Translation regulation is an important layer of gene expression:Generation of genome-wide expression datasets at multi-omics levels in spatial,temporal,and cell-type resolution is essential for deciphering brain compl...Translation regulation is an important layer of gene expression:Generation of genome-wide expression datasets at multi-omics levels in spatial,temporal,and cell-type resolution is essential for deciphering brain complexity.Regulation of gene expression is a highly dynamic process aiming at the production of precise levels of gene products to guarantee optimal cellular function,in response to physiological cues.Speedy advances in next-generation sequencing enabled the understanding of epigenomic and transcriptomic dynamic landscapes of different brain regions along development,aging,and disease progression.However,the correlation of the“transcriptome”with protein levels is poor because numerous mRNAs are subjected to manipulation of their translation efficiency,to warrant a favorable result under certain conditions.Hence,it is widely accepted that regulation at the translation level is a vital layer of gene expression.Quantification of actively translated mRNA populations(i.e.,“translatome”)is a more reliable predictor of the“proteome”(Wang et al.,2020).展开更多
Detection of local strain at the nanometer scale with high sensitivity remains challenging.Here we report near-field infrared nano-imaging of local strains in bilayer graphene by probing strain-induced shifts of phono...Detection of local strain at the nanometer scale with high sensitivity remains challenging.Here we report near-field infrared nano-imaging of local strains in bilayer graphene by probing strain-induced shifts of phonon frequency.As a non-polar crystal,intrinsic bilayer graphene possesses little infrared response at its transverse optical phonon frequency.The reported optical detection of local strain is enabled by applying a vertical electrical field that breaks the symmetry of the two graphene layers and introduces finite electrical dipole moment to graphene phonon.The activated phonon further interacts with continuum electronic transitions,and generates a strong Fano resonance.The resulted Fano resonance features a very sharp near-field infrared scattering peak,which leads to an extraordinary sensitivity of-0.002%for the strain detection.Our results demonstrate the first nano-scale near-field Fano resonance,provide a new way to probe local strains with high sensitivity in non-polar crystals,and open exciting possibilities for studying strain-induced rich phenomena.展开更多
To study ultrafast processes at the sub-picosecond level, novel methods based on coherent harmonic generation technologies have been proposed to generate ultrashort radiation pulses in existing ring-based light source...To study ultrafast processes at the sub-picosecond level, novel methods based on coherent harmonic generation technologies have been proposed to generate ultrashort radiation pulses in existing ring-based light sources. Using the High Energy Photon Source as an example, we numerically test the feasibility of implementing one coherent harmonic generation technology, i.e.,the echo-enabled harmonic generation(EEHG) scheme, in a diffraction-limited storage ring(DLSR). Two different EEHG element layouts are considered, and the effect of the EEHG process on the electron beam quality is also analyzed. Studies suggest that soft X-ray pulses, with pulse lengths of a few femtoseconds and peak powers of up to1 MW, can be generated by using the EEHG scheme, while causing little perturbation to the regular operation of a DLSR.展开更多
The immune checkpoint blockade has revolutionized cancer treatment.However,not all cancer types are susceptible to this therapy.Even in melanoma,one of the best scenario,about half of the patients do not respond to im...The immune checkpoint blockade has revolutionized cancer treatment.However,not all cancer types are susceptible to this therapy.Even in melanoma,one of the best scenario,about half of the patients do not respond to immune checkpoint blockade.Since CD8+T cell is the main driving force behind cancer elimination,then having a complete and competent T cell repertoire to cover all possible cancer antigens expressed by cancer cells should be a determining factor to the success of this therapy.Conversely,if there are'holes'in patients’T cell repertoire and/or'weak spots'manifested as functional dysregulation or exhaustion on T cells specific to a set of cancer antigens that dominantly expressed by cancer cells,cancer immune escape is inevitable.However,these two types of cancer immune escape might need different treatment strategies:the first group with'holes'in the T cell repertoire,whether the'holes'are taking on a form of missing T cells to cover these cancer antigens or missing high-affinity TCRs that are known to be more sensitive to antigen stimulation,would be benefited from TCR re-directed adoptive cell transfer(ACT)therapy;the other group with T cell repertoire'weak spots'would be benefited from immune checkpoint blockade alone or in combination with additional stimulatory factors such as cytokines and peptide vaccine.In the past decade,we have developed several tools to profile the T cell repertoire from T cell receptor diversity to T cell receptor affinity to high-throughput linking antigen specificity to single T cell receptor sequences in large scale.In this talk,I will first introduce these tools and then give examples on how we use them to answer some of the fundamental questions in systems immunology with a focus on cancer immunology,which in turn help us design new therapeutics immune engineering.展开更多
Softswitch technology integrates the su-periorities of both an intelligence net-work and the Internet, which embodiesits maturity and advancement. With ahierarchical network model, it effectivelysolves problems of evo...Softswitch technology integrates the su-periorities of both an intelligence net-work and the Internet, which embodiesits maturity and advancement. With ahierarchical network model, it effectivelysolves problems of evolution and convergenceof current communication networks. It also fol-展开更多
Three-dimensional (3-D)self-assembly of nanos- tructures and nanodevices on a large scale remains a grand quest for mankind.Freestanding nanostructured assemblies with controlled 3-D shapes can exhibit attractive prop...Three-dimensional (3-D)self-assembly of nanos- tructures and nanodevices on a large scale remains a grand quest for mankind.Freestanding nanostructured assemblies with controlled 3-D shapes can exhibit attractive properties for sensor and other applications. Protocols for 3-D self-assembly that can be scaled up for mass production on a large up to tonnage)scale, while preserving morphological features on a small (down to nanometer)scale,are needed to allow for widespread use of 3-D nanostructures in advanced devices.However,these often conflicting requirements of scalability and precision pose a difficult challenge for synthetic (man-made)processing routes.展开更多
In this paper,the Web-based integration methodology and framework have been developed to facilitate collabora- tive and concurrent engineering design in distributed manufacturing environments.The distributed concurren...In this paper,the Web-based integration methodology and framework have been developed to facilitate collabora- tive and concurrent engineering design in distributed manufacturing environments.The distributed concurrent engineering and co- design are discussed as key components in the mechanism.The related integration system is presented,which includes four function- al modules:co-design,Web-based visualization,manufacturing analysis and look-up service.It can be used for a design team geo- graphically distributed to organize a collaborative and concurrent engineering design effectively.In particular,the collaborative mechanism incorporated with Java-based and Internet-enabled technologies can generate extended strategies for design and planning. Thus,the proposed integration architecture enables the system to be generic,open and scalable.Finally,for the trend of global manufacturing,a case study of Internet-enabled collaborative optimization is introduced and a discussion on teamwork capability is made.展开更多
Although chimeric antigen receptor(CAR)T cells have altered the treatment landscape for B cell malignancies,the risk of on-target,off-tumour toxicity has hampered their development for solid tumours because most targe...Although chimeric antigen receptor(CAR)T cells have altered the treatment landscape for B cell malignancies,the risk of on-target,off-tumour toxicity has hampered their development for solid tumours because most target antigens are shared with normal cells1,2.Researchers have attempted to apply Boolean-logic gating to CAR T cells to prevent toxicity3-5;however,a truly safe and effective logic-gated CAR has remained elusive6.展开更多
Therapeutic oligonucleotides have emerged as a powerful drug modality with the potential to treat a wide range of diseases;however,the rising number of therapies poses a manufacturing challenge.Existing synthetic meth...Therapeutic oligonucleotides have emerged as a powerful drug modality with the potential to treat a wide range of diseases;however,the rising number of therapies poses a manufacturing challenge.Existing synthetic methods use stepwise extension of sequences immobilized on solid supports and are limited by their scalability and sustainability.We report a biocatalytic approach to efficiently produce oligonucleotides in a single operation where polymerases and endonucleases work in synergy to amplify complementary sequences embedded within catalytic self-priming templates.This approach uses unprotected building blocks and aqueous conditions.We demonstrate the versatility of this methodology through the synthesis of clinically relevant oligonucleotide sequences containing diverse modifications.展开更多
Substance use disorder has a damaging effect on the family members of alcoholics and drug users.On the other hand,the reactions and behaviours of family members may negatively influence a person with substance use dis...Substance use disorder has a damaging effect on the family members of alcoholics and drug users.On the other hand,the reactions and behaviours of family members may negatively influence a person with substance use disorder.The behaviours of significant others of a person with substance use disorder that contribute to the maintenance of substance use disorder are called enabling.This study aimed to explore enabling behaviours of wives of persons with substance use disorder in Chapter 8 of Alcoholic Anonymous’Big Book by utilising qualitative content analysis.Alcoholics Anonymous(AA)is one of the most commonly used programs for recovery from alcoholism.The current study sought to help mental health professionals get a better understanding of the views and premises of the AA program in reference to enabling behaviours of wives by conducting a qualitative content analysis of the AA Big Book.The study also discusses the healthy behaviours suggested by the authors of the Big Book and the comprehensiveness of the text for the readers.展开更多
基金funded by the Israel Science Foundation(grants No.1036/12 and 1228/20)(to OES).
文摘Translation regulation is an important layer of gene expression:Generation of genome-wide expression datasets at multi-omics levels in spatial,temporal,and cell-type resolution is essential for deciphering brain complexity.Regulation of gene expression is a highly dynamic process aiming at the production of precise levels of gene products to guarantee optimal cellular function,in response to physiological cues.Speedy advances in next-generation sequencing enabled the understanding of epigenomic and transcriptomic dynamic landscapes of different brain regions along development,aging,and disease progression.However,the correlation of the“transcriptome”with protein levels is poor because numerous mRNAs are subjected to manipulation of their translation efficiency,to warrant a favorable result under certain conditions.Hence,it is widely accepted that regulation at the translation level is a vital layer of gene expression.Quantification of actively translated mRNA populations(i.e.,“translatome”)is a more reliable predictor of the“proteome”(Wang et al.,2020).
基金Supported by the National Key Research and Development Program of China (Grant No.2016YFA0302001)the National Natural Science Foundation of China (Grant Nos.11774224,12074244,11521404,and 61701394)+1 种基金support from the Program for Professor of Special Appointment (Eastern Scholar) at Shanghai Institutions of Higher Learningadditional support from a Shanghai talent program。
文摘Detection of local strain at the nanometer scale with high sensitivity remains challenging.Here we report near-field infrared nano-imaging of local strains in bilayer graphene by probing strain-induced shifts of phonon frequency.As a non-polar crystal,intrinsic bilayer graphene possesses little infrared response at its transverse optical phonon frequency.The reported optical detection of local strain is enabled by applying a vertical electrical field that breaks the symmetry of the two graphene layers and introduces finite electrical dipole moment to graphene phonon.The activated phonon further interacts with continuum electronic transitions,and generates a strong Fano resonance.The resulted Fano resonance features a very sharp near-field infrared scattering peak,which leads to an extraordinary sensitivity of-0.002%for the strain detection.Our results demonstrate the first nano-scale near-field Fano resonance,provide a new way to probe local strains with high sensitivity in non-polar crystals,and open exciting possibilities for studying strain-induced rich phenomena.
基金supported by National Natural Science Foundation of China(No.11475202,11405187)the Youth Innovation Association of Chinese Academy of SciencesKey Research Program of Frontier Sciences,CAS(No.QYZDJ-SSW-SLH001)
文摘To study ultrafast processes at the sub-picosecond level, novel methods based on coherent harmonic generation technologies have been proposed to generate ultrashort radiation pulses in existing ring-based light sources. Using the High Energy Photon Source as an example, we numerically test the feasibility of implementing one coherent harmonic generation technology, i.e.,the echo-enabled harmonic generation(EEHG) scheme, in a diffraction-limited storage ring(DLSR). Two different EEHG element layouts are considered, and the effect of the EEHG process on the electron beam quality is also analyzed. Studies suggest that soft X-ray pulses, with pulse lengths of a few femtoseconds and peak powers of up to1 MW, can be generated by using the EEHG scheme, while causing little perturbation to the regular operation of a DLSR.
文摘The immune checkpoint blockade has revolutionized cancer treatment.However,not all cancer types are susceptible to this therapy.Even in melanoma,one of the best scenario,about half of the patients do not respond to immune checkpoint blockade.Since CD8+T cell is the main driving force behind cancer elimination,then having a complete and competent T cell repertoire to cover all possible cancer antigens expressed by cancer cells should be a determining factor to the success of this therapy.Conversely,if there are'holes'in patients’T cell repertoire and/or'weak spots'manifested as functional dysregulation or exhaustion on T cells specific to a set of cancer antigens that dominantly expressed by cancer cells,cancer immune escape is inevitable.However,these two types of cancer immune escape might need different treatment strategies:the first group with'holes'in the T cell repertoire,whether the'holes'are taking on a form of missing T cells to cover these cancer antigens or missing high-affinity TCRs that are known to be more sensitive to antigen stimulation,would be benefited from TCR re-directed adoptive cell transfer(ACT)therapy;the other group with T cell repertoire'weak spots'would be benefited from immune checkpoint blockade alone or in combination with additional stimulatory factors such as cytokines and peptide vaccine.In the past decade,we have developed several tools to profile the T cell repertoire from T cell receptor diversity to T cell receptor affinity to high-throughput linking antigen specificity to single T cell receptor sequences in large scale.In this talk,I will first introduce these tools and then give examples on how we use them to answer some of the fundamental questions in systems immunology with a focus on cancer immunology,which in turn help us design new therapeutics immune engineering.
文摘Softswitch technology integrates the su-periorities of both an intelligence net-work and the Internet, which embodiesits maturity and advancement. With ahierarchical network model, it effectivelysolves problems of evolution and convergenceof current communication networks. It also fol-
文摘Three-dimensional (3-D)self-assembly of nanos- tructures and nanodevices on a large scale remains a grand quest for mankind.Freestanding nanostructured assemblies with controlled 3-D shapes can exhibit attractive properties for sensor and other applications. Protocols for 3-D self-assembly that can be scaled up for mass production on a large up to tonnage)scale, while preserving morphological features on a small (down to nanometer)scale,are needed to allow for widespread use of 3-D nanostructures in advanced devices.However,these often conflicting requirements of scalability and precision pose a difficult challenge for synthetic (man-made)processing routes.
文摘In this paper,the Web-based integration methodology and framework have been developed to facilitate collabora- tive and concurrent engineering design in distributed manufacturing environments.The distributed concurrent engineering and co- design are discussed as key components in the mechanism.The related integration system is presented,which includes four function- al modules:co-design,Web-based visualization,manufacturing analysis and look-up service.It can be used for a design team geo- graphically distributed to organize a collaborative and concurrent engineering design effectively.In particular,the collaborative mechanism incorporated with Java-based and Internet-enabled technologies can generate extended strategies for design and planning. Thus,the proposed integration architecture enables the system to be generic,open and scalable.Finally,for the trend of global manufacturing,a case study of Internet-enabled collaborative optimization is introduced and a discussion on teamwork capability is made.
文摘Although chimeric antigen receptor(CAR)T cells have altered the treatment landscape for B cell malignancies,the risk of on-target,off-tumour toxicity has hampered their development for solid tumours because most target antigens are shared with normal cells1,2.Researchers have attempted to apply Boolean-logic gating to CAR T cells to prevent toxicity3-5;however,a truly safe and effective logic-gated CAR has remained elusive6.
文摘Therapeutic oligonucleotides have emerged as a powerful drug modality with the potential to treat a wide range of diseases;however,the rising number of therapies poses a manufacturing challenge.Existing synthetic methods use stepwise extension of sequences immobilized on solid supports and are limited by their scalability and sustainability.We report a biocatalytic approach to efficiently produce oligonucleotides in a single operation where polymerases and endonucleases work in synergy to amplify complementary sequences embedded within catalytic self-priming templates.This approach uses unprotected building blocks and aqueous conditions.We demonstrate the versatility of this methodology through the synthesis of clinically relevant oligonucleotide sequences containing diverse modifications.
文摘Substance use disorder has a damaging effect on the family members of alcoholics and drug users.On the other hand,the reactions and behaviours of family members may negatively influence a person with substance use disorder.The behaviours of significant others of a person with substance use disorder that contribute to the maintenance of substance use disorder are called enabling.This study aimed to explore enabling behaviours of wives of persons with substance use disorder in Chapter 8 of Alcoholic Anonymous’Big Book by utilising qualitative content analysis.Alcoholics Anonymous(AA)is one of the most commonly used programs for recovery from alcoholism.The current study sought to help mental health professionals get a better understanding of the views and premises of the AA program in reference to enabling behaviours of wives by conducting a qualitative content analysis of the AA Big Book.The study also discusses the healthy behaviours suggested by the authors of the Big Book and the comprehensiveness of the text for the readers.