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A review of the literature on the use of CRISPR/Cas9 gene therapy to treat hepatocellular carcinoma 被引量:1
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作者 ELHAM AMJAD RAFAELE PEZZANI BABAK SOKOUTI 《Oncology Research》 SCIE 2024年第3期439-461,共23页
Noncoding RNAs instruct the Cas9 nuclease to site speifillyl cleave DNA in the CRISPR/Cas9 system.Despite the high incidence of hepatocellular carcinoma(HCC),the patient's outcome is poor.As a result of the emerge... Noncoding RNAs instruct the Cas9 nuclease to site speifillyl cleave DNA in the CRISPR/Cas9 system.Despite the high incidence of hepatocellular carcinoma(HCC),the patient's outcome is poor.As a result of the emergence of therapeutic resistance in HCC patients,dlinicians have faced difficulties in treating such tumor.In addition,CRISPR/Cas9 screens were used to identify genes that improve the dlinical response of HCC patients.It is the objective of this article to summarize the current understanding of the use of the CRISPR/Cas9 system for the treatment of cancer,with a particular emphasis on HCC as part of the current state of knowledge.Thus,in order to locate recent developments in oncology research,we examined both the Scopus database and the PubMed database.The ability to selectively interfere with gene expression in combinatorial CRISPR/Cas9 screening can lead to the discovery of new effective HCC treatment regimens by combining clinically approved drugs.Drug resistance can be overcome with the help of the CRISPR/Cas9 system.HCC signature genes and resistance to treatment have been uncovered by genome-scale CRISPR activation screening although this method is not without limitations.It has been extensively examined whether CRISPR can be used as a tool for disease research and gene therapy.CRISPR and its applications to tumor research,particularly in HCC,are examined in this study through a review of the literature. 展开更多
关键词 CRISPR/Cas9 system gene therapy TUMOR Hepatocellular carcinoma Liver cancer gene editing
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Understanding the role of transmembrane 9 superfamily member 1 in bladder cancer pathogenesis
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作者 Venkata Krishna Vamsi Gade Budhi Singh Yadav 《World Journal of Clinical Oncology》 2024年第4期468-471,共4页
In this editorial we comment on the article by Wei et al,published in the recent issue of the World Journal of Clinical Oncology.The authors investigated the role of Transmembrane 9 superfamily member 1(TM9SF1)protein... In this editorial we comment on the article by Wei et al,published in the recent issue of the World Journal of Clinical Oncology.The authors investigated the role of Transmembrane 9 superfamily member 1(TM9SF1)protein in bladder cancer(BC)carcinogenesis.Lentiviral vectors were used to achieve silencing or overexpression of TM9SF1 gene in three BC cell lines.These cell lines were then subject to cell counting kit 8,wound-healing assay,transwell assay,and flow cytometry.Proliferation,migration,and invasion of BC cells were increased in cell lines subjected to TM9SF1 overexpression.TM9SF1 silencing inhibited proliferation,migration and invasion of BC cells.The authors conclude that TM9SF1 may be an oncogene in bladder cancer pathogenesis. 展开更多
关键词 Urinary bladder cancer Transmembrane 9 superfamily member 1 gene cell line Lentiviral vectors Wound healing assay ONCOgene Proliferation Migration
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SCN9A基因突变引起原发性红斑肢痛症1例及文献复习
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作者 孙翠翠 杨赛 +3 位作者 郑航 梁云生 林志淼 陈永锋 《皮肤性病诊疗学杂志》 2024年第1期15-21,共7页
目的 报告1例以双小腿、双足灼痛伴潮红、皮温升高为主要临床特征的原发性红斑肢痛症(PEM),并寻找其致病基因和突变位点,探索有效治疗方法。方法 收集患者临床资料,采集患者及亲属外周血,提取基因组DNA,进行遗传皮肤病基因二代测序,并用... 目的 报告1例以双小腿、双足灼痛伴潮红、皮温升高为主要临床特征的原发性红斑肢痛症(PEM),并寻找其致病基因和突变位点,探索有效治疗方法。方法 收集患者临床资料,采集患者及亲属外周血,提取基因组DNA,进行遗传皮肤病基因二代测序,并用Sanger测序验证可疑致病基因突变。对该患者予以阿司匹林抗炎,苯甲酸利扎曲普坦片、盐酸美西律片、卡马西平片、局部注射肉毒毒素镇痛,外用复方多粘菌素B软膏等以及冷却疗法进行综合治疗。结果 在患者外周血基因组DNA中检测到SCN9A:NM_002977.3:c.688+142G>A或SCN9A:ENST00000375387.4:c.626G>A(p.Gly209Asp)杂合变异,其姐姐、叔叔2、堂兄检测出相同突变。结合致病基因及临床表现,患者被诊断为PEM。治疗后,患者疼痛明显缓解。结论 SCN9A基因的NM_002977.3:c.688+142G>A内含子突变或c.626G>A(p.Gly209Asp)错义突变是本例PEM的致病原因。阿司匹林、苯甲酸利扎曲普坦片、盐酸美西律片、卡马西平片及局部治疗的联合应用可有效控制PEM症状,减少急性发作频率,改善预后。 展开更多
关键词 原发性红斑肢痛症 scn9a基因 Nav1.7通道
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Facing ethical concerns in the age of precise gene therapy:Outlook on inherited arrhythmias
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作者 Federico Carbone Fabrizio Montecucco 《World Journal of Cardiology》 2024年第2期64-66,共3页
This editorial,comments on the article by Spartalis et al published in the recent issue of the World Journal of Cardiology.We here provide an outlook on potential ethical concerns related to the future application of ... This editorial,comments on the article by Spartalis et al published in the recent issue of the World Journal of Cardiology.We here provide an outlook on potential ethical concerns related to the future application of gene therapy in the field of inherited arrhythmias.As monogenic diseases with no or few therapeutic options available through standard care,inherited arrhythmias are ideal candidates to gene therapy in their treatment.Patients with inherited arrhythmias typically have a poor quality of life,especially young people engaged in agonistic sports.While genome editing for treatment of inherited arrhythmias still has theoretical application,advances in CRISPR/Cas9 technology now allows the generation of knock-in animal models of the disease.However,clinical translation is somehow expected soon and this make consistent discussing about ethical concerns related to gene editing in inherited arrhythmias.Genomic off-target activity is a known technical issue,but its relationship with ethnical and individual genetical diversity raises concerns about an equitable accessibility.Meanwhile,the costeffectiveness may further limit an equal distribution of gene therapies.The economic burden of gene therapies on healthcare systems is is increasingly recognized as a pressing concern.A growing body of studies are reporting uncertainty in payback periods with intuitive short-term effects for insurance-based healthcare systems,but potential concerns for universal healthcare systems in the long term as well.Altogether,those aspects strongly indicate a need of regulatory entities to manage those issues. 展开更多
关键词 ETHICS Inherited arrhythmias CRISPR/Cas9 gene therapy Equitable accessibility
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Studies on the temporal,structural,and interacting features of the clubroot resistance gene Rcr1 using CRISPR/Cas9-based systems
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作者 Hao Hu Fengqun Yu 《Horticultural Plant Journal》 SCIE CAS CSCD 2024年第4期1035-1048,共14页
Clubroot disease is a severe threat to Brassica crops globally,particularly in western Canada.Genetic resistance,achieved through pyramiding clubroot resistance(CR)genes with different modes of action,is the most impo... Clubroot disease is a severe threat to Brassica crops globally,particularly in western Canada.Genetic resistance,achieved through pyramiding clubroot resistance(CR)genes with different modes of action,is the most important strategy for managing the disease.However,studies on the CR gene functions are quite limited.In this study,we have conducted investigations into the temporal,structural,and interacting features of a newly cloned CR gene,Rcr1,using CRISPR/Cas9 technology.For temporal functionality,we developed a novel CRISPR/Cas9-based binary vector,pHHIGR-Hsp18.2,to deliver Rcr1 into a susceptible canola line(DH12075)and observed that early expression of Rcr1 is critical for conferring resistance.For structural functionality,several independent mutations in specific domains of Rcr1 resulted in loss-offunction,highlighting their importance for CR phenotype.In the study of the interacting features of Rcr1,a cysteine protease gene and its homologous allele in canola were successfully disrupted via CRISPR/Cas9 as an interacting component with Rcr1 protein,resulting in the conversion from clubroot resistant to susceptible in plants carrying intact Rcr1.These results indicated an indispensable role of these two cysteine proteases in Rcr1-mediated resistance response.This study,the first of its kind,provides valuable insights into the functionality of Rcr1.Further,the new vector p HHIGR-Hsp18.2 demonstrated an inducible feature on the removal of add-on traits,which should be useful for functional genomics and other similar research in brassica crops. 展开更多
关键词 Clubroot resistance Brassica crops CANOLA Rcr1 CRISPR/Cas9 system gene knock-out Timing control Non-synonymous mutation Protein-protein interaction
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CRISPR-based genetic control strategies for insect pests
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作者 Ying YAN Roswitha A.AUMANN +1 位作者 Irina HÄCKER Marc F.SCHETELIG 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2023年第3期651-668,共18页
Genetic control strategies such as the sterile insect technique have successfully fought insect pests worldwide. The CRISPR(clustered regularly interspaced short palindromic repeats) technology, together with high-qua... Genetic control strategies such as the sterile insect technique have successfully fought insect pests worldwide. The CRISPR(clustered regularly interspaced short palindromic repeats) technology, together with high-quality genomic resources obtained in more and more species, greatly facilitates the development of novel genetic control insect strains that can be used in area-wide and species-specific pest control programs. Here, we review the research progress towards state-of-art CRISPR-based genetic control strategies, including gene drive, sex ratio distortion, CRISPRengineered genetic sexing strains, and precision-guided sterile insect technique. These strategies’ working mechanisms,potential resistance development mechanisms, and regulations are illustrated and discussed. In addition, recent developments such as stacked and conditional systems are introduced. We envision that the advances in genetic technology will continue to be one of the driving forces for developing the next generation of pest control strategies. 展开更多
关键词 insect pest genetic control sterile insect technique gene drive genetic sexing strains CRISPR-Cas9
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A cluster of mutagenesis revealed an osmotic regulatory role of the OsPIP1 genes in enhancing rice salt tolerance 被引量:1
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作者 Leyuan Tao Bing Wang +6 位作者 Shichao Xin Wei Li Shengcai Huang Laihua Liu Jing Cui Qianru Zhang Xianguo Cheng 《The Crop Journal》 SCIE CSCD 2023年第4期1204-1217,共14页
Aquaporins play important regulatory roles in improving plant abiotic stress tolerance.To better understand whether the Os PIP1 genes collectively dominate the osmotic regulation in rice under salt stress,a cluster ed... Aquaporins play important regulatory roles in improving plant abiotic stress tolerance.To better understand whether the Os PIP1 genes collectively dominate the osmotic regulation in rice under salt stress,a cluster editing of the Os PIP1;1,Os PIP1;2 and Os PIP1;3 genes in rice was performed by CRISPR/Cas9 system.Sequencing showed that two mutants with Cas9-free,line 14 and line 18 were successfully edited.Briefly,line 14 deleted a single C base in both the Os PIP1;1 and Os PIP1;3 genes,and inserted a single T base in the Os PIP1;2 gene,respectively.While line 18 demonstrated an insertion of a single A base in the Os PIP1;1gene and a single T base in both the Os PIP1;2 and Os PIP1;3 genes,respectively.Multiplex editing of the Os PIP1 genes significantly inhibited photosynthetic rate and accumulation of compatible metabolites,but increased MDA contents and osmotic potentials in the mutants,thus delaying rice growth under salt stress.Functional loss of the Os PIP1 genes obviously suppressed the expressions of the Os PIP1,Os SOS1,Os CIPK24 and Os CBL4 genes,and increased the influxes of Na+and effluxes of K^(+)/H^(+)in the roots,thus accumulating more Na+in rice mutants under salt stress.This study suggests that the Os PIP1 genes are essential modulators collectively contributing to the enhancement of rice salt stress tolerance,and multiplex editing of the Os PIP1 genes provides insight into the osmotic regulation of the PIP genes. 展开更多
关键词 AQUAPORIN Multiplex gene editing CRISPR/Cas9 OsPIP1 genes Rice(Oryza sativa L.) Salt tolerance
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Genome-wide analysis of nuclear factor Y genes and functional investigation of watermelon ClNF-YB9 during seed development
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作者 Qin Feng Ling Xiao +8 位作者 Jiafa Wang Jie Wang Chenyang Chen Jianyang Sun Xixi Wu Man Liu Xian Zhang Shujuan Tian Li Yuan 《The Crop Journal》 SCIE CSCD 2023年第5期1469-1479,共11页
The nuclear factor Y(NF-Y) gene family is a class of transcription factors that are widely distributed in eukaryotes and are involved in various biological processes. However, the NF-Y gene family members in watermelo... The nuclear factor Y(NF-Y) gene family is a class of transcription factors that are widely distributed in eukaryotes and are involved in various biological processes. However, the NF-Y gene family members in watermelon, a valued and nutritious fruit, remain largely unknown and their functions have not been characterized. In the present study, 22 ClNF-Y genes in watermelon, 29 CsNF-Y genes in cucumber, and 24CmNF-Y genes in melon were identified based on the whole-genome investigation and their protein properties, gene location, gene structure, motif composition, conserved domain, and evolutionary relationship were investigated. ClNF-YB9 from watermelon and its homologs in cucumber and melon were expressed specifically in seeds. Its expression remained low in the early stages of watermelon seed development,increased at 20 days after pollination(DAP), and peaked at 45–50 DAP. Moreover, the knockout mutant Clnf-yb9 exhibited abnormal leafy cotyledon phenotype, implying its critical role during seed formation.Finally, protein interaction assays showed that ClNF-YB9 interacts with all ClNF-YCs and the ClNF-YB9-YC4 heterodimer was able to recruit a ClNF-YA7 subunit to assemble a complete NF-Y complex, which may function in seed development. This study revealed the structure and evolutionary relationships of the NF-Y gene family in Cucurbitaceae and the novel function of ClNF-YB9 in regulating seed development in watermelon. 展开更多
关键词 WATERMELON NF-Y gene family Evolution relationship ClNF-YB9 gene function Seed development
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Research progress and application of the CRISPR/Cas9 gene-editing technology based on hepatocellular carcinoma 被引量:1
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作者 Shijing Yu Ruirui Zhao +5 位作者 Bingchen Zhang Chunmei Lai Linyan Li Jiangwen Shen Xiarong Tan Jingwei Shao 《Asian Journal of Pharmaceutical Sciences》 SCIE CAS 2023年第4期1-21,共21页
Hepatocellular carcinoma(HCC)is now a common cause of cancer death,with no obvious change in patient survival over the past few years.Although the traditional therapeutic modalities for HCC patients mainly involved in... Hepatocellular carcinoma(HCC)is now a common cause of cancer death,with no obvious change in patient survival over the past few years.Although the traditional therapeutic modalities for HCC patients mainly involved in surgery,chemotherapy,and radiotherapy,which have achieved admirable achievements,challenges are still existed,such as drug resistance and toxicity.The emerging gene therapy of clustered regularly interspaced short palindromic repeat/CRISPR-associated nuclease 9-based(CRISPR/Cas9),as an alternative to traditional treatment methods,has attracted considerable attention for eradicating resistant malignant tumors and regulating multiple crucial events of target gene-editing.Recently,advances in CRISPR/Cas9-based anti-drugs are presented at the intersection of science,such as chemistry,materials science,tumor biology,and genetics.In this review,the principle as well as statues of CRISPR/Cas9 technique were introduced first to show its feasibility.Additionally,the emphasis was placed on the applications of CRISPR/Cas9 technology in therapeutic HCC.Further,a broad overview of non-viral delivery systems for the CRISPR/Cas9-based anti-drugs in HCC treatment was summarized to delineate their design,action mechanisms,and anticancer applications.Finally,the limitations and prospects of current studies were also discussed,and we hope to provide comprehensively theoretical basis for the designing of anti-drugs. 展开更多
关键词 Hepatocellular carcinoma CRISPR/Cas9 Screen gene Delivery strategy
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The collagen type Ⅰ alpha 1 chain gene is an alternative safe harbor locus in the porcine genome 被引量:1
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作者 XIANG Guang-ming ZHANG Xiu-ling +9 位作者 XU Chang-jiang FAN Zi-yao XU Kui WANG Nan WANG Yue CHE Jing-jing XU Song-song MU Yu-lian LI Kui LIU Zhi-guo 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2023年第1期202-213,共12页
Efficient and stable expression of foreign genes in cells and transgenic animals is important for gain-of-function studies and the establishment of bioreactors.Safe harbor loci in the animal genome enable consistent o... Efficient and stable expression of foreign genes in cells and transgenic animals is important for gain-of-function studies and the establishment of bioreactors.Safe harbor loci in the animal genome enable consistent overexpression of foreign genes,without side effects.However,relatively few safe harbor loci are available in pigs,a fact which has impeded the development of multi-transgenic pig research.We report a strategy for efficient transgene knock-in in the endogenous collagen type I alpha 1 chain(COL1A1)gene using the clustered regularly interspaced short palindromic repeats/CRISPR-associated protein 9(CRISPR/Cas9)system.After the knock-in of a 2A peptide-green fluorescence protein(2A-GFP)transgene in the last codon of COL1A1 in multiple porcine cells,including porcine kidney epithelial(PK15),porcine embryonic fibroblast(PEF)and porcine intestinal epithelial(IPI-2I)cells,quantitative PCR(qPCR),Western blotting,RNA-seq and CCK8 assay were performed to assess the safety of COL1A1 locus.The qPCR results showed that the GFP knock-in had no effect(P=0.29,P=0.66 and P=0.20 for PK15,PEF and IPI-2I cells,respectively)on the mRNA expression of COL1A1 gene.Similarly,no significant differences(P=0.64,P=0.48 and P=0.80 for PK15,PEF and IPI-2I cells,respectively)were found between the GFP knock-in and wild type cells by Western blotting.RNA-seq results revealed that the transcriptome of GFP knock-in PEF cells had a significant positive correlation(P<2.2e–16)with that of the wild type cells,indicating that the GFP knock-in did not alter the global expression of endogenous genes.Furthermore,the CCK8 assay showed that the GFP knock-in events had no adverse effects(P_(24)h=0.31,P_(48)h=0.96,P_(72)h=0.24,P_(96)h=0.17,and P_(120)h=0.38)on cell proliferation of PK15 cells.These results indicate that the COL1A1 locus can be used as a safe harbor for foreign genes knock-in into the pig genome and can be broadly applied to farm animal breeding and biomedical model establishment. 展开更多
关键词 COL1A1 gene safe harbor KNOCK-IN CRISPR/Cas9 PIG
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Neurologic orphan diseases:Emerging innovations and role for genetic treatments 被引量:1
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作者 Ivelina P Kioutchoukova Devon T Foster +5 位作者 Rajvi N Thakkar Marco A Foreman Brandon J Burgess Rebecca M Toms Eduardo E Molina Valero Brandon Lucke-Wold 《World Journal of Experimental Medicine》 2023年第4期59-74,共16页
Orphan diseases are rare diseases that affect less than 200000 individuals within the United States.Most orphan diseases are of neurologic and genetic origin.With the current advances in technology,more funding has be... Orphan diseases are rare diseases that affect less than 200000 individuals within the United States.Most orphan diseases are of neurologic and genetic origin.With the current advances in technology,more funding has been devoted to developing therapeutic agents for patients with these conditions.In our review,we highlight emerging options for patients with neurologic orphan diseases,specifically including diseases resulting in muscular deterioration,epilepsy,seizures,neurodegenerative movement disorders,inhibited cognitive development,neuron deterioration,and tumors.After extensive literature review,gene therapy offers a promising route for the treatment of neurologic orphan diseases.The use of clustered regularly interspaced palindromic repeats/Cas9 has demonstrated positive results in experiments investigating its role in several diseases.Additionally,the use of adeno-associated viral vectors has shown improvement in survival,motor function,and developmental milestones,while also demonstrating reversal of sensory ataxia and cardiomyopathy in Friedreich ataxia patients.Antisense oligonucleotides have also been used in some neurologic orphan diseases with positive outcomes.Mammalian target of rapamycin inhibitors are currently being investigated and have reduced abnormal cell growth,proliferation,and angiogenesis.Emerging innovations and the role of genetic treatments open a new window of opportunity for the treatment of neurologic orphan diseases. 展开更多
关键词 Neurologic orphan diseases gene therapy Clustered regularly interspaced palindromic repeats/Cas9 Antisense oligonucleotides Adeno-associated virus mTOR inhibitors
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Genome-wide identification of the MATE gene family and functional characterization of PbrMATE9 related to anthocyanin in pear
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作者 Jiawen Sheng Xuening Chen +4 位作者 Bobo Song Hainan Liu Jiaming Li Runze Wang Jun Wu 《Horticultural Plant Journal》 SCIE CAS CSCD 2023年第6期1079-1094,共16页
Plant multidrug and toxic compound extrusion(MATE) genes play an important role in the process of detoxification, plant morphogenesis, and anthocyanin accumulation. However, whether the MATE gene family functions in p... Plant multidrug and toxic compound extrusion(MATE) genes play an important role in the process of detoxification, plant morphogenesis, and anthocyanin accumulation. However, whether the MATE gene family functions in pear peel coloration is still unknown. To evaluate and identify the MATE gene family members which are involving in anthocyanin accumulation and coloration in pear. In this study, 85 MATE genes were identified in the reference pear genome of ‘Dangshansuli’ through genome-wide identification. Based on gene structure and phylogenetic tree analysis, the MATE family was divided into five subfamilies. RNA sequencing and quantitative real-time polymerase chain reaction(qRTPCR) indicated that the expression patterns of PbrMATEs were tissue-specific. 28.24%(24) of PbrMATE genes were expressed in the fruits, and44.71%(38) of PbrMATE genes were expressed in the leaves. Additionally, we found that the expression levels of PbrMATE9, PbrMATE26,PbrMATE50, and PbrMATE69 in debagged fruits with red peel were significantly higher than those in bagged fruits without red peel, according to our bagging/debagging treatment of ‘Mantianhong’. The expression pattern of PbrMATE9 was consistent with the variation trend in anthocyanin content, suggesting that it might play an important role in anthocyanin accumulation in response to light exposure. Subcellular localization showed that PbrMATE9 was a membrane protein. More strikingly, the transient overexpression of PbrMATE9 promoted anthocyanin accumulation in the peel of pear, and the expression of structural genes(PbrCHI, PbrANS, PbrDFR, and PbrUFGT) in the anthocyanin biosynthesis pathway also increased significantly. Through co-expression network analysis, the transcription factors were identified, such as WRKY, COL,GATA, and BBX, which might be involved in the regulation of PbrMATE9. The study has enriched the genetic resources and improved the understanding of the regulation network of anthocyanin accumulation in pear. 展开更多
关键词 PEAR ANTHOCYANIN COLORATION MATE gene family PbrMATE9 RNA-SEQ
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Gene Repair of iPSC Line with GARS (G294R) Mutation of CMT2D Disease by CRISPR/Cas9
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作者 Pei-jie LU Pei ZHANG +8 位作者 Yu-chun LIU Na JING Ya-nan GUO Peng-shuai WANG Lin-lin SU Qi GUO Qiang MA Yu-ming XU Shou-tao ZHANG 《Current Medical Science》 SCIE CAS 2023年第2期261-267,共7页
Objective Charcot-Marie-Tooth disease(CMT)severely affects patient activity,and may cause disability.However,no clinical treatment is available to reverse the disease course.The combination of CRISPR/Cas9 and iPSCs ma... Objective Charcot-Marie-Tooth disease(CMT)severely affects patient activity,and may cause disability.However,no clinical treatment is available to reverse the disease course.The combination of CRISPR/Cas9 and iPSCs may have therapeutic potential against nervous diseases,such as CMT.Methods In the present study,the skin fibroblasts of CMT type 2D(CMT2D)patients with the c.880G>A heterozygous nucleotide mutation in the GARS gene were reprogrammed into iPSCs using three plasmids(pCXLE-hSK,pCXLE-hUL and pCXLE-hOCT3/4-shp5-F).Then,CRISPR/Cas9 technology was used to repair the mutated gene sites at the iPSC level.Results An iPSC line derived from the GARS(G294R)family with fibular atrophy was successfully induced,and the mutated gene loci were repaired at the iPSC level using CRISPR/Cas9 technology.These findings lay the foundation for future research on drug screening and cell therapy.Conclusion iPSCs can differentiate into different cell types,and originate from autologous cells.Therefore,they are promising for the development of autologous cell therapies for degenerative diseases.The combination of CRISPR/Cas9 and iPSCs may open a new avenue for the treatment of nervous diseases,such as CMT. 展开更多
关键词 Charcot-Marie-Tooth disease GARS CRISPR/Cas9 IPSCS gene therapy
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Bioinformatics and Functional Analysis of High Oleic Acid-Related Gene GmSAM22 in Soybean [Glycine max (L.) Merr.]
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作者 Shuo Qu Qi Cai +4 位作者 Huimin Cui Lamboro Abraham Yaolei Jiao Guilong Ma Piwu Wang 《Phyton-International Journal of Experimental Botany》 SCIE 2023年第2期501-519,共19页
High yield,high quality,stable yield,adaptability to growth period,and modern mechanization are the basic requirements for crops in the 21st century.Soybean oleic acid is a natural unsaturated fatty acid with strong a... High yield,high quality,stable yield,adaptability to growth period,and modern mechanization are the basic requirements for crops in the 21st century.Soybean oleic acid is a natural unsaturated fatty acid with strong antioxidant properties and stability.Known as a safe fatty acid,it has the ability to successfully prevent cardiovascular and cerebrovascular disorders.Improving the fatty acid composition of soybean seeds,can not only speed up the breeding process of high-quality high-oil and high-oleic soybeans,but also have important significance in human health,and provide the possibility for the development of soybean oil as a new energy source.Hence,the aim of this study was to analyze the high oleic acid elated gene GmSAM22 in soybean.In this research the soybean oleic acid-related gene GmSAM22 was screened out by Genome-wide association analysis,a 662 bp fragment was acquired by specific PCR amplification,and the pMD18T cloning vector was linked by the use of a seamless cloning technique.Bioinformatics analysis of the signal peptide prediction,subcellular localization,protein hydrophobicity,transmembrane region analysis,a phosphorylation site,protein secondary and tertiary structure and protein interaction analysis of the protein encoded by the SAM22 gene was carried out.The plasmid of the gene editing vector is pBK041.The overexpression vector was transformed from pCAMBIA3301 as the base vector,and overexpression vector were designed.Positive plants were obtained by genetic transformation by the pollen tube channel method.Fluorescence quantitative PCR was performed on the T2 generation plants to detect the relative expression levels in different tissues.Southern Blot was used to detect the presence of hybridization signal.Screening genes BAR,35S,and NOS in plants were identified by conventional PCR.10 seeds with high and low oleic acid content were chosen for quantitative PCR identification,and finally,the concentration and morphology of soybean fatty acids were identified by nearfar infrared spectroscopy.On 10 seeds with an upper and lower oleic acid content,a quantitative fluorescence analysis was done.In Southern blot hybridization,the SAM22 gene was integrated into the recipient soybean plant in hands of a sole copy.Fluorescence quantitative PCR appeared that the average relative expression of the SAM22 gene in roots,stems,leaves,and seeds was 1.70,1.67,3.83,and 4.41,respectively.Positive expression seeds had a 4.77%increase in oleic acid content.The level of oleic acid in the altered seeds was reduced by 4.13%when compared to CK,and it was discovered that the GmSAM22 gene could be a regulatory and secondary gene that promotes the conversion of stearic acid to oleic acid in soybean.There has not been a discussion of gene cloning or functional verification.The cloning and genetic transformation of the soybean SAM22 gene can effectively increase the content of oleic acid,which lays a foundation for the study of soybean with high oleic acid. 展开更多
关键词 SOYBEAN SAM22 gene oleic acid CLONING CRISPR/Cas9 expression vector
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Negative regulation of miRNA-9 on oligodendrocyte lineage gene 1 during hypoxic-ischemic brain damage 被引量:5
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作者 Lijun Yang Hong Cui Ting Cao 《Neural Regeneration Research》 SCIE CAS CSCD 2014年第5期513-518,共6页
Oligodendrocyte lineage gene 1 plays a key role in hypoxic-ischemic brain damage and myelin repair, miRNA-9 is involved in the occurrence of many related neurological disorders. Bioin- formatics analysis demonstrated ... Oligodendrocyte lineage gene 1 plays a key role in hypoxic-ischemic brain damage and myelin repair, miRNA-9 is involved in the occurrence of many related neurological disorders. Bioin- formatics analysis demonstrated that miRNA-9 complementarily, but incompletely, bound oligodendrocyte lineage gene 1, but whether miRNA-9 regulates oligodendrocyte lineage gene 1 remains poorly understood. Whole brain slices of 3-day-old Sprague-Dawley rats were cultured and divided into four groups: control group; oxygen-glucose deprivation group (treatment with 8% O2 + 92% N2 and sugar-free medium for 60 minutes); transfection control group (after oxygen and glucose deprivation for 60 minutes, transfected with control plasmid) and miRNA-9 transfection group (after oxygen and glucose deprivation for 60 minutes, transfected with miRNA-9 plasmid). From the third day of transfection, and with increasing culture days, oligodendrocyte lineage gene 1 expression increased in each group, peaked at 14 days, and then decreased at 21 days. Real-time quantitative PCR results, however, demonstrated that oligoden- drocyte lineage gene 1 expression was lower in the miRNA-9 transfection group than that in the transfection control group at 1, 3, 7, 14, 21 and 28 days after transfection. Results suggested that miRNA-9 possibly negatively regulated oligodendrocyte lineage gene 1 in brain tissues during hypoxic-ischemic brain damage. 展开更多
关键词 nerve regeneration brain injury miRNA-9 oligodendrocyte lineage gene 1 hypox- ic-ischemic brain damage premature birth brain slice culture NSFC grant neural regeneration
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Improvements of TKC Technology Accelerate Isolation of Transgene-Free CRISPR/Cas9-Edited Rice Plants 被引量:2
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作者 HE Yubing ZHU Min +4 位作者 WANG Lihao WU Junhua WANG Qiaoyan WANG Rongchen ZHAO Yunde 《Rice science》 SCIE CSCD 2019年第2期109-117,I0016,I0017,共11页
Elimination of the CRISPR/Cas9 constructs in edited plants is a prerequisite for assessing genetic stability, conducting phenotypic characterization, and applying for commercialization of the plants. However, removal ... Elimination of the CRISPR/Cas9 constructs in edited plants is a prerequisite for assessing genetic stability, conducting phenotypic characterization, and applying for commercialization of the plants. However, removal of the CRISPR/Cas9 transgenes by genetic segregation and by backcross is laborious and time consuming. We previously reported the development of the transgene killer CRISPR(TKC) technology that uses a pair of suicide genes to trigger self-elimination of the transgenes without compromising gene editing efficiency. The TKC technology enables isolation of transgene-free CRISPR-edited plants within a single generation, greatly accelerating crop improvements. Here, we presented two new TKC vectors that show great efficiency in both editing the target gene and in undergoing self-elimination of the transgenes. The new vectors replaced the CaMV35 S promoter used in our previous TKC vector with two rice promoters to drive one of the suicide genes, providing advantages over our previous TKC vector under certain conditions. The vectors reported here offered more options and flexibility to conduct gene editing experiments in rice. 展开更多
关键词 GENOME EDITING SUICIDE gene TRANSgene KILLER CRISPR Cas9 transgene-free
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原发性红斑肢痛症一家系SCN9A基因突变 被引量:10
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作者 李颂 杨勇 +4 位作者 王云 徐哲 卜定方 涂平 朱学骏 《临床皮肤科杂志》 CAS CSCD 北大核心 2005年第2期72-74,共3页
目的:研究原发性红斑肢痛症一家系成员中SCN9A基因的突变情况。方法:采用酚-氯仿法提取基因组DNA,对原发性红斑肢痛症一个家系成员的SCN9A基因外显子进行测序,并与正常序列进行对比。结果:在此家系的患者中发现了一个新的基因突变,患者S... 目的:研究原发性红斑肢痛症一家系成员中SCN9A基因的突变情况。方法:采用酚-氯仿法提取基因组DNA,对原发性红斑肢痛症一个家系成员的SCN9A基因外显子进行测序,并与正常序列进行对比。结果:在此家系的患者中发现了一个新的基因突变,患者SCN9A基因的第2572个碱基由胞嘧啶(C)突变为胸腺嘧啶(T),对应的氨基酸改为Leu858Phe。结论:在该家系红斑肢痛症患者中发现的突变基因证明为该病的致病基因,对明确该病的基因型和表型之间的关系提供了新的证据,为进一步开展基因诊断和研究其发病机制、探索治疗药物提供了依据。 展开更多
关键词 红斑肢痛症 原发性 基因 scn9a 突变
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5例原发性红斑肢痛症患者SCN9A基因突变检测 被引量:2
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作者 林志淼 李岩 +3 位作者 张黎黎 曹先伟 张燕灵 杨勇 《临床皮肤科杂志》 CAS CSCD 北大核心 2008年第8期506-508,共3页
目的:检测5例原发性红斑肢痛症患者SCN9A基因的突变情况。方法:收集患者临床资料,提取外周血DNA,采用PCR扩增SCN9A基因编码区的全部外显子及其侧翼序列并测序。结果:在5例患者中分别发现SCN9A基因4个新的突变位点(L823R、Q10R、V872G、S... 目的:检测5例原发性红斑肢痛症患者SCN9A基因的突变情况。方法:收集患者临床资料,提取外周血DNA,采用PCR扩增SCN9A基因编码区的全部外显子及其侧翼序列并测序。结果:在5例患者中分别发现SCN9A基因4个新的突变位点(L823R、Q10R、V872G、S211P)及1个已报道过的突变(I848T)。在50名正常人对照中未发现相同突变。结论:SCN9A基因的L823R、Q10R、V872G、S211P及I848T突变可能为引起这5例患者临床症状的病因。 展开更多
关键词 红斑肢痛症 原发性 基因 scn9a 基因突变
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SCN9A基因突变癫痫患儿基因型与表型分析 被引量:4
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作者 丁健 张静雯 +4 位作者 郭予雄 王林淦 张宇昕 陈志红 翟琼香 《中国医学创新》 CAS 2020年第10期27-30,共4页
目的:探讨SCN9A基因突变癫痫患儿基因型与表型的特点。方法:收集2016年6月-2018年5月广东省人民医院儿科就诊的癫痫患儿,采用全外显子组测序筛选突变,并采用Sanger测序方法验证突变。结果:共发现6例患儿存在SCN9A基因突变,男女各3例,检... 目的:探讨SCN9A基因突变癫痫患儿基因型与表型的特点。方法:收集2016年6月-2018年5月广东省人民医院儿科就诊的癫痫患儿,采用全外显子组测序筛选突变,并采用Sanger测序方法验证突变。结果:共发现6例患儿存在SCN9A基因突变,男女各3例,检测到6个不同位点的突变,均为杂合错义突变,且为遗传性突变,导致了氨基酸改变,其中5例突变位点分布在高度保守的区域。临床发作类型:4例(66.7%)全面性强直-阵挛发作,1例(16.7%)局灶性发作,1例(16.7%)失张力发作;3例(50.0%)患儿发作有热敏感特点。有多种临床表型,热性惊厥附加症1例,遗传性癫痫伴热性惊厥附加症1例,Dravet综合征1例,额叶癫痫1例,不明分类的癫痫2例。结论:SCN9A基因突变以杂合的错义突变为主,大部分突变定位在高度保守的区域,发作类型以全面性发作为主,多数与热相关,临床表型谱广。 展开更多
关键词 scn9a基因 突变 癫痫 表型
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原发性红斑肢痛症中SCN9A基因的突变热点 被引量:3
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作者 张黎黎 林志淼 +3 位作者 马志红 杨艳玲 于力 杨勇 《中国皮肤性病学杂志》 CAS 北大核心 2006年第11期649-651,共3页
目的研究原发性红斑肢痛症1个家系及两个散发病例的SCN9A基因突变情况,探讨该基因的突变热点。方法提取基因组DNA,PCR扩增SCN9A所有外显子并测序,对比分析已报道的SCN9A基因突变。结果在该家系患者发现SCN9A基因突变为C1185G,对应氨基... 目的研究原发性红斑肢痛症1个家系及两个散发病例的SCN9A基因突变情况,探讨该基因的突变热点。方法提取基因组DNA,PCR扩增SCN9A所有外显子并测序,对比分析已报道的SCN9A基因突变。结果在该家系患者发现SCN9A基因突变为C1185G,对应氨基酸改变为N395K,两个散发病例SCN9A基因突变均为T2543C,对应氨基酸改变为I848T;这两个突变位点在既往文献中均有报道。结论SCN9A基因N395K和I848T突变为该家系和散发患者出现临床症状的原因,推测L858,I848和N395可能为该基因的突变热点。 展开更多
关键词 原发性红斑肢痛症 scn9a基因 基因突变 突变热点
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