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Globin-like蛋白质折叠类型识别 被引量:8
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作者 任文科 徐海松 李晓琴 《生物化学与生物物理进展》 SCIE CAS CSCD 北大核心 2008年第5期548-554,共7页
蛋白质折叠类型识别是蛋白质结构研究的重要内容.以SCOP中的Globin-like折叠为研究对象,选择其中序列同一性小于25%的17个代表性蛋白质为训练集,采用机器和人工结合的办法进行结构比对,产生序列排比,经过训练得到了适合Globin-like折叠... 蛋白质折叠类型识别是蛋白质结构研究的重要内容.以SCOP中的Globin-like折叠为研究对象,选择其中序列同一性小于25%的17个代表性蛋白质为训练集,采用机器和人工结合的办法进行结构比对,产生序列排比,经过训练得到了适合Globin-like折叠的概形隐马尔科夫模型(profile HMM)用于该折叠类型的识别.以Astral1.65中的68057个结构域样本进行检验,识别敏感度为99.64%,特异性100%.在折叠类型水平上,与Pfam和SUPERFAMILY单纯使用序列比对构建的HMM相比,所用模型由多于100个归为一个,仍然保持了很高的识别效果.结果表明:对序列相似度很低但具有相同折叠类型的蛋白质,可以通过引入结构比对的方法建立统一的HMM模型,实现高准确率的折叠类型识别. 展开更多
关键词 蛋白质 折叠类型识别 globin-like 隐马尔科夫模型 结构比对
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ISOBUTYRAMIDE ACTIVATES TRANSCRIPTION OF HUMAN FETAL γ-AND MURINE EMBRYONIC εy-GLOBIN GENES
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作者 张俊武 张雪青 陈平 《Chinese Medical Sciences Journal》 CAS CSCD 2001年第4期187-193,共7页
Objective. To examine the effect of isobutyramide synthesized in our laboratory on human and murine globin gene expression and to test cell toxicity ofthe drug.Methods. MEL cells were transfected with the recombinant ... Objective. To examine the effect of isobutyramide synthesized in our laboratory on human and murine globin gene expression and to test cell toxicity ofthe drug.Methods. MEL cells were transfected with the recombinant construct μLCRAγψβδβand the stable transformants were cultured in the medium with different concentrations of isobutyramide. The experimental mice and rabbit were injected with different doses of isobutyramide. The globin mRNAs were analyzed by RNase protection assay. The hematological toxicity and electrolyte toxicity ofthe drug were tested.Results. An inducible and dose dependent expression of the human γ , β and mouse α globin gene was observed in the transfected MEL cells. The induction of the human γ globin gene is significant stronger than that of the β globin gene. With 2.5~5 mmol/L isobutyramide, the induction of the human γ globin gene is even more effective than that of mouse α globin gene. After a 15 day injection under the doses of 500~900mg·kg-1·d-1, the level of the mouse embryonic εy globin mRNA could be significantly induced up to 3~4 fold of that of uninjected controls. The changes of hemoglobin(Hb), RBC, hematocrit(HCT), WBC, derived from mice injected with different doses of isobutyramide at the interval of 24 hours for 2~4 weeks, were generally within the normal range. In rabbits injected with isobutyramide in the same regiment for 2 weeks, the concentration of blood K+, Na+, Cl-and CO2 were all within normal range and serum ionic osmotic pressure remained stable as well. Conclusion. Our results suggested that isobutyramide is a weak inducer ofcell differentiation, but it can selectively activate transcription of human γ globin gene at a certain degree, and it can act on early stages of erythroid progenitor differentiation in adult mice and activate transcription of embryonic εy-globin gene and have no hematological toxicity. Our results have further proved the potential value of isobutyramide in treatment of β-thalassemia and sickle cell disease. 展开更多
关键词 isobutyramide human fetal γ globin gene murine embryonic εy globin gene β thalassemia
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Co-Inheritance of Beta &Delta-Globin Gene (HbYialousa) Mutations in an Iranian <i>β</i>-Thalassemia Carrier
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作者 Atefeh Valaei Farnaz Eghbalpour +4 位作者 Zahra Kainimoghaddam Fatemeh Bayat Maryam Taghavi Basmanj Morteza Karimipoor Sirous Zeinali 《International Journal of Clinical Medicine》 2012年第7期633-636,共4页
Introduction: Beta-thalassemia is characterized by absence or reduced synthesis of the β-globin. Carriers of β-thalas- semia, typically have microcytic hypochromic anemia and elevated hemoglobin HbA2 and normal HbF ... Introduction: Beta-thalassemia is characterized by absence or reduced synthesis of the β-globin. Carriers of β-thalas- semia, typically have microcytic hypochromic anemia and elevated hemoglobin HbA2 and normal HbF level. On the other hand carriers of severe alpha-thalassemia also have similar CBC parameters to that of β-thalassemia with normal HbA2 level. Co-presence of mutations in the β-globin and delta-globin genes (point mutations or deletions) usually give normal HbA2 and elevated HbF level. We report a β-thal carrier with normal level of HbA2 and increased level of HbF who had a point mutation in CD39 on the beta-globin gene and a point mutation in CD27 on the δ-globin gene named Hb-Yialousa. Materials & Methods: An individual with low hematological indices, normal HbA2 and elevated HbF was referred to our center as routine premarital screening program. Mutations in the β-globin and δ-globin genes were screened using ARMS and sequencing methods. Results: The mutation in β- and δ-globin genes were identified as CD39 and CD27 (HbYialousa) respectively. No point mutation or deletion in α-globin gene was identified. Discussion: We showed that normal HBA2 with elevated HbF level is due to co-inheritance of delta-globin gene mutation with mutation in the β-globin gene. When screening for β-thalassemia, one has to either rule out presence of α-globin gene mutation of mutation in the delta-globin gene. 展开更多
关键词 δ-globin GENE Β-THALASSEMIA HbYialousa Β-globin GENE CD39
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Incidence of Sickle Cell Disease and Other Hemoglobinopathies in Burkina Faso: Results of a Five-Year Systematic Neonatal Screening (2015-2019) in Four Urban Hospitals
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作者 Salam Sawadogo Koumpingnin Nebie +7 位作者 Donatien Kima Hélène Traore Savadogo Jean De Dieu Sanou Dieudonné Ouedraogo Paul Ouedraogo Hyacinthe Zamane Abdoulaye Ndiaye Eléonore Kafando 《Open Journal of Blood Diseases》 CAS 2022年第4期87-97,共11页
Hemoglobinopathies, mainly Sickle cell disease (SCD), are the most common monogenic disorders in Africa. In Burkina Faso, data on these diseases are scarce, mainly hospital-based in Ouagadougou and its surroundings. I... Hemoglobinopathies, mainly Sickle cell disease (SCD), are the most common monogenic disorders in Africa. In Burkina Faso, data on these diseases are scarce, mainly hospital-based in Ouagadougou and its surroundings. In order to assess the incidence and allelic frequencies of the main hemoglobinopathies in newborns in Burkina Faso, we conducted a cross-sectional study from 2015 to 2019 in four hospitals. The study included babies of both sexes, regardless of ethnic group and parents’ hemoglobin status. It was a newborn screening and hemoglobin variants were detected using isoelectric focusing on cord blood samples and confirmed using hemoglobin electrophoresis by high-performance liquid chromatography. The proportions and cumulative incidences of the different hemoglobinopathies were computed. Hardy-Weinberg equilibrium law was applied to calculate genotypic and allelic frequencies. The significant level was p < 0.05. Out of 11,337 newborns included, 47.8% were males and 60.2% were from Bobo-Dioulasso. Abnormal hemoglobin was found in 27.1%, representing a cumulative incidence of 1:4 newborns. The incidence of SCD was 1.9% (1:53 newborns) with 27.9% of homozygous SS. Homozygous CC and compound heterozygous Cβ-Thalassemia accounted for 1.1%. SCD cases were 1.51 times higher in Bobo-Dioulasso (OR = 1.51;95% CI [1.09 - 2.10]: p = 0.013). The observed genotype frequencies were significantly different from the expected ones (p 0.001). The βS and βC alleles represented 5.1 and 9.9%, respectively. This study showed a high incidence of hemoglobinopathies. Such results raise the question of control strategies for these hemoglobinopathies in our country. 展开更多
关键词 Abnormal Hemoglobin β-globin Gene Newborn Screening Isoelectric Focusing
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乌鳢globin基因家族的鉴定及在鳃和鳃上器官中的表达模式分析
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作者 陶泽鑫 李建龙 +4 位作者 温海深 李超 孙冬磊 陈基伟 李昀 《中国海洋大学学报(自然科学版)》 CAS CSCD 北大核心 2023年第3期141-151,共11页
为了探究珠蛋白(Globin)在具有耐低氧和空气呼吸能力的乌鳢(Channa argus)中发挥的作用,本文对乌鳢的globin基因家族进行研究。在基因组中鉴定得到18个globin基因,分属于Hb、Mb、Ngb和Cygb四个亚家族,其中Hb亚家族拷贝数最多,达14个,其... 为了探究珠蛋白(Globin)在具有耐低氧和空气呼吸能力的乌鳢(Channa argus)中发挥的作用,本文对乌鳢的globin基因家族进行研究。在基因组中鉴定得到18个globin基因,分属于Hb、Mb、Ngb和Cygb四个亚家族,其中Hb亚家族拷贝数最多,达14个,其余各亚家族仅有1~2个拷贝。系统进化分析表明,乌鳢globin基因与硬骨鱼类聚为一枝,在进化上较为保守。对乌鳢globin基因结构分析得到4种保守结构域和5个motif。利用转录组测序技术对仔稚鱼(受精后3~8 d)和幼鱼(4月龄)的鳃和鳃上器官中globin基因进行表达量检测。在仔稚鱼中,hbae1(包括hbae1.1、hbae1.2和hbae1.3)、hbb2(包括hbb2.1、hbb2.2和hbb2.4)和hbaa的表达量在鳃上器官发育过程中呈显著升高趋势,而hba1和hbb1的表达量则显著降低。在幼鱼中,在空气暴露胁迫后,hbb2.2和cygb的表达量在鳃和鳃上器官中均发生显著变化,hbae1.1、hbae1.2和hbba的表达量在鳃中发生显著变化,hbae1.3和hbb2.1的表达量在鳃上器官中发生显著变化。这些在鳃上器官发育过程中和空气暴露胁迫中表达量出现显著变化的globin基因可能在乌鳢空气呼吸及低氧胁迫中发挥了生物学功能。 展开更多
关键词 乌鳢 空气呼吸 globin基因 空气暴露
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Intragenic and intergenic sequences regulating the expression of the 5'-to-5' linked adult α-and β-globin genes from large yellow croaker Pseudosciaena crocea 被引量:1
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作者 CHU Wuying YU Lian +5 位作者 QIAN Ronghua MENG Tao ZHOU Ruixue FU Guihong CHEN Jia ZHANG Jianshe 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2008年第5期126-133,共8页
One adult α-globin gene and one β-globin gene have been cloned from the large yellow croaker Pseudosciaena crocea. Linkage analysis indicated that the α- and β-globin genes were oriented head-to-head relative to e... One adult α-globin gene and one β-globin gene have been cloned from the large yellow croaker Pseudosciaena crocea. Linkage analysis indicated that the α- and β-globin genes were oriented head-to-head relative to each other. To identify the regulatory elements present in the intergenic and intragenic regions of the globin complex, the intergenic region alone or together with the β-globin gene first intron was cloned into the luciferase-reporter vector pGL3-Basic respectively, and the chimeric constructs were tran- siently transfected into Vero cells and primary fish erythrocytes. The intergenic region cannot support the high-level expression of luciferase. However, the promoter activity of the intergenic region was strongly stimulated by the positive regulatory elements (PRE) located in the β-globin gene intron 1. Thus, it is proposed that the intergenic promoters and intragenic PRE were necessary for the effective expression of the linked α- and β-globin genes. 展开更多
关键词 globin INTERGENIC intragenic INTRON large yellow croaker PROMOTER regulation
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Chromatin-binding in vivo of the erythroid kruppel-like factor,EKLF,in the murine globin loci 被引量:2
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作者 Yu-Chiau Shyu Shau-Ching Wen +6 位作者 Tung-Liang Lee Xin Chen Chia-Tse Hsu Hsin Chen Ruei-Lin Chen Jau-Lang Hwang Che-Kun James Shen 《Cell Research》 SCIE CAS CSCD 2006年第4期347-355,共9页
EKLF is an erythroid-specific, zinc finger-containing transcription factor essential for the activation of the mammalian beta globin gene in erythroid cells of definitive lineage. We have prepared a polyclonal anti-mo... EKLF is an erythroid-specific, zinc finger-containing transcription factor essential for the activation of the mammalian beta globin gene in erythroid cells of definitive lineage. We have prepared a polyclonal anti-mouse EKLF antibody suitable for Western blotting and immunoprecipitation (IP) qualities, and used it to define the expression patterns of the EKLF protein during mouse erythroid development. We have also used this antibody for the chromatin-immunoprecipitation (CHIP) assay. EKLF was found to bind in vivo at both the mouse beta-major-globin promoter and the HS2 site of beta-LCR in the mouse erythroleukemia cells (MEL) in a DMSO-inducible manner. The DMSO-induced bindings of EKLF as well as three other proteins, namely, RNA polymerase Ⅱ, acetylated histone H3, and methylated histone H3, were not abolished but significantly lowered in CB3, a MEL-derived cell line with null-expression of p45/NF-E2, an erythroid-enriched factor needed for activation of the mammalian globin loci. Interestingly, binding of EKLF in vivo was also detected in the mouse alpha-like globin locus, at the adult alpha globin promoter and its far upstream regulatory element alpha-MRE (HS26). This study provides direct evidence for EKLF-binding in vivo at the major regulatory elements of the mouse beta-like globin gene clusters the data also have interesting implications with respect to the role of EKLF-chromatin interaction in mammalian globin gene regulation. 展开更多
关键词 EKLF murine globin gene clusters chromatin-immunoprecipitation (CHIP) chromosome structure
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Identification and characterization of adult alpha-and beta-globin genes and their genomic arrangement in Pseudosciaena crocea 被引量:1
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作者 CHU Wuying QIAN Ronghua +3 位作者 WANG Lianshen YU Xiameng YOU Zhenqiang YU Lian 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2006年第4期65-76,共12页
The α- and β-globin genes from Pseudosciaena crocea were cloned by rapid amplification of cDNA 3 '-end ( 3 '-RACE). The cDNA of the α-globin is 595 bp with the ATG start codon located at Position 37, the TAA st... The α- and β-globin genes from Pseudosciaena crocea were cloned by rapid amplification of cDNA 3 '-end ( 3 '-RACE). The cDNA of the α-globin is 595 bp with the ATG start codon located at Position 37, the TAA stop codon at Position 469 and the AATAAA polyadenylation signal at Position 560, which codifies 145 amino acids. The entire open reading frame of the β-globin gene is 447 bp long, which encodes 148 amino acids. Amino acid identity of the α- globin or β-globin gene compared with those reported in other fish species, ranged from 31.9% to 76.4%. When comparing with human α- and β-globins, three important alterations in the structural regions can be noted: ct39 Thr→Gln, α113 His→Tyr and β117 His→Lys. The α-globin has a unique inserted amino acid residue in the 47th position. To understand the process of globin gene duplication and identify the regulatory elements present in the intergenic and intragenic regions of globin genes, the genomic arrangement of α- and β-globin genes was investigated. The results showed that the orientation of the two genes was head-to-head relative to each other. The intergenic region between the translation initiation codons of the linked α- and β-globin genes contains classical promoter elements and the length of it is much shorter than that reported in other fish. 展开更多
关键词 Pseudosciaena crocea globin gene cloning structural region HEAD-TO-HEAD regulatory elements
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PREDOMINANT EXPRESSION OF HUMAN Aγ-IN CONTRAST WITH β-GLOBIN GENE IN MEL CELLS TRANSFECTED WITH THE CONSTRUCT μLCRAγψβδ 被引量:1
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作者 张俊武 Stamatoyannopoulos,George 《Chinese Medical Sciences Journal》 CAS CSCD 1999年第1期31-37,共7页
A cosmid construct μLCRAγψβδβ were induced into mouse erythroleukemia cell lines 585 that expresses murine adult globin only and MEL GM 979 that expresses both murine embryonic and ad... A cosmid construct μLCRAγψβδβ were induced into mouse erythroleukemia cell lines 585 that expresses murine adult globin only and MEL GM 979 that expresses both murine embryonic and adult globins.Similar patterns of human globin gene expression were displayed in the two MEL cell lines transfected with the construct.Inducible expression of the Aγ and β gene was observed during induced cell differentiation.However,the expression level of the Aγ globin gene is much higher than that of the β globin gene in either uninduced or induced MEL transformants.No γ to β switching happened in the stable MEL transformants following a continuous culture.The much more effective enhance of the μLCR on the Aγ globin gene than that on the β globin gene is resulted probably from the fact that the distance between the LCR and the β globin gene is much longer than that between the LCR and the Aγ globin gene in the construct,in comparison with other constructs containing HS2 or μLCR linked to both of γ and β globin genes in different order.Two suggestions can be derived from these results:1) A competition between the γ and β globin gene for interaction with the LCR may indeed present,but only an enough long distance difference between the LCR to the γ and to the β gene can effectively influence the competition;2) Unlike transgenic mice,MEL cells are incapable of reconstructing the regulatory information involved in developmental control when it is provided by a fragment of the β globin gene cluster with limited length. 展开更多
关键词 human globin genes gene expression MEL cells
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Application of α-globin 3′hypervariable region to gene diagnosis of adult polycystic kidney disease
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作者 陈国强 曾瑞萍 《Journal of Medical Colleges of PLA(China)》 CAS 1993年第1期94-97,共4页
Seventy-four members from 9 adult polycystic kidney disease(APKD)familieswere analysed with Southern blot and 3′hypervariable region/Pvu Ⅱ,3′HVR/Bgl ⅡRFLPs.The results showed that 3′ HVR fragments were highly pol... Seventy-four members from 9 adult polycystic kidney disease(APKD)familieswere analysed with Southern blot and 3′hypervariable region/Pvu Ⅱ,3′HVR/Bgl ⅡRFLPs.The results showed that 3′ HVR fragments were highly polymorphic.Theheterozygote frequencies of Pvu Ⅱ,Bgl Ⅱ and PvuⅡ+Bg1Ⅱ fragments were 92%,84.7%and 98.6%,respectively.The maximum lod score for linkage between 3′HVR and APKDwas 9.71 at a recombination fraction 0.045.We successfully applied 3′HVR probe to thegene diagnosis of 17 symptomatic patients and 7 patients in the presymptomatic stage. 展开更多
关键词 globin KIDNEY POLYCYSTIC GENE DIAGNOSIS
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Retroviral mediated human β-globin gene transfer and expression in vitro
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作者 Depei Liu, Chih-Chuan Liang National Laboratory of Medical Molecular Biology, Institute of Basic Medical Sciences, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100005 《中国实验血液学杂志》 CAS CSCD 1997年第3期286-286,共1页
Retroviral mediated gene transfer of humanglobin gene into hematopoietic stem cells is apromising approach for thalassemia gene therapy.Major problem of the transferred globin gene was lowlevel expression of the gene ... Retroviral mediated gene transfer of humanglobin gene into hematopoietic stem cells is apromising approach for thalassemia gene therapy.Major problem of the transferred globin gene was lowlevel expression of the gene with its proximal cis-acting sequence. The locus control region (LCR) ofthe human β-globin gene cluster consists of four majorDNase I hypersensitive sites (HS). When linked 展开更多
关键词 globin HEMATOPOIETIC proximal HYPERSENSITIVE locus enhancer packaging Major transferred induction
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单分子实时测序在α珠蛋白基因三联体及其复合变异等位基因鉴定中的临床应用
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作者 张宇 方艳平 +3 位作者 朱碧青 梁丽仪 周万军 江凌晓 《国际检验医学杂志》 2025年第1期32-37,43,共7页
目的探究单分子实时测序(SMRT)技术在α珠蛋白基因三联体(简称α三联体)及其复合变异等位基因鉴定中的临床应用效果。方法收集α三联体阳性样本36例,其中经PCR-导流杂交技术确认28例、经高通量测序(NGS)技术确认8例。36例样本包含α三... 目的探究单分子实时测序(SMRT)技术在α珠蛋白基因三联体(简称α三联体)及其复合变异等位基因鉴定中的临床应用效果。方法收集α三联体阳性样本36例,其中经PCR-导流杂交技术确认28例、经高通量测序(NGS)技术确认8例。36例样本包含α三联体复合变异顺式或反式排列未明样本ααα^(anti4.2)复合α^(CS)α2例,ααα^(anti4.2)复合-α^(3.7)10例,HKαα/--SEA型待确证2例,均采用SMRT技术进行地中海贫血(简称地贫)基因检测。另招募一个基因型为ααα^(anti4.2)复合-α^(3.7)变异病例的家系,包含先证者(Ⅱ-1)和其父亲(Ⅰ-1)、母亲(Ⅰ-2),采用PCR-导流杂交和SMRT技术进行地贫基因检测。结果SMRT技术检测结果显示,36例样本中共检出35例α三联体,1例αααα^(anti4.2)型α珠蛋白基因四联体(简称α四联体)。2例ααα^(anti4.2)复合α^(CS)α变异样本中ααα^(anti4.2)与α^(CS)α均为反式排列,基因型为ααα^(anti4.2)/α^(CS)α,10例ααα^(anti4.2)复合-α^(3.7)变异样本中ααα^(anti4.2)与-α^(3.7)为顺式排列样本9例,基因型为HKαα/αα,ααα^(anti4.2)与-α^(3.7)为反式排列样本1例,基因型为ααα^(anti4.2)/-α^(3.7)。相较PCR-导流杂交技术,SMRT技术多检出1例大片段缺失型β珠蛋白基因变异和2例未知变异,阳性检出率提高10.71%(3/28)。家系分析表明,先证者(Ⅱ-1)ααα^(anti4.2)和-α^(3.7)变异均遗传自母亲(Ⅰ-2),其基因型为HKαα/αα,与SMRT技术检测结果一致。结论SMRT技术不仅能够准确检测α三联体、α四联体及其复合变异等位基因,而且具有高准确性、一步到位识别2种变异顺式或反式排列、地贫基因变异覆盖全等优势,具有良好的临床应用价值。 展开更多
关键词 α珠蛋白基因三联体 HKαα 单分子实时测序 PCR-导流杂交技术 高通量测序
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A novel erythroid differentiation related gene EDRF1 upregulating globin gene expression in HEL cells
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作者 王敦成 黎燕 沈倍奋 《Chinese Medical Journal》 SCIE CAS CSCD 2002年第11期1701-1705,154-155,共5页
OBJECTIVE: To further characterize the differentiation inducing properties of EDRF1 and demonstrate its functional pathway involved in regulation of globin gene expression. METHODS: By transfecting EDRF1 sense and ant... OBJECTIVE: To further characterize the differentiation inducing properties of EDRF1 and demonstrate its functional pathway involved in regulation of globin gene expression. METHODS: By transfecting EDRF1 sense and antisense constructs into HEL cells, we identified the expression of globin and erythropoietin receptor genes by Northern blot analysis. RT-PCR and EMSA (electrophoresis mobility shift assay) were performed to monitor the expression and DNA-binding activity of erythroid specific transcription factors GATA-1 and NF-E2. RESULTS: It was shown that when EDRF1 was overexpressed, production of alpha-globin increased. In antisense EDRF1, overexpression of HEL cells, significant loss of alpha-, gamma-globin mRNA synthesis was observed. The transcription of endogenous GATA-1 and NF-E2 mRNA expression were maintained at the same levels compared with control experiments. However, the transcription activity of GATA-1 was severely impaired. Expression of erythropoietin receptor gene was not influenced by EDRF1 gene overexpression. CONCLUSION: The results suggested that EDRF1 regulated alpha- and gamma-globin gene synthesis by modulating DNA-binding activity of GATA-1 transcription factor. 展开更多
关键词 Gene Expression Regulation Cell Differentiation Cells Cultured DNA-Binding Proteins Erythroid-Specific DNA-Binding Factors ERYTHROPOIESIS GATA1 Transcription Factor globinS Humans NF-E2 Transcription Factor NF-E2 Transcription Factor p45 Subunit RNA Messenger Transcription Factors Up-Regulation
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Immunosuppressant mycophenolic acid biosynthesis employs a new globin-like enzyme for prenyl side chain cleavage 被引量:2
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作者 Xiwei Chen Lu Wang +4 位作者 Jinmei Zhang Tao Jiang Changhua Hu Dehai Li Yi Zou 《Acta Pharmaceutica Sinica B》 SCIE CAS CSCD 2019年第6期1253-1258,共6页
Mycophenolic acid(MPA,1)and its derivatives are first-line immunosuppressants used in organ transplantation and for treating autoimmune diseases.Despite chemical synthetic achievements,the biosynthetic formation of a ... Mycophenolic acid(MPA,1)and its derivatives are first-line immunosuppressants used in organ transplantation and for treating autoimmune diseases.Despite chemical synthetic achievements,the biosynthetic formation of a seven-carbon carboxylic acid pharmacophore side chain of 1,especially the processes involving the cleavage of the prenyl side chain between DHMP(4)and DMMPA(5),remains unknown.In this work,we identified a membrane-bound prenyltransferase,PgMpaA,that transfers FPP to 4 to yield FDHMP(6).Compound 6 undergoes the first cleavage step via a new globin-like enzyme PgMpaB to form a cryptic intermediate 12.Heterologous expression of PgMpa genes in Aspergillus nidulans demonstrates that the second cleavage step(from 12 to 5)of 1 is a PgMpa clusterindependent process in vivo.Our results,especially the discovery of the broad tolerance of substrates recognized by PgMpaB,set up a strategy for the formation of"pseudo-isopentenyl"natural products using fungal globin-like enzymes. 展开更多
关键词 BIOSYNTHESIS Mycophenolic acid PRENYLATION C-C bond CLEAVAGE globin ENZYME
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Treatment of β-Thalassemia With Hydroxyurea (HU)——Effects of HU on Globin Gene Expression 被引量:1
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作者 黄淑帧 任兆瑞 +5 位作者 陈美珏 许洪平 曾溢滔 G.P.Rodgers 曾凡一 A.N.Schechter 《Science China Chemistry》 SCIE EI CAS 1994年第11期1350-1359,共10页
A newly developed method of RT-PCR/competitive PCR for measuring the relative and ab-solute content of globin mRNAs as well as micro-globin chain biosynthetic assay have been used to study thealterations of globin gen... A newly developed method of RT-PCR/competitive PCR for measuring the relative and ab-solute content of globin mRNAs as well as micro-globin chain biosynthetic assay have been used to study thealterations of globin gene expressions in the patients with β-thalassemia pre-and post-hydroxyurea(HU)treatment.It was found for the first time that HU had the effect of enhancing β-globin gene expression insome patients.Two cases with β-thalassemia who were subjected to HU treatment for over two years showeda marked increase in β-globin mRNA level and β-globin chain synthesis,resulting in more effective erythro-poiesis and the alleviation of clinical symptoms. 展开更多
关键词 Β-THALASSEMIA globin GENE EXPRESSION HYDROXYUREA
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Developmental stage-specific factors in the mouse haematopoietic tissues binding to the 5'-flanking as-acting elements of humanε-globin gene 被引量:1
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作者 严志江 陈雅娣 钱若兰 《Chinese Science Bulletin》 SCIE EI CAS 1995年第9期778-783,共6页
The human ε-globin gene is expressed in a tissue-specific and developmental stage-specific manner. During the earliest stage of gestation, this gene is expressed in the yolksac, but is silenced completely at the 6th-... The human ε-globin gene is expressed in a tissue-specific and developmental stage-specific manner. During the earliest stage of gestation, this gene is expressed in the yolksac, but is silenced completely at the 6th-8th weeks of gestation. Recently, several studieson the transgenic mice have shown that the 5′-flanking DNA sequences of human 展开更多
关键词 HUMAN ε-globin gene cis-acting element trans-acting factor.
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Effects of point mutation C→T at - 64 of human δ globin gene promoter on DNA binding proteins
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作者 Haiping Kou Songsen Chen +3 位作者 Weidong Chen Jingqiu Zhang Xu Di Zhiquan Liang 《Chinese Science Bulletin》 SCIE EI CAS 1999年第17期1576-1581,共6页
By electrophoretic mobility shift assay (EMSA), the effect of point mutation C→T at - 64 of human δ-globin gene on its binding proteins has been studied. Two segments of 36 bp from - 83- - 48 bp of the 6 globin gene... By electrophoretic mobility shift assay (EMSA), the effect of point mutation C→T at - 64 of human δ-globin gene on its binding proteins has been studied. Two segments of 36 bp from - 83- - 48 bp of the 6 globin gene promoter, named WOG and MOG, were synthesized. WOG includes wild type CAAT-like box (CCAAC), while MOG includes the mutant CAAT-like box (CCAAT, -64 C→T). Results indicate that: ( i ) in erythroid cell lines MEL, K562 and Hemin induced K562, the affinity of MOG with CCAAT binding protein (CBF) and GATA-1 展开更多
关键词 δ globin gene PROMOTER BINDING PROTEINS electrophoretic mobility SHIFT assay.
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A novel erythroid differentiation related gene EDRF2 inhibited α-globin gene expression in K562 cells
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作者 WANG Duncheng, YANG Xiaoming & SHEN BeifenInstitute of Basic Medical Sciences, Institute of Radiation Medicine Sciences, Academy of Military Sciences, Beijing 100850, China 《Chinese Science Bulletin》 SCIE EI CAS 2002年第5期398-402,共5页
In previous studies, we found that EDRF2 was an erythroid differentiation related factor, whose expression was markedly upregulated during erythroid differentiation. It suggested that this factor played a role in eryt... In previous studies, we found that EDRF2 was an erythroid differentiation related factor, whose expression was markedly upregulated during erythroid differentiation. It suggested that this factor played a role in erythropoiesis. By using rapid amplification of cDNA ends technology, we cloned EDRF2 gene 5’-and 3’-cDNA ends successfully. Transfection and Northern blot analysis demonstrated that EDRF2 inhibited mRNA expression of a-globin gene, while did not regulate γ-globin gene expression. Gel shift assay confirmed that DNA-binding activity of erythroid specific transcription factors GATA-1, NF-E2 and AP1 was not affected by either forced overexpression or artificial down-regulation of EDRF2 gene in K562 cells. However, we detected that the negative regulator of expression of GATA-1 transcription factor was increased in EDRF2 overexpressed K562 cells. These results strongly suggested that EDRF2 was involved in a-globin gene expression and erythroid differentiation and served as a negative regulator of 展开更多
关键词 globin gene ERYTHROID specific TRANSCRIPTION factors LEUCINE ZIPPER RACE EMSA.
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Interactions between HMG proteins and the core sequence of DNaseI hypersensitive site 2 in the locus control region (LCR) of the human β-Mike globin gene cluster
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作者 赵晖 张树冰 +1 位作者 蒋俶 钱若兰 《Science China(Life Sciences)》 SCIE CAS 2000年第6期631-636,共6页
HMG proteins are abundant chromosomal non-histone proteins. It has been suggested that the HMG proteins may play an important role in the structure and function of chromatin. In the present study, the binding of HMG p... HMG proteins are abundant chromosomal non-histone proteins. It has been suggested that the HMG proteins may play an important role in the structure and function of chromatin. In the present study, the binding of HMG proteins (HMG1/2 and HMG14/17) to the core DNA sequence of DNasel hypersensitive site 2 (HS2core DNA sequence, -10681-10970 bp) in the locus control region (LCR) of the human β-like globin gene cluster has been examined by using both the in vitro nucleosome reconstitution and the gel mobility shift assays. Here we show that HMG1/2 can bind to the naked HS2core DNA sequence, however, HMG 14/17 cannot. Using the in vitro nucleosome reconstitution we demonstrate that HMG14/17 can bind to the HS2core DNA sequence which is assembled into nucleosomes with the core histone octamer transferred from chicken erythrocytes. In contrast, HMG 1/2 cannot bind to the nucleosomes reconstituted in vitro with the HS2core DNA sequence. These results indicate that the binding patterns between HMG proteins and the HS2core DNA sequence which exists in different states (the naked DNA or the in vitro reconstituted nucleosomal DNA) are quite different. We speculate that HMG proteins might play a critical role in the regulation of the human β-like globin gene's expression. 展开更多
关键词 HMG proteins HUMAN β-like globin gene CLUSTER DNASEI HYPERSENSITIVE SITE 2 (HS2) the in vitro nucleosome reconstitution.
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STUDIES ON POLYMORPHISM IN β-GLOBIN GENE CLUSTER IN CHINESE——THE POLYMORPHIC RESTRICTION ENDONUCLEASE HIND Ⅲ SITES WITHIN γ-GLOBIN GENE (Ⅲ)
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作者 方福德 吴冠芸 +1 位作者 沈岩 左瑾 《Chinese Science Bulletin》 SCIE EI CAS 1986年第1期62-65,共4页
The polymorphism of human globin genes as a genetic marker has been widely used in studies related to anthropology, genetics and prenatal diagnosis of genetic diseases (e.g. prenatal diagnosis of β-thalassemia and si... The polymorphism of human globin genes as a genetic marker has been widely used in studies related to anthropology, genetics and prenatal diagnosis of genetic diseases (e.g. prenatal diagnosis of β-thalassemia and sickle cell anemia). Since 1978, several polymorphic restriction endonuclease sites in the human in β-globin gene cluster 展开更多
关键词 globin ENDONUCLEASE anemia POLYMORPHIC globin GENE SITES WITHIN genetics DNA marker dextran
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