As one of the essential topics in proteomics and molecular biology, protein subcellular localization has been extensively studied in previous decades. However, most of the methods are limited to the prediction of sing...As one of the essential topics in proteomics and molecular biology, protein subcellular localization has been extensively studied in previous decades. However, most of the methods are limited to the prediction of single-location proteins. In many studies, multi-location proteins are either not considered or assumed not existing. This paper proposes a novel multi-label subcellular-localization predictor based on the semantic similarity between Gene Ontology (GO) terms. Given a protein, the accession numbers of its homologs are obtained via BLAST search. Then, the homologous accession numbers of the protein are used as keys to search against the gene ontology annotation database to obtain a set of GO terms. The semantic similarity between GO terms is used to formulate semantic similarity vectors for classification. A support vector machine (SVM) classifier with a new decision scheme is proposed to classify the multi-label GO semantic similarity vectors. Experimental results show that the proposed multi-label predictor significantly outperforms the state-of-the-art predictors such as iLoc-Plant and Plant-mPLoc.展开更多
为解决现有粒子群改进策略无法帮助已陷入局部最优和过早收敛的粒子恢复寻优性能的问题,提出一种陷阱标记联合懒蚂蚁的自适应粒子群优化(adaptive particle swarm optimization based on trap label and lazy ant, TLLA-APSO)算法。陷...为解决现有粒子群改进策略无法帮助已陷入局部最优和过早收敛的粒子恢复寻优性能的问题,提出一种陷阱标记联合懒蚂蚁的自适应粒子群优化(adaptive particle swarm optimization based on trap label and lazy ant, TLLA-APSO)算法。陷阱标记策略为粒子群提供动态速度增量,使其摆脱最优解的束缚。利用懒蚂蚁寻优策略多样化粒子速度,提升种群多样性。通过惯性认知策略在速度更新中引入历史位置,增加粒子的路径多样性和提升粒子的探索性能,使粒子更有效地避免陷入新的局部最优。理论证明了引入历史位置的粒子群算法的收敛性。仿真实验结果表明,所提算法不仅能有效解决粒子群已陷入局部最优和过早收敛的问题,且与其他算法相比,具有较快的收敛速度和较高的寻优精度。展开更多
Existing unsupervised person re-identification approaches fail to fully capture thefine-grained features of local regions,which can result in people with similar appearances and different identities being assigned the...Existing unsupervised person re-identification approaches fail to fully capture thefine-grained features of local regions,which can result in people with similar appearances and different identities being assigned the same label after clustering.The identity-independent information contained in different local regions leads to different levels of local noise.To address these challenges,joint training with local soft attention and dual cross-neighbor label smoothing(DCLS)is proposed in this study.First,the joint training is divided into global and local parts,whereby a soft attention mechanism is proposed for the local branch to accurately capture the subtle differences in local regions,which improves the ability of the re-identification model in identifying a person’s local significant features.Second,DCLS is designed to progressively mitigate label noise in different local regions.The DCLS uses global and local similarity metrics to semantically align the global and local regions of the person and further determines the proximity association between local regions through the cross information of neighboring regions,thereby achieving label smoothing of the global and local regions throughout the training process.In extensive experiments,the proposed method outperformed existing methods under unsupervised settings on several standard person re-identification datasets.展开更多
In recent years,multi-label learning has received a lot of attention.However,most of the existing methods only consider global label correlation or local label correlation.In fact,on the one hand,both global and local...In recent years,multi-label learning has received a lot of attention.However,most of the existing methods only consider global label correlation or local label correlation.In fact,on the one hand,both global and local label correlations can appear in real-world situation at same time.On the other hand,we should not be limited to pairwise labels while ignoring the high-order label correlation.In this paper,we propose a novel and effective method called GLLCBN for multi-label learning.Firstly,we obtain the global label correlation by exploiting label semantic similarity.Then,we analyze the pairwise labels in the label space of the data set to acquire the local correlation.Next,we build the original version of the label dependency model by global and local label correlations.After that,we use graph theory,probability theory and Bayesian networks to eliminate redundant dependency structure in the initial version model,so as to get the optimal label dependent model.Finally,we obtain the feature extraction model by adjusting the Inception V3 model of convolution neural network and combine it with the GLLCBN model to achieve the multi-label learning.The experimental results show that our proposed model has better performance than other multi-label learning methods in performance evaluating.展开更多
A novel multi-view 3D face registration method based on principal axis analysis and labeled regions orientation called local orientation registration is proposed.The pre-registration is achieved by transforming the mu...A novel multi-view 3D face registration method based on principal axis analysis and labeled regions orientation called local orientation registration is proposed.The pre-registration is achieved by transforming the multi-pose models to the standard frontal model＇s reference frame using the principal axis analysis algorithm.Some significant feature regions, such as inner and outer canthus, nose tip vertices, are then located by using geometrical distribution characteristics.These regions are subsequently employed to compute the conversion parameters using the improved iterative closest point algorithm, and the optimal parameters are applied to complete the final registration.Experimental results implemented on the proper database demonstrate that the proposed method significantly outperforms others by achieving 1.249 and 1.910 mean root-mean-square measure with slight and large view variation models, respectively.展开更多
针对标签传播算法中节点启动顺序和更新标签的随机性造成的结果不稳定问题,提出一种新标签传播算法用于复杂网络社区检测(density peaks and node similarity,DPNS-LPA),包括社区中心的确定和外围节点的标签传播。首先利用大度节点不利...针对标签传播算法中节点启动顺序和更新标签的随机性造成的结果不稳定问题,提出一种新标签传播算法用于复杂网络社区检测(density peaks and node similarity,DPNS-LPA),包括社区中心的确定和外围节点的标签传播。首先利用大度节点不利指标、Jaccard指标和度为1节点的结构特性刻画节点局部相似性指标,并用此指标度量节点间距离和解决最大标签相同时的随机选择;然后引入改进的密度峰值聚类算法寻找社区中心,确定社区数量;最后基于社区中心和外围节点的标签传播,得到最终的社区划分结果。通过人工网络和真实网络上的实验,结果表明标准化互信息、模块度和D-score指标值优于对比算法,所提出的算法可以有效发现复杂网络中的社区结构,且鲁棒性更高。展开更多
文摘As one of the essential topics in proteomics and molecular biology, protein subcellular localization has been extensively studied in previous decades. However, most of the methods are limited to the prediction of single-location proteins. In many studies, multi-location proteins are either not considered or assumed not existing. This paper proposes a novel multi-label subcellular-localization predictor based on the semantic similarity between Gene Ontology (GO) terms. Given a protein, the accession numbers of its homologs are obtained via BLAST search. Then, the homologous accession numbers of the protein are used as keys to search against the gene ontology annotation database to obtain a set of GO terms. The semantic similarity between GO terms is used to formulate semantic similarity vectors for classification. A support vector machine (SVM) classifier with a new decision scheme is proposed to classify the multi-label GO semantic similarity vectors. Experimental results show that the proposed multi-label predictor significantly outperforms the state-of-the-art predictors such as iLoc-Plant and Plant-mPLoc.
文摘为解决现有粒子群改进策略无法帮助已陷入局部最优和过早收敛的粒子恢复寻优性能的问题,提出一种陷阱标记联合懒蚂蚁的自适应粒子群优化(adaptive particle swarm optimization based on trap label and lazy ant, TLLA-APSO)算法。陷阱标记策略为粒子群提供动态速度增量,使其摆脱最优解的束缚。利用懒蚂蚁寻优策略多样化粒子速度,提升种群多样性。通过惯性认知策略在速度更新中引入历史位置,增加粒子的路径多样性和提升粒子的探索性能,使粒子更有效地避免陷入新的局部最优。理论证明了引入历史位置的粒子群算法的收敛性。仿真实验结果表明,所提算法不仅能有效解决粒子群已陷入局部最优和过早收敛的问题,且与其他算法相比,具有较快的收敛速度和较高的寻优精度。
基金supported by the National Natural Science Foundation of China under Grant Nos.62076117 and 62166026the Jiangxi Key Laboratory of Smart City under Grant No.20192BCD40002Jiangxi Provincial Natural Science Foundation under Grant No.20224BAB212011.
文摘Existing unsupervised person re-identification approaches fail to fully capture thefine-grained features of local regions,which can result in people with similar appearances and different identities being assigned the same label after clustering.The identity-independent information contained in different local regions leads to different levels of local noise.To address these challenges,joint training with local soft attention and dual cross-neighbor label smoothing(DCLS)is proposed in this study.First,the joint training is divided into global and local parts,whereby a soft attention mechanism is proposed for the local branch to accurately capture the subtle differences in local regions,which improves the ability of the re-identification model in identifying a person’s local significant features.Second,DCLS is designed to progressively mitigate label noise in different local regions.The DCLS uses global and local similarity metrics to semantically align the global and local regions of the person and further determines the proximity association between local regions through the cross information of neighboring regions,thereby achieving label smoothing of the global and local regions throughout the training process.In extensive experiments,the proposed method outperformed existing methods under unsupervised settings on several standard person re-identification datasets.
文摘In recent years,multi-label learning has received a lot of attention.However,most of the existing methods only consider global label correlation or local label correlation.In fact,on the one hand,both global and local label correlations can appear in real-world situation at same time.On the other hand,we should not be limited to pairwise labels while ignoring the high-order label correlation.In this paper,we propose a novel and effective method called GLLCBN for multi-label learning.Firstly,we obtain the global label correlation by exploiting label semantic similarity.Then,we analyze the pairwise labels in the label space of the data set to acquire the local correlation.Next,we build the original version of the label dependency model by global and local label correlations.After that,we use graph theory,probability theory and Bayesian networks to eliminate redundant dependency structure in the initial version model,so as to get the optimal label dependent model.Finally,we obtain the feature extraction model by adjusting the Inception V3 model of convolution neural network and combine it with the GLLCBN model to achieve the multi-label learning.The experimental results show that our proposed model has better performance than other multi-label learning methods in performance evaluating.
基金supported by the New Century Excellent Talents of China (NCET-05-0866)
文摘A novel multi-view 3D face registration method based on principal axis analysis and labeled regions orientation called local orientation registration is proposed.The pre-registration is achieved by transforming the multi-pose models to the standard frontal model＇s reference frame using the principal axis analysis algorithm.Some significant feature regions, such as inner and outer canthus, nose tip vertices, are then located by using geometrical distribution characteristics.These regions are subsequently employed to compute the conversion parameters using the improved iterative closest point algorithm, and the optimal parameters are applied to complete the final registration.Experimental results implemented on the proper database demonstrate that the proposed method significantly outperforms others by achieving 1.249 and 1.910 mean root-mean-square measure with slight and large view variation models, respectively.
文摘针对标签传播算法中节点启动顺序和更新标签的随机性造成的结果不稳定问题,提出一种新标签传播算法用于复杂网络社区检测(density peaks and node similarity,DPNS-LPA),包括社区中心的确定和外围节点的标签传播。首先利用大度节点不利指标、Jaccard指标和度为1节点的结构特性刻画节点局部相似性指标,并用此指标度量节点间距离和解决最大标签相同时的随机选择;然后引入改进的密度峰值聚类算法寻找社区中心,确定社区数量;最后基于社区中心和外围节点的标签传播,得到最终的社区划分结果。通过人工网络和真实网络上的实验,结果表明标准化互信息、模块度和D-score指标值优于对比算法,所提出的算法可以有效发现复杂网络中的社区结构,且鲁棒性更高。
