This study analyzed the mitochondrial DNA D-loop hypervariable region 601 bp sequence in 12 Eutamias sibiricus from Heilongjiang area. The result showed that the average contents of A, T, G and C were 33.2%, 30.5%, 11...This study analyzed the mitochondrial DNA D-loop hypervariable region 601 bp sequence in 12 Eutamias sibiricus from Heilongjiang area. The result showed that the average contents of A, T, G and C were 33.2%, 30.5%, 11.8% and 24.5% respectively, the A＋T content （63.7%） was obviously higher than the G＋C content （36.3%）. Thirty-six, mutation （approximately 6.0%） sites were found and 9 haplotypes were defined. The mutations types, including transition, transversion and deletion were all found in the detected mtDNA D-loop regions, most of which was transition. The average nucleotide mutational ratio was 1.22%. The nucleotide mutation sites affected the restriction site appearance or disappearance of the restriction site. The research on mtDNA D-loop is focused on the domestic animals and there is no report on Eutamias sibiricus, This study analyzed the mitochondrial DNA D-loop hypervariable in Eutamias sibiricus so as to provide some useful informations for related research in the future.展开更多
[Objective] To explore the polymorphism of the 3′ flank region of equine IGF-Ⅰ gene. [Method] The 3′ flank region sequences of IGF-Ⅰ gene were amplified from genomic DNA of 270 horses, which included 4 types of Mo...[Objective] To explore the polymorphism of the 3′ flank region of equine IGF-Ⅰ gene. [Method] The 3′ flank region sequences of IGF-Ⅰ gene were amplified from genomic DNA of 270 horses, which included 4 types of Mongolian horse, Sanhe horse and Thoroughbred, and then analyzed by PCR-SSCP. [Result] Three genotypes (AA, BB and AB) were detected by PCR-SSCP and the distribution of genotypes of all research objects except Xinihe horse and Baerhu horse were in line with the "Hardy-Weinberg Law". [Conclusion] There was a polymorphic locus in the 3′ flank region of IGF-Ⅰ gene, which might affect the equine growth and development mechanism. The study is of important theoretical and practical significance to improve the performance and to develop equine industry.展开更多
[Object] This study was conducted to explore the genetic diversity and structure of the wild Repomucenus curvicornis inhabiting Liaoning Coast, China. [Method] The mitochondrial COⅠ gene and control region（CR） were...[Object] This study was conducted to explore the genetic diversity and structure of the wild Repomucenus curvicornis inhabiting Liaoning Coast, China. [Method] The mitochondrial COⅠ gene and control region（CR） were PCR amplified from the wild R. curvicornis populations from the Liaodong Bay（n=22） and the northern Yellow Sea（n=18）, sequenced and analyzed for genetic diversity. [Result] The contents of A, T, C and G of 624 bp COⅠ gene were 24.09%, 31.04%, 25.28%, and 19.59%, and those of 460 bp CR fragment were 32.96%, 32.80%, 14.86% and 19.38%, respectively. The total number of variable sites, average number of nucleotide differences（ k）, haplotype diversity（H） and nucleotide diversity（π） based on COⅠ gene were 38, 4.67,（0.96±0.02） and（0.007 5±0.004 2）, and those based on CR fragment were 26, 3.35,（0.97 ±0.02） and（0.007 3±0.004 3）, respectively. Based on mitochondrial COⅠ gene and CR, the genetic diversity of Liaodong Bay population was lower than that of the northern Yellow Sea population. The AMOVA analysis based on CR fragments revealed almost significant genetic divergence between the Liaodong Bay and the northern Yellow Sea populations, while there was no significant genetic divergence based on COⅠ gene. The results showed that CR and COⅠ gene are effective molecular markers for detecting the genetic diversity of R. curvicornis population, while CR is more reliable than COⅠ gene in detecting the genetic structure. [Conclusion] CR is an appropriate marker for genetic analysis of marine fish population.展开更多
通过对我国沿海三疣梭子蟹（Portunus trituberculatus）9个野生群体线粒体DNA控制区（putative control region,CR）基因片段和细胞色素氧化酶亚基Ⅰ（COⅠ）基因片段进行扩增和测序,分别得到长度为530bp和584bp的片段。分析结果表明：...通过对我国沿海三疣梭子蟹（Portunus trituberculatus）9个野生群体线粒体DNA控制区（putative control region,CR）基因片段和细胞色素氧化酶亚基Ⅰ（COⅠ）基因片段进行扩增和测序,分别得到长度为530bp和584bp的片段。分析结果表明：CR83条序列A＋T平均含量为73.2%,共检测到91个变异位点,83个个体具有66种单倍型（haplotype） COⅠ94条序列A＋T平均含量为62.2%,共检测到34个变异位点,94个个体具有34种单倍型（haplotype）。用MEGA3.1软件构建9个群体NJ分子树,聚类结果显示,黄海、东海、渤海6个群体之间的相对遗传距离比较近,聚为一大支,南海3个群体相对遗传距离比较近,聚为一大支。AMOVA分析表明,群体间的遗传分化指数（Fst）为-0.07454-0.27087,其中部分群体间达到显著差异（P〈0.05）与极显著差异（P〈0.01）,说明我国三疣梭子蟹不同野生群体间存在一定遗传分化。展开更多
丙型肝炎病毒(hepatitis C virus,HCV)入侵宿主细胞是由多种受体分子介导的多步骤过程,其中B族Ⅰ型清道夫受体(SR-BⅠ/SCARB1)被认为是最先与HCV作用的受体。SR-BⅠ能够与HCV包膜糖蛋白E2相结合,在此过程中位于E2蛋白氨基末端的高变区1(...丙型肝炎病毒(hepatitis C virus,HCV)入侵宿主细胞是由多种受体分子介导的多步骤过程,其中B族Ⅰ型清道夫受体(SR-BⅠ/SCARB1)被认为是最先与HCV作用的受体。SR-BⅠ能够与HCV包膜糖蛋白E2相结合,在此过程中位于E2蛋白氨基末端的高变区1(hypervariable region 1,HVR1)起关键作用。SR-BⅠ与HCV的相互作用不仅能够介导HCV的细胞入侵,还能降低抗体对HCV的中和作用,有助于HCV的免疫逃避。因此,深入研究SR-BⅠ在HCV入侵细胞过程中的作用机制,有望发现在HCV感染的初始环节能够高效地阻断HCV入侵细胞的靶分子,从而预防和治疗HCV的感染。本文就SR-BⅠ的生物学特性、SR-BⅠ与HCV的相互作用对病毒入侵细胞的影响及机制等方面的最新进展作一综述。展开更多
文摘This study analyzed the mitochondrial DNA D-loop hypervariable region 601 bp sequence in 12 Eutamias sibiricus from Heilongjiang area. The result showed that the average contents of A, T, G and C were 33.2%, 30.5%, 11.8% and 24.5% respectively, the A＋T content （63.7%） was obviously higher than the G＋C content （36.3%）. Thirty-six, mutation （approximately 6.0%） sites were found and 9 haplotypes were defined. The mutations types, including transition, transversion and deletion were all found in the detected mtDNA D-loop regions, most of which was transition. The average nucleotide mutational ratio was 1.22%. The nucleotide mutation sites affected the restriction site appearance or disappearance of the restriction site. The research on mtDNA D-loop is focused on the domestic animals and there is no report on Eutamias sibiricus, This study analyzed the mitochondrial DNA D-loop hypervariable in Eutamias sibiricus so as to provide some useful informations for related research in the future.
文摘[Objective] To explore the polymorphism of the 3′ flank region of equine IGF-Ⅰ gene. [Method] The 3′ flank region sequences of IGF-Ⅰ gene were amplified from genomic DNA of 270 horses, which included 4 types of Mongolian horse, Sanhe horse and Thoroughbred, and then analyzed by PCR-SSCP. [Result] Three genotypes (AA, BB and AB) were detected by PCR-SSCP and the distribution of genotypes of all research objects except Xinihe horse and Baerhu horse were in line with the "Hardy-Weinberg Law". [Conclusion] There was a polymorphic locus in the 3′ flank region of IGF-Ⅰ gene, which might affect the equine growth and development mechanism. The study is of important theoretical and practical significance to improve the performance and to develop equine industry.
基金Supported by the National Key R&D Program of China(2017YFC1404400)The National Natural Science Foundation of China(31770458)
文摘[Object] This study was conducted to explore the genetic diversity and structure of the wild Repomucenus curvicornis inhabiting Liaoning Coast, China. [Method] The mitochondrial COⅠ gene and control region（CR） were PCR amplified from the wild R. curvicornis populations from the Liaodong Bay（n=22） and the northern Yellow Sea（n=18）, sequenced and analyzed for genetic diversity. [Result] The contents of A, T, C and G of 624 bp COⅠ gene were 24.09%, 31.04%, 25.28%, and 19.59%, and those of 460 bp CR fragment were 32.96%, 32.80%, 14.86% and 19.38%, respectively. The total number of variable sites, average number of nucleotide differences（ k）, haplotype diversity（H） and nucleotide diversity（π） based on COⅠ gene were 38, 4.67,（0.96±0.02） and（0.007 5±0.004 2）, and those based on CR fragment were 26, 3.35,（0.97 ±0.02） and（0.007 3±0.004 3）, respectively. Based on mitochondrial COⅠ gene and CR, the genetic diversity of Liaodong Bay population was lower than that of the northern Yellow Sea population. The AMOVA analysis based on CR fragments revealed almost significant genetic divergence between the Liaodong Bay and the northern Yellow Sea populations, while there was no significant genetic divergence based on COⅠ gene. The results showed that CR and COⅠ gene are effective molecular markers for detecting the genetic diversity of R. curvicornis population, while CR is more reliable than COⅠ gene in detecting the genetic structure. [Conclusion] CR is an appropriate marker for genetic analysis of marine fish population.
文摘通过对我国沿海三疣梭子蟹（Portunus trituberculatus）9个野生群体线粒体DNA控制区（putative control region,CR）基因片段和细胞色素氧化酶亚基Ⅰ（COⅠ）基因片段进行扩增和测序,分别得到长度为530bp和584bp的片段。分析结果表明：CR83条序列A＋T平均含量为73.2%,共检测到91个变异位点,83个个体具有66种单倍型（haplotype） COⅠ94条序列A＋T平均含量为62.2%,共检测到34个变异位点,94个个体具有34种单倍型（haplotype）。用MEGA3.1软件构建9个群体NJ分子树,聚类结果显示,黄海、东海、渤海6个群体之间的相对遗传距离比较近,聚为一大支,南海3个群体相对遗传距离比较近,聚为一大支。AMOVA分析表明,群体间的遗传分化指数（Fst）为-0.07454-0.27087,其中部分群体间达到显著差异（P〈0.05）与极显著差异（P〈0.01）,说明我国三疣梭子蟹不同野生群体间存在一定遗传分化。
文摘丙型肝炎病毒(hepatitis C virus,HCV)入侵宿主细胞是由多种受体分子介导的多步骤过程,其中B族Ⅰ型清道夫受体(SR-BⅠ/SCARB1)被认为是最先与HCV作用的受体。SR-BⅠ能够与HCV包膜糖蛋白E2相结合,在此过程中位于E2蛋白氨基末端的高变区1(hypervariable region 1,HVR1)起关键作用。SR-BⅠ与HCV的相互作用不仅能够介导HCV的细胞入侵,还能降低抗体对HCV的中和作用,有助于HCV的免疫逃避。因此,深入研究SR-BⅠ在HCV入侵细胞过程中的作用机制,有望发现在HCV感染的初始环节能够高效地阻断HCV入侵细胞的靶分子,从而预防和治疗HCV的感染。本文就SR-BⅠ的生物学特性、SR-BⅠ与HCV的相互作用对病毒入侵细胞的影响及机制等方面的最新进展作一综述。
