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DNA damage response-related immune activation signature predicts the response to immune checkpoint inhibitors: from gastrointestinal cancer analysis to pan-cancer validation
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作者 Junya Yan Shibo Wang +20 位作者 Jing Zhang Qiangqiang Yuan Xianchun Gao Nannan Zhang Yan Pan Haohao Zhang Kun Liu Jun Yu Linbin Lu Hui Liu Xiaoliang Gao Sheng Zhao Wenyao Zhang Abudurousuli Reyila Yu Qi Qiujin Zhang Shundong Cang Yuanyuan Lu Yanglin Pan Yan Kong Yongzhan Nie 《Cancer Biology & Medicine》 SCIE CAS CSCD 2024年第3期252-266,共15页
Objective: DNA damage response(DDR) deficiency has emerged as a prominent determinant of tumor immunogenicity. This study aimed to construct a DDR-related immune activation(DRIA) signature and evaluate the predictive ... Objective: DNA damage response(DDR) deficiency has emerged as a prominent determinant of tumor immunogenicity. This study aimed to construct a DDR-related immune activation(DRIA) signature and evaluate the predictive accuracy of the DRIA signature for response to immune checkpoint inhibitor(ICI) therapy in gastrointestinal(GI) cancer.Methods: A DRIA signature was established based on two previously reported DNA damage immune response assays. Clinical and gene expression data from two published GI cancer cohorts were used to assess and validate the association between the DRIA score and response to ICI therapy. The predictive accuracy of the DRIA score was validated based on one ICI-treated melanoma and three pan-cancer published cohorts.Results: The DRIA signature includes three genes(CXCL10, IDO1, and IFI44L). In the discovery cancer cohort, DRIA-high patients with gastric cancer achieved a higher response rate to ICI therapy than DRIA-low patients(81.8% vs. 8.8%;P < 0.001), and the predictive accuracy of the DRIA score [area under the receiver operating characteristic curve(AUC) = 0.845] was superior to the predictive accuracy of PD-L1 expression, tumor mutational burden, microsatellite instability, and Epstein–Barr virus status. The validation cohort demonstrated that the DRIA score identified responders with microsatellite-stable colorectal and pancreatic adenocarcinoma who received dual PD-1 and CTLA-4 blockade with radiation therapy. Furthermore, the predictive performance of the DRIA score was shown to be robust through an extended validation in melanoma, urothelial cancer, and pan-cancer.Conclusions: The DRIA signature has superior and robust predictive accuracy for the efficacy of ICI therapy in GI cancer and pancancer, indicating that the DRIA signature may serve as a powerful biomarker for guiding ICI therapy decisions. 展开更多
关键词 dna damage response-related immune activation immune checkpoint inhibitors biomarker gastrointestinal cancer pan-cancer
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DNA损伤修复相关通路的合成致死靶点研究及其在卵巢癌中的应用和前景
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作者 程洪艳 栾文庆 昌晓红 《中国生物化学与分子生物学报》 CAS CSCD 北大核心 2024年第6期740-748,共9页
DNA损伤引发细胞启动一系列DNA损伤应答(DNA damage response,DDR),包括DNA损伤修复、细胞周期检查点激活、细胞周期阻滞、各种细胞内信号转导途径的活化和细胞凋亡等。DNA损伤修复(DNA damage repair)是细胞维持基因组稳定性的重要机制... DNA损伤引发细胞启动一系列DNA损伤应答(DNA damage response,DDR),包括DNA损伤修复、细胞周期检查点激活、细胞周期阻滞、各种细胞内信号转导途径的活化和细胞凋亡等。DNA损伤修复(DNA damage repair)是细胞维持基因组稳定性的重要机制,于2015年获得诺贝尔化学奖。DNA损伤修复途径主要包括:碱基切除修复(base-excision repair,BER)、核苷酸切除修复(nucleotide excision repair,NER)、错配修复(mismatch repair,MMR)、同源重组(homologous recombination,HR)和非同源末端连接(non-homologous end joining,NHEJ)等,分别在DNA单链断裂(single-strand break,SSB)或双链断裂(double-strand break,DSB)等损伤修复中发挥重要作用。DNA损伤修复缺陷与肿瘤发生发展密切相关,同时也是肿瘤治疗的重要靶点。DNA损伤修复通路的多聚ADP核糖聚合酶(poly-ADP-ribose polymerase,PARP)与乳腺癌易感基因BRCA 1/2等存在合成致死(synthetic lethality)作用,使PARP抑制剂(PARP inhibitor,PARPi)成为第一个也是目前唯一上市的肿瘤治疗合成致死靶药。PARPi在卵巢癌及多种实体瘤治疗中疗效良好,使DNA损伤修复及相关DDR通路的合成致死靶药研发成为热点,其他在研靶点主要包括:共济失调毛细血管扩张突变蛋白(ataxia telangiectasia-mutated protein,ATM)、共济失调毛细血管扩张与RAD3相关蛋白(ataxia telangiectasia and Rad3 related protein,ATR)、DNA依赖性蛋白质激酶催化亚单位(DNA-dependent protein kinase catalytic subunit,DNA-PKcs)、细胞周期检测点激酶1(checkpoint kinase1,CHK1)、细胞周期检测点激酶2(checkpoint kinase 2,CHK2)、阻止有丝分裂的蛋白质激酶WEE1等。PARPi与其他DDR靶药、抗血管生成药物及免疫检查点抑制剂的联用,有可能成为克服PARPi耐药、提高疗效的有效手段和发展前景。本文针对DNA损伤修复及相关DDR通路的关键分子和潜在肿瘤治疗靶点进行综述,阐述了DNA损伤修复相关通路的合成致死靶点研究及在卵巢癌的应用和前景,为基础研究及临床应用提供指导。 展开更多
关键词 卵巢癌 dna损伤应答 dna损伤修复 PARP抑制剂 合成致死 靶向治疗
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Inhibitor of DNA binding 2 accelerates nerve regeneration after sciatic nerve injury in mice 被引量:2
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作者 Zhong-Hai Huang Ai-Ying Feng +3 位作者 Jing Liu Libing Zhou Bing Zhou Panpan Yu 《Neural Regeneration Research》 SCIE CAS CSCD 2021年第12期2542-2548,共7页
Inhibitor of DNA binding 2(Id2)can promote axonal regeneration after injury of the central nervous system.However,whether Id2 can promote axonal regeneration and functional recovery after peripheral nerve injury is cu... Inhibitor of DNA binding 2(Id2)can promote axonal regeneration after injury of the central nervous system.However,whether Id2 can promote axonal regeneration and functional recovery after peripheral nerve injury is currently unknown.In this study,we established a mouse model of bilateral sciatic nerve crush injury.Two weeks before injury,AAV9-Id2-3×Flag-GFP was injected stereotaxically into the bilateral ventral horn of lumbar spinal cord.Our results showed that Id2 was successfully delivered into spinal cord motor neurons projecting to the sciatic nerve,and the number of regenerated motor axons in the sciatic nerve distal to the crush site was increased at 2 weeks after injury,arriving at the tibial nerve and reinnervating a few endplates in the gastrocnemius muscle.By 1 month after injury,extensive neuromuscular reinnervation occurred.In addition,the amplitude of compound muscle action potentials of the gastrocnemius muscle was markedly recovered,and their latency was shortened.These findings suggest that Id2 can accelerate axonal regeneration,promote neuromuscular reinnervation,and enhance functional improvement following sciatic nerve injury.Therefore,elevating the level of Id2 in adult neurons may present a promising strategy for peripheral nerve repair following injury.The study was approved by the Experimental Animal Ethics Committee of Jinan University(approval No.20160302003)on March 2,2016. 展开更多
关键词 axonal regeneration functional recovery inhibitor of dna binding 2 motor neuron neuromuscular junctions peripheral nerve REINNERVATION sciatic nerve injury
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Molecular insights into clinical trials for immune checkpoint inhibitors in colorectal cancer:Unravelling challenges and future directions 被引量:2
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作者 Samantha Sharma Naresh Singh +5 位作者 Anita Ahmed Turk Isabella Wan Akshay Guttikonda Julia Lily Dong Xinna Zhang Mateusz Opyrchal 《World Journal of Gastroenterology》 SCIE CAS 2024年第13期1815-1835,共21页
Colorectal cancer(CRC)is a complex disease with diverse etiologies and clinical outcomes.Despite considerable progress in development of CRC therapeutics,challenges remain regarding the diagnosis and management of adv... Colorectal cancer(CRC)is a complex disease with diverse etiologies and clinical outcomes.Despite considerable progress in development of CRC therapeutics,challenges remain regarding the diagnosis and management of advanced stage metastatic CRC(mCRC).In particular,the five-year survival rate is very low since mCRC is currently rarely curable.Over the past decade,cancer treatment has significantly improved with the introduction of cancer immunotherapies,specifically immune checkpoint inhibitors.Therapies aimed at blocking immune checkpoints such as PD-1,PD-L1,and CTLA-4 target inhibitory pathways of the immune system,and thereby enhance anti-tumor immunity.These therapies thus have shown promising results in many clinical trials alone or in combination.The efficacy and safety of immunotherapy,either alone or in combination with CRC,have been investigated in several clinical trials.Clinical trials,including KEYNOTE-164 and CheckMate 142,have led to Food and Drug Administration approval of the PD-1 inhibitors pembrolizumab and nivolumab,respectively,for the treatment of patients with unresectable or metastatic microsatellite instability-high or deficient mismatch repair CRC.Unfortunately,these drugs benefit only a small percentage of patients,with the benefits of immunotherapy remaining elusive for the vast majority of CRC patients.To this end,primary and secondary resistance to immunotherapy remains a significant issue,and further research is necessary to optimize the use of immunotherapy in CRC and identify biomarkers to predict the response.This review provides a comprehensive overview of the clinical trials involving immune checkpoint inhibitors in CRC.The underlying rationale,challenges faced,and potential future steps to improve the prognosis and enhance the likelihood of successful trials in this field are discussed. 展开更多
关键词 Colorectal cancer Immune checkpoint inhibitors Clinical trials Immunotherapy Microsatellite instability Microsatellite stability dna mismatch repair
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Hypersensitive Inhibition of the Proliferation of Cells with Mutated DNA Repair-Related Genes by the Catalytic Topoisomerase II Inhibitor 20-O-IngenolEZ
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作者 Masahiro Kanbe Yasuaki Fukuda +3 位作者 Manami Watanabe Keiichi Matsuzaki Susumu Kitanaka Shohei Miyata 《Pharmacology & Pharmacy》 2012年第2期158-165,共8页
We previously reported that many ingenol compounds derived from Euphoria kansui exhibit topoisomerase inhibitory activity. 20-O-ingenolEZ in these compounds exerted inhibitory effects on both topoisomerase II (topo II... We previously reported that many ingenol compounds derived from Euphoria kansui exhibit topoisomerase inhibitory activity. 20-O-ingenolEZ in these compounds exerted inhibitory effects on both topoisomerase II (topo II) activity and cell proliferative activity. Topoisomerase II inhibitors can be divided into the poison and catalytic inhibitor types and 20-O-ingenolEZ is a catalytic inhibitor and inhibits topo IIα through inhibition of ATPase activity, but induces topo II-mediated DNA damage and apoptosis in BLM-/- DT40 cells through the induction of the DNA damage checkpoint, similar to the poison type inhibitor adriamycin. The ATPase inhibitor of topo II ICRF-193 also showed poison-like characteristics in the same cell line. However, the inhibitory effects of ICRF-193 on the proliferation of BLM-/- DT40 cells differed from those of 20-O-ingenolEZ, as did the specificity of its inhibition of the proliferation of other cell lines. 20-O-ingenolEZ showed hypersensitive inhibition of the proliferation of MCF-7 cells and BLM-/- DT40 cells with mutated DNA repair-related genes. 展开更多
关键词 CATALYTIC TOPO II inhibitor dna Damage CHECKPOINT dna Repair-Related GENES Ingenol Compound
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Synergy of DNA methylation and histone deacetylase inhibitors in the re-expression of RASSF1A and P16 genes silenced in QBC cells
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作者 Hong Li Shaoqin Chen Yi Shu Yongjun Chen, Ying Su Xin Wang Shengquan Zou 《The Chinese-German Journal of Clinical Oncology》 CAS 2008年第11期627-630,共4页
Objective: To investigate the effects of DNA methylation and histone deacetylase inhibitors in the re-expression of P16 and RASSIF1A of QBC939. Methods: The QBC939 cells were treated with hydralazine and valproate eit... Objective: To investigate the effects of DNA methylation and histone deacetylase inhibitors in the re-expression of P16 and RASSIF1A of QBC939. Methods: The QBC939 cells were treated with hydralazine and valproate either alone or combined, and the control group was added with RPIM-1640 culture medium. After 48 h, the expression of P16 and RASSF1A genes were evaluated by reverse transcription-PCR, Western blot, and the methylation status of the two genes were detected with MSP (methylation specific PCR). Results: Hydralazine and valproate could induce demethylation of the promoter region of the two genes, and could make them re-active. The expressions of P16 and RASSF1A of cells treated with both drugs were higher than that of the cells treated with either hydralazine or valproate (P < 0.01). There was no RASSF1A gene, and few P16 gene expressing in the control group. The demethylation effect could be found in the groups treated with hydralazine or both drugs, whereas no demethylation effect happened in the valproate group. Conclusion: The two drugs could synergistically re-express P16 and RASSF1A genes silenced in QBC939, and they exerted a great anti-tumour effect on QBC cells. 展开更多
关键词 dna methyltransferase inhibitor histone deacetylase inhibitor dna hypermethylation gene re-expression
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外周血循环肿瘤DNA预测晚期非小细胞肺癌免疫治疗疗效及预后价值
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作者 袁胜芳 王布 +3 位作者 项保利 赵建清 沈晶晶 张志华 《实用医学杂志》 CAS 北大核心 2024年第15期2110-2115,共6页
目的探讨外周血循环肿瘤DNA预测晚期非小细胞肺癌(NSCLC)免疫治疗疗效及预后的价值。方法对2021年1-12月收治于河北北方学院附属第一医院呼吸与危重症医学科住院的78例晚期驱动基因阴性使用替雷利珠单抗治疗的NSCLC患者进行前瞻性研究,... 目的探讨外周血循环肿瘤DNA预测晚期非小细胞肺癌(NSCLC)免疫治疗疗效及预后的价值。方法对2021年1-12月收治于河北北方学院附属第一医院呼吸与危重症医学科住院的78例晚期驱动基因阴性使用替雷利珠单抗治疗的NSCLC患者进行前瞻性研究,免疫治疗2周期后按照实体瘤疗效评价标准(RECIST1.1)评价疗效,包括完全缓解(CR)、部分缓解(PR)、疾病稳定及疾病进展,将CR和PR患者定义为观察组(n=48),其他患者被定义为对照组(n=30),测定两组患者治疗前后外周血中ctDNA水平,采用ROC曲线分析外周血ctDNA水平对于免疫治疗后达客观缓解的预测价值。对所有患者进行随访,统计其无进展生存期,采用单因素及多因素回归分析免疫治疗后患者预后的影响因素,采用Spearman相关系数对ctDNA水平与PFS进行相关性分析,采用Kalplan-Meier生存曲线进行生存分析。结果观察组治疗前后外周血ctDNA水平分别为(4.47±1.21)、(2.65±1.14)ng/μL(t=7.559,P<0.001),对照组治疗前后外周血ctDNA水平为(4.54±1.15)、(4.29±1.57)ng/μL(t=0.699,P=0.487),两组患者在治疗前外周血ctDNA水平差异无统计学意义(t=-0.25,P=0.801),观察组治疗后外周血ctDNA水平较对照组下降(t=-5.35,P<0.001)。ROC曲线分析外周血ctDNA水平预测免疫治疗后达客观缓解的曲线下面积为0.819,预测的敏感性度81.3%,特异度为80%,外周血ctDNA水平与患者无进展生存期(PFS)呈负相关(r=-0.784,P<0.001),采用单因素Cox回归对入组患者的临床病理特征及ctDNA水平进行分析,结果显示肿瘤最大径>5 cm(HR=0.501,95%CI:0.282~0.890)、肿瘤Ⅳ期(HR=0.392,95%CI:0.227~0.677)、治疗方式(HR=15.473,95%CI:6.731~35.567)及ctDNA水平(HR=4.567,95%CI:3.182~6.555)均为晚期NSCLC患者免疫治疗后PFS的影响因素,再将有统计学差异的上述指标进行多因素分析,结果显示:治疗方式(HR=2.981,95%CI:1.019~8.722)及外周血ctDNA水平(HR=3.918,95%CI:2.619~5.861)是晚期NSCLC患者PFS的独立影响因素,采用Kalplan-Meier生存曲线进行分析,结果显示观察组的中位PFS为8.4个月,对照组的中位PFS为5.4个月,差异有统计学意义(χ^(2)=46.828,P=0.000)。结论免疫联合化疗可增强杀伤肿瘤细胞的能力,外周血ctDNA水平可评估免疫治疗的疗效及预后,可用于指导晚期NSCLC患者的免疫治疗。 展开更多
关键词 循环肿瘤dna 非小细胞肺癌 免疫检查点抑制剂 疗效分析 预后
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Targeting DNA repair for cancer treatment: Lessons from PARP inhibitor trials
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作者 DHANYA K.NAMBIAR DEEPALI MISHRA RANA P.SINGH 《Oncology Research》 SCIE 2023年第4期405-421,共17页
Ionizing radiation is frequently used to treat solid tumors,as it causes DNA damage and kill cancer cells.However,damaged DNA is repaired involving poly-(ADP-ribose)polymerase-1(PARP-1)causing resistance to radiation ... Ionizing radiation is frequently used to treat solid tumors,as it causes DNA damage and kill cancer cells.However,damaged DNA is repaired involving poly-(ADP-ribose)polymerase-1(PARP-1)causing resistance to radiation therapy.Thus,PARP-1 represents an important target in multiple cancer types,including prostate cancer.PARP is a nuclear enzyme essential for single-strand DNA breaks repair.Inhibiting PARP-1 is lethal in a wide range of cancer cells that lack the homologous recombination repair(HR)pathway.This article provides a concise and simplified overview of the development of PARP inhibitors in the laboratory and their clinical applications.We focused on the use of PARP inhibitors in various cancers,including prostate cancer.We also discussed some of the underlying principles and challenges that may affect the clinical efficacy of PARP inhibitors. 展开更多
关键词 PARP inhibitors Synthetic lethality dna repair BRCA mutations
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七种蛋白酶抑制剂对多房棘球蚴DNA损伤诱导样1蛋白活性的影响
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作者 张生英 刘仲藜 +1 位作者 郭爱疆 王帅 《畜牧兽医学报》 CAS CSCD 北大核心 2024年第5期2273-2280,共8页
目前,多房棘球蚴病(alveolar echinococcosis, AE)尚无有效药物治疗手段,迫切需要开发新型治疗药物。前期研究表明,HIV蛋白酶抑制剂(HIV protease inhibitors, HIV PIs)具有潜在抗寄生虫功能。本文旨在研究HIV PIs对Echinococcus multil... 目前,多房棘球蚴病(alveolar echinococcosis, AE)尚无有效药物治疗手段,迫切需要开发新型治疗药物。前期研究表明,HIV蛋白酶抑制剂(HIV protease inhibitors, HIV PIs)具有潜在抗寄生虫功能。本文旨在研究HIV PIs对Echinococcus multilocularis(Emu)DNA损伤诱导样1蛋白(DNA damage inducible 1 protein, Ddi1)活性的影响。本研究通过构建真核表达重组载体pFastBac1-Emu Ddi1,在昆虫细胞系Sf9细胞中表达筛选出P1代和P2代,纯化出可溶性Ddi1重组蛋白,然后与目的蛋白的荧光底物检测纯化蛋白的活性,进一步检测沙奎那韦(saquinavir, SQV)、利托那韦(ritonavir, RTV)、安普那韦(amprenavir, APV)、阿扎那韦(atazanavir, ATV)、洛匹那韦(lopinavir, LPV)、福沙那韦(fosamprenavir, Fos)、达芦那韦(darunavir, DRV)等7种HIV PIs对Emu Ddi1重组蛋白活性的抑制能力。结果显示:细胞系内真核表达产物的酶活Km为1.422μmol·L^(-1),具有良好的亲和力和活性,最终筛到沙奎那韦对Ddi1蛋白二聚体活性位点的抑制率达67%,其IC_(50)为34,说明沙奎那韦对Emu Ddi1重组蛋白酶活性具有良好的抑制效果。以上结果提示:沙奎那韦抑制重组蛋白Ddi1的活性,可能成为Ddi1的靶向药物,以期为替代药物或开发联合用药提供基础。 展开更多
关键词 蛋白酶抑制剂 多房棘球蚴 dna损伤诱导样蛋白 酶活性 抑制率
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HBV相关慢加急性肝衰竭患者血清巨噬细胞移动抑制因子和游离DNA水平变化及其临床价值
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作者 邹旭晨 石春霞 +2 位作者 张丹眉 郭金 龚作炯 《中西医结合肝病杂志》 CAS 2024年第3期199-201,206,共4页
目的:观察乙型肝炎病毒(HBV)相关慢加急性肝衰竭(ACLF)患者血清巨噬细胞移动抑制因子(MIF)、游离DNA(cf-DNA)水平变化,并分析MIF、cf-DNA在肝衰竭中的作用。方法:选取HBV相关ACLF患者60例(肝衰竭组),体检健康者30例(对照组),收集临床资... 目的:观察乙型肝炎病毒(HBV)相关慢加急性肝衰竭(ACLF)患者血清巨噬细胞移动抑制因子(MIF)、游离DNA(cf-DNA)水平变化,并分析MIF、cf-DNA在肝衰竭中的作用。方法:选取HBV相关ACLF患者60例(肝衰竭组),体检健康者30例(对照组),收集临床资料,试剂盒检测各组患者血清MIF、cf-DNA水平,Pearson相关或Spearman秩相关分析法分析MIF、cf-DNA与临床炎症指标的相关性。结果:与对照组相比,肝衰竭组患者血清MIF和cf-DNA水平升高(P<0.05)。血清MIF与cf-DNA(r=0.482)、降钙素原(PCT)(r=0.566)、超敏C反应蛋白(r=0.285)呈正相关(P<0.05);cf-DNA与PCT(r=0.526)、超敏C反应蛋白(r=0.336)呈正相关(P<0.05)。结论:HBV相关ACLF患者血清MIF、cf-DNA水平升高,MIF和cf-DNA在肝衰竭炎症过程中发挥重要作用。 展开更多
关键词 肝功能衰竭 巨噬细胞移动抑制因子 游离dna 炎症指标
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Low testing rates and high BRCA prevalence: Poly (ADP-ribose) polymerase inhibitor use in Middle East BRCA/homologous recombination deficiency-positive cancer patients
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作者 Naveed Syed Ashish Vittalrao Chintakuntlawar +6 位作者 Deepti Vilasini Aisha Mohamed Al Salami Riad Al Hasan Imrana Afrooz Kanishka Uttam Chandani Ashok Uttam Chandani Aref Chehal 《World Journal of Clinical Oncology》 2024年第7期848-858,共11页
BACKGROUND Poly(ADP-ribose)polymerase inhibitors(PARPis)are approved as first-line therapies for breast cancer gene(BRCA)-positive,human epidermal growth factor receptor 2-negative locally advanced or metastatic breas... BACKGROUND Poly(ADP-ribose)polymerase inhibitors(PARPis)are approved as first-line therapies for breast cancer gene(BRCA)-positive,human epidermal growth factor receptor 2-negative locally advanced or metastatic breast cancer.They are also effective for new and recurrent ovarian cancers that are BRCA-or homologous recombination deficiency(HRD)-positive.However,data on these mutations and PARPi use in the Middle East are limited.AIM To assess BRCA/HRD prevalence and PARPi use in patients in the Middle East with breast/ovarian cancer.METHODS This was a single-center retrospective study of 57 of 472 breast cancer patients tested for BRCA mutations,and 25 of 65 ovarian cancer patients tested for HRD.These adult patients participated in at least four visits to the oncology service at our center between August 2021 and May 2023.Data were summarized using descriptive statistics and compared using counts and percentages.Response to treatment was assessed using Response Evaluation Criteria in Solid Tumors criteria.RESULTS Among the 472 breast cancer patients,12.1%underwent BRCA testing,and 38.5%of 65 ovarian cancer patients received HRD testing.Pathogenic mutations were found in 25.6%of the tested patients:26.3%breast cancers had germline BRCA(gBRCA)mutations and 24.0%ovarian cancers showed HRD.Notably,40.0%of gBRCA-positive breast cancers and 66.0%of HRD-positive ovarian cancers were Middle Eastern and Asian patients,respectively.PARPi treatment was used in 5(33.3%)gBRCA-positive breast cancer patients as first-line therapy(n=1;7-months progression-free),for maintenance(n=2;>15-months progression-free),or at later stages due to compliance issues(n=2).Four patients(66.6%)with HRD-positive ovarian cancer received PARPi and all remained progression-free.CONCLUSION Lower testing rates but higher BRCA mutations in breast cancer were found.Ethnicity reflected United Arab Emirates demographics,with breast cancer in Middle Eastern and ovarian cancer in Asian patients. 展开更多
关键词 Homologous recombination repair BRCA1 BRCA2 Homologous recombination deficiency Ovarian cancer Breast cancer Poly(ADP-ribose)polymerase inhibitors OLAPARIB dna double-strand breaks
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Dynamic bTMB combined with residual ctDNA improves survival prediction in locally advanced NSCLC patients with chemoradiotherapy and consolidation immunotherapy
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作者 Yu Wang Wenqing Wang +9 位作者 Tao Zhang Yin Yang Jianyang Wang Canjun Li Xin Xu Yuqi Wu Ying Jiang Jinghao Duan Luhua Wang Nan Bi 《Journal of the National Cancer Center》 2024年第2期177-187,共11页
Background:Liquid biopsy-based biomarkers,including circulating tumor DNA(ctDNA)and blood tumor muta-tional burden(bTMB),are recognized as promising predictors of prognoses and responses to immune checkpoint inhibitor... Background:Liquid biopsy-based biomarkers,including circulating tumor DNA(ctDNA)and blood tumor muta-tional burden(bTMB),are recognized as promising predictors of prognoses and responses to immune checkpoint inhibitors(ICIs),despite insufficient sensitivity of single biomarker detection.This research aims to determine whether the combinatorial utility of longitudinal ctDNA with bTMB analysis could improve the prognostic and predictive effects.Methods:This prospective two-center cohort trial,consisting of discovery and validation datasets,enrolled unre-sectable locally advanced non-small-cell lung cancer(LA-NSCLC)patients and assigned them to chemoradiother-apy(CRT)or CRT+consolidation ICI cohorts from 2018 to 2022.Blood specimens were collected pretreatment,4 weeks post-CRT,and at progression to assess bTMB and ctDNA using 486-gene next-generation sequencing.DynamicΔbTMB was calculated as post-CRT bTMB minus baseline bTMB levels.Decision curve analyses were performed to calculate Concordance index(C-index).Results:One hundred twenty-eight patients were enrolled.In the discovery dataset(n=73),patients treated with CRT and consolidation ICI had significantly longer overall survival(OS;median not reached[NR]vs 20.2 months;P<0.001)and progression-free survival(PFS;median 25.2 vs 11.4 months;P=0.011)than those without ICI.Longitudinal analysis demonstrated a significant decrease in ctDNA abundance post-CRT(P<0.001)but a relative increase with disease progression.Post-CRT detectable residual ctDNA correlated with significantly shorter OS(median 18.3 months vs NR;P=0.001)and PFS(median 7.3 vs 25.2 months;P<0.001).For patients with residual ctDNA,consolidation ICI brought significantly greater OS(median NR vs 14.8 months;P=0.005)and PFS(median 13.8 vs 6.2 months;P=0.028)benefit,but no significant difference for patients with ctDNA clearance.DynamicΔbTMB was predictive of prognosis.Patients with residual ctDNA and increasedΔbTMB(ΔbTMB>0)had significantly worse OS(median 9.0 vs 23.0 months vs NR;P<0.001)and PFS(median 3.4 vs 7.3 vs 25.2 months;P<0.001).The combinatorial model integrating post-CRT ctDNA withΔbTMB had optimal predictive effects on OS(C-index=0.723)and PFS(C-index=0.693),outperforming individual features.In the independent validation set,we confirmed residual ctDNA predicted poorer PFS(median 50.8 vs 14.3 months;P=0.026)but identified more consolidation ICI benefit(median NR vs 8.3 months;P=0.039).The combined model exhibited a stable predictive advantage(C-index=0.742 for PFS).Conclusions:The multiparameter assay integrating qualitative residual ctDNA testing with quantitativeΔbTMB dynamics improves patient prognostic risk stratification and efficacy predictions,allowing for personalized con-solidation therapy for LA-NSCLC. 展开更多
关键词 Non-small-cell lung cancer Circulating tumor dna Tumor mutational burden Immune checkpoint inhibitor Liquid biopsy
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半胱氨酸蛋白酶抑制剂对大鼠脑缺血模型DNA损伤的实验研究 被引量:93
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作者 王宇卉 邵福源 +2 位作者 卞杰勇 强华 夏春林 《中国临床康复》 CSCD 2003年第7期1064-1065,共2页
目的研究caspase-3抑制剂Ac-DEVD-CMK及calpain抑制剂ALLN干预治疗对大鼠局灶性脑缺血/再灌注模型的神经保护作用。方法经左侧侧脑室注射DEVD或/和ALLN及溶剂二甲基亚砜(DMSO)后,制作大鼠左侧MCA缺血再灌注模型;缺血2h再灌注24h进行TTC... 目的研究caspase-3抑制剂Ac-DEVD-CMK及calpain抑制剂ALLN干预治疗对大鼠局灶性脑缺血/再灌注模型的神经保护作用。方法经左侧侧脑室注射DEVD或/和ALLN及溶剂二甲基亚砜(DMSO)后,制作大鼠左侧MCA缺血再灌注模型;缺血2h再灌注24h进行TTC染色观察梗死灶的形成情况;并分别于缺血2h再灌注24h或48h检测鼠脑中单、双链DNA断裂情况。结果溶剂DMSO预处理组的各项指标与MCAO模型组无明显差异;DEVD或ALLN治疗后缺血侧脑中Klenow及TUNEL阳性细胞数均明显减少,二者合用作用最强。结论Caspase-3与calpain均在缺血性脑损伤中起重要作用,对此进行治疗干预具有潜在的临床应用价值。 展开更多
关键词 实验 半胱氨酸蛋白酶抑制剂 大鼠 脑缺血 dna损伤 动物模型
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DNA甲基化抑制剂研究进展 被引量:17
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作者 李培坤 耿小平 朱立新 《国际药学研究杂志》 CAS 2010年第3期198-202,共5页
DNA甲基化由DNA甲基转移酶催化发生,是真核细胞DNA正常的表观遗传学修饰方式。但异常甲基化常导致肿瘤的发生,以地西他滨为代表的DNA甲基转移酶抑制剂是一类甲基化调节剂,能通过对抑癌基因去甲基化调节达到治疗肿瘤的目的。本文阐述了DN... DNA甲基化由DNA甲基转移酶催化发生,是真核细胞DNA正常的表观遗传学修饰方式。但异常甲基化常导致肿瘤的发生,以地西他滨为代表的DNA甲基转移酶抑制剂是一类甲基化调节剂,能通过对抑癌基因去甲基化调节达到治疗肿瘤的目的。本文阐述了DNA甲基化与肿瘤的关系,以及DNA甲基化抑制剂的研究进展。 展开更多
关键词 dna甲基化 抑制剂 dna甲基转移酶 抗肿瘤药 核苷类
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以重组人DNA拓扑异构酶Ⅰ为靶位从天然产物及其衍生物中筛选抗肿瘤化合物 被引量:5
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作者 杨国武 田新莉 +2 位作者 何国平 林永成 周世宁 《中山大学学报(自然科学版)》 CAS CSCD 北大核心 2004年第3期58-61,共4页
为了在体外以人DNA拓扑异构酶Ⅰ(hTopoⅠ)为靶位进行抗肿瘤化合物的快速筛选,首次使用毕赤酵母表达了hTopoⅠ。在微量反应体系中,测定了化合物抑制hTopoⅠ松驰活性的能力,并用MTT实验验证筛选到的hTopoⅠ抑制剂的抗肿瘤活性。从74个结... 为了在体外以人DNA拓扑异构酶Ⅰ(hTopoⅠ)为靶位进行抗肿瘤化合物的快速筛选,首次使用毕赤酵母表达了hTopoⅠ。在微量反应体系中,测定了化合物抑制hTopoⅠ松驰活性的能力,并用MTT实验验证筛选到的hTopoⅠ抑制剂的抗肿瘤活性。从74个结构新颖的天然产物及人工合成的黄酮类衍生物中筛到6个hTopoⅠ抑制剂,有4个化合物抑制肿瘤细胞生长的能力较强。 展开更多
关键词 dna拓扑异构酶Ⅰ 抑制剂 抗肿瘤 筛选
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DNA甲基化抑制剂对肿瘤细胞中核糖核酸酶抑制因子表达下调的影响(英文) 被引量:4
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作者 陈俊霞 傅攀峰 +1 位作者 王艇 崔秀云 《癌症》 SCIE CAS CSCD 北大核心 2004年第11期1249-1256,共8页
背景与目的:人核糖核酸酶抑制因子(ribonucleaseinhibitor,RI)RI能有效抑制血管生成因子诱导的血管形成及某些可移植性实体瘤在动物体内的生长。然而,RI抗肿瘤的分子机制还未完全阐明。许多抑癌基因通过启动子区域异常的甲基化而使表达... 背景与目的:人核糖核酸酶抑制因子(ribonucleaseinhibitor,RI)RI能有效抑制血管生成因子诱导的血管形成及某些可移植性实体瘤在动物体内的生长。然而,RI抗肿瘤的分子机制还未完全阐明。许多抑癌基因通过启动子区域异常的甲基化而使表达缺失,去甲基化抑制能使其表达恢复。为了进一步了解RI的功能以及探讨RI与肿瘤发生的关系,本实验拟研究甲基化抑制剂5-aza-2'-deoxycytidine(5-Aza-CdR)对肿瘤细胞中RI表达的影响。方法:用5-Aza-CdR作用人乳腺癌细胞系MCF-7、人胃癌细胞系BGC-823、人的前列腺癌细胞系DU-145和人结肠癌细胞系HT-29。通过RT-PCR,蛋白免疫印迹法(Westernblot),免疫荧光(immunofluorescence)和免疫细胞化学(immunocytochemistry)技术分析RI基因的表达。结果:与对照组比较,5-Aza-CdR能显著提高RI基因在MCF-7、BGC-823和DU-145细胞中的表达,RT-PCR检测结果分别为37.2%、46.0%和32.4%,Westernblot检测结果分别为26.4%、20.9%和24.4%(P<0.01);但对HT-29细胞没有明显的影响。结论:RI基因可能与胃癌、前列腺癌和乳腺癌的发生有关。 展开更多
关键词 核糖核酸酶抑制因子 dna甲基化抑制剂 肿瘤 基因表达
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DNA甲基化抑制剂作用机理及其在植物发育生物学研究中的应用 被引量:12
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作者 聂丽娟 王子成 《核农学报》 CAS CSCD 北大核心 2007年第4期362-365,386,共5页
本文综述了DNA甲基化抑制剂作用机理及其在植物发育生物学研究中的应用。DNA甲基化抑制剂使甲基基团不能转移到腺嘌呤或胞嘧啶,导致DNA甲基化反应受阻,从而使基因组甲基化水平降低。DNA甲基化抑制剂已被用于因DNA甲基化引起的植物表观... 本文综述了DNA甲基化抑制剂作用机理及其在植物发育生物学研究中的应用。DNA甲基化抑制剂使甲基基团不能转移到腺嘌呤或胞嘧啶,导致DNA甲基化反应受阻,从而使基因组甲基化水平降低。DNA甲基化抑制剂已被用于因DNA甲基化引起的植物表观遗传研究中,同时它可以代替低温促进植物提早开花,并可能在植物性状改良中得到进一步的研究和应用。 展开更多
关键词 表观遗传学 dna甲基化 dna甲基化抑制剂 5-氮杂胞嘧啶核苷(5-azaC)
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DNA结合分化抑制蛋白1和基质金属蛋白酶9在结直肠癌中的表达及与微血管密度的相关性 被引量:5
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作者 武雪亮 薛军 +6 位作者 王立坤 杨东东 屈明 郭飞 孙光源 韩磊 杨瑞敏 《中国医学科学院学报》 CAS CSCD 北大核心 2016年第6期696-701,共6页
目的探讨结直肠癌组织中DNA结合分化抑制蛋白1(Id-1)和基质金属蛋白酶9(MMP-9)的表达及其与肿瘤微血管生成、临床病理指标的相关性。方法应用免疫组织化学染色法检测50例结直肠癌组织和50例癌旁正常组织中Id-1和MMP-9的表达,以及CD34标... 目的探讨结直肠癌组织中DNA结合分化抑制蛋白1(Id-1)和基质金属蛋白酶9(MMP-9)的表达及其与肿瘤微血管生成、临床病理指标的相关性。方法应用免疫组织化学染色法检测50例结直肠癌组织和50例癌旁正常组织中Id-1和MMP-9的表达,以及CD34标记的微血管密度(MVD)情况。结果 Id-1和MMP-9在结直肠癌组织中阳性表达为72.00%(36/50)、78.00%(39/50),显著高于癌旁正常组织的24.00%(12/50)、28.00%(14/50)(P=0.000);结直肠癌组织中MVD值为17.22±2.08,明显高于癌旁正常组织5.36±2.17(P=0.000);Id-1、MMP-9和MVD均与肿瘤浆膜浸润、TNM分期、癌胚抗原(+)、脉管浸润、淋巴结转移及肝转移相关(P均<0.05),而与年龄、性别、肿瘤大小、分化程度无关(P均>0.05);癌组织中Id-1和MMP-9阳性表达组MVD值显著高于阴性组(P均=0.000);结直肠癌组织中Id-1与MMP-9呈明显正相关性(r=0.429,P=0.000);生存分析显示:Id-1与MMP-9表达与结直肠癌患者预后关系密切,二者高表达提示预后不良。结论 Id-1、MMP-9高表达与结直肠癌的发生演进高度相关,并与MVD呈正相关,二者可能共同参与了肿瘤微血管的生成、肿瘤的浸润及血行转移。 展开更多
关键词 结直肠癌 dna结合分化抑制蛋白1 基质金属蛋白酶9 微血管密度 相关性
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DNA甲基化酶抑制剂对鸡脂肪发育相关基因表达的影响 被引量:3
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作者 宋鹤 张天目 +3 位作者 张潇飞 王桂华 李辉 王宁 《黑龙江畜牧兽医》 CAS 北大核心 2017年第5期89-92,共4页
为了研究DNA甲基化在调控脂肪生长发育中的作用,试验采用甲基化酶抑制剂(5-azadc)处理鸡原代前脂肪细胞,采用Real-time RT-PCR方法分析鸡脂肪生长发育相关基因(PPAR长、C/EBPB、HOPX、KLF7、A-FABP)的表达变化。结果表明:甲基化酶抑制... 为了研究DNA甲基化在调控脂肪生长发育中的作用,试验采用甲基化酶抑制剂(5-azadc)处理鸡原代前脂肪细胞,采用Real-time RT-PCR方法分析鸡脂肪生长发育相关基因(PPAR长、C/EBPB、HOPX、KLF7、A-FABP)的表达变化。结果表明:甲基化酶抑制剂处理均不同程度地提高了PPAR抑、C/EBPB、HOPX、KLF7、A-FABP基因的表达。农业部鸡遗传育种重点实验室前期研究结果也发现,高、低脂肉鸡腹部脂肪组织的DNA甲基化水平存在差异,提示DNA甲基化参与鸡脂肪组织生长发育的调控。 展开更多
关键词 dna甲基化 脂肪发育 基因表达 甲基化酶抑制剂(5-aza-dc)
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DNA甲基化转移酶抑制剂与胸苷酸合成酶抑制剂体外联合用药的抗肿瘤增效作用 被引量:5
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作者 涂洪谊 陈卫民 《生命科学研究》 CAS CSCD 2005年第4期366-370,共5页
通过在体外分别对DNA甲基化转移酶(DNAmethyltransferase,DNMT)抑制剂5-氮杂胞苷(5-azacytidine,5-aza-C)和新型胸苷酸合成酶抑制剂盐酸洛拉曲克(nolatrexeddihydrochloride,Nolatrexed)联合用药于人大肠癌细胞LoVo和人肝癌细胞Hep3B的... 通过在体外分别对DNA甲基化转移酶(DNAmethyltransferase,DNMT)抑制剂5-氮杂胞苷(5-azacytidine,5-aza-C)和新型胸苷酸合成酶抑制剂盐酸洛拉曲克(nolatrexeddihydrochloride,Nolatrexed)联合用药于人大肠癌细胞LoVo和人肝癌细胞Hep3B的相互作用性质的观察,探讨DNMT抑制剂和胸苷酸合成酶抑制剂联合用药的可能性.使用MTT法测定二者单独用药或联合用药的抗肿瘤活性,用抑制浓度的分数之和(sumoffractionalinhibitoryconcentration,SFIC)值及等效剂量分析方法(isobologram)评价联合用药的作用性质.结果显示,联合用药时其SFIC值均小于或等于1,由此得到的等效剂量曲线图形表现为凹形.可见,5-aza-C和Nolatrexed体外联合用药抗肿瘤相互作用性质为明显的增效作用,DNMT抑制剂和胸苷酸合成酶抑制剂联合用药达到抗肿瘤增效作用是可行的. 展开更多
关键词 dna甲基化转移酶抑制剂 胸苷酸合成酶抑制剂 联合用药 抗肿瘤
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