difference test. The result showed that the application of PDPs significantly reduced FAW infestation during the period of peak infestation. At 33 DAS, NBE significantly had the lowest number of FAW larvae (0.6) [F (4, 15) = 5.11, p = 0.02] and FAW attack intensity (29.8%) [F (4, 15) = 8.69, p F (4, 15) = 3.58, p = 0.04] and had the highest number of harvested ears (5.0) [F (4, 15) = 3.72, p = 0.04] and fresh ear weights (447 g) [F (4, 15) = 4.65, p = 0.02] compared to NLAS. The TRE and NLAS had performed poorly relative to the control. Hence, NBE can be used to control FAW infestation at a period of high attack intensity (33 DAS). Moreover, this study will provide basic information for future studies on biopesticidal plant extracts as a control of FAW infestation under field conditions in PNG.
