Effects of Mapping Methods on Accuracy of Protein Coding Regions Prediction

[Objective] To discuss the effects of major mapping methods for DNA sequence on the accuracy of protein coding regions prediction,and to find out the effective mapping methods.[Method] By taking Approximate Correlation（AC） as the full measure of the prediction accuracy at nucleotide level,the windowed narrow pass-band filter（WNPBF） based prediction algorithm was applied to study the effects of different mapping methods on prediction accuracy.[Result] In DNA data sets ALLSEQ and HMR195,the Voss and Z-Curve methods are proved to be more effective mapping methods than paired numeric（PN）,Electron-ion Interaction Potential（EIIP） and complex number methods.[Conclusion] This study lays the foundation to verify the effectiveness of new mapping methods by using the predicted AC value,and it is meaningful to reveal DNA structure by using bioinformatics methods.

Fatigue Topology Optimization Design Based on Distortion Energy Theory and Independent Continuous Mapping Method

Fatigue failure is a common failure mode under the action of cyclic loads in engineering applications,which often occurs with no obvious signal.The maximum structural stress is far below the allowable stress when the structures are damaged.Aiming at the lightweight structure,fatigue topology optimization design is investigated to avoid the occurrence of fatigue failure in the structural conceptual design beforehand.Firstly,the fatigue life is expressed by topology variables and the fatigue life filter function.The continuum fatigue optimization model is established with the independent continuous mapping(ICM)method.Secondly,fatigue life constraints are transformed to distortion energy constraints explicitly by taking advantage of the distortion energy theory.Thirdly,the optimization formulation is solved by the dual sequence quadratic programming(DSQP).And the design scheme of lightweight structure considering the fatigue characteristics is obtained.Finally,numerical examples illustrate the practicality and effectiveness of the fatigue optimization method.This method further expands the theoretical application of the ICM method and provides a novel approach for the fatigue optimization problem.

Variable-Coefficient Mapping Method Based on Elliptical Equation and Exact Solutions to Nonlinear SchrSdinger Equations with Variable Coefficient

In this paper, by means of the variable-coefficient mapping method based on elliptical equation, we obtain explicit solutions of nonlinear Schrodinger equation with variable-coefficient. These solutions include Jacobian elliptic function solutions, solitary wave solutions, soliton-like solutions, and trigonometric function solutions, among which some are found for the first time. Six figures are given to illustrate some features of these solutions. The method can be applied to other nonlinear evolution equations in mathematical physics.

Stochastic response analysis of noisy system with non-negative real-power restoring force by generalized cell mapping method

The stochastic response of a noisy system with non-negative restoring force is investigated. The generalized cell mapping （GCM） method compute the transient and stationary probability density functions （PDFs） real-power is used to Combined with the global properties of the noise-free system, the evolutionary process of the tran- sient PDFs is revealed. The results show that stochastic P-bifurcation occurs when the system parameter varies in the response analysis and the stationary PDF evolves from bimodal to unimodal along the unstable manifold during the bifurcation.

Dual-wavelength flash Raman mapping method for measuring thermal diffusivity of the suspended nanowire

In this paper,we present a dual-wavelength flash Raman(DFR)mapping method for measuring the thermal diffusivity of a suspended nanowire.A heating pulse is used to heat the nanowire sample,and a probing pulse of different wavelength is used to measure the increase in temperature.The laser absorption coefficient can be eliminated by normalization,and the thermal diffusivity of the sample can be extracted from the normalized temperature increase.An infinite heat conduction model is used in this method to avoid the influence of boundary thermal resistance.By changing the position of the probing laser center,the measurement sensitivity of thermal diffusivity can be further improved.The position of maximum sensitivity is influenced by the thermal diffusivity of the nanowire,width of the heating pulse,radius of the heating laser spot,and characteristic length of the sample.To comprehensively analyze the influences of the various parameters,obtain the best measurement conditions,and attain maximum sensitivity,we propose a dimensionless physical model to analyze the heat conduction of the suspended nanowire.Based on the analysis of the best dimensionless parameters,the corresponding appropriate measurement conditions can be determined.Sensitivity analysis shows that when the radius of the heating laser spot is 1%of the length of the nanowire,the sensitivity of the DFR mapping method can be more than four times that of the concentric DFR method for measuring the thermal diffusivity of the nanowire.

Extended Mapping Transformation Method and Its Applications to Nonlinear Partial Differential Equation（s）

In this paper, we extend the mapping transformation method through introducing variable coefficients.By means of the extended mapping transformation method, many explicit and exact general solutions with arbitrary functions for some nonlinear partial differential equations, which contain solitary wave solutions, trigonometric function solutions, and rational solutions, are obtained.

A Template-Based Approach for Automatic Mapping between Business Process and BPEL Process

In order to support just-in-time reconfiguration of business process execution language （BPEL） process, a template-based mapping method is proposed to map business level process to BPEL process. The method builds up mapping relationships between the key points of business level process and BPEL process, which helps users to adjust the business level process with simplified operations, and automatically maps the changes to BPEL. In addition, a case of the application of the method in a clothing enterprise was illustrated.

ICM Method Combined with Meshfree Approximation for Continuum Structure

The independent continuous mapping（ICM） method is integrated into element free Galerkin method and a new implementation of topology optimization for continuum structure is presented.To facilitate the enforcement of the essential boundary condition and derivative of various sensitivities,a singular weight function in element free Galerkin method is introduced.Material point variable is defined to illustrate the condition of material point and its vicinity instead of element or node.The topological variables field is constructed by moving least square approximation which inherits the continuity and smoothness of the weight function.Due to reciprocal relationships between the topological variables and design variables,various structural responses sensitivities are derived according to the method for calculating the partial derivatives of compound functions.Numerical examples indicate that checkerboard pattern and mesh-dependence phenomena are overcome without additional restriction methods.

Mapping of oil-source faults in reservoire-cap rock combinations without a source rock

Oil and gas exploration near faults in shallow strata is investigated in this study based on an analysis of oil-source faults in reservoire-cap rock combinations without a source rock.The oil-source faults were mapped by superimposition of the distribution area of oil-source faults and the leakage area of cap rocks.This method is applied to the mapping of oil-source faults for two sets of reservoire-cap rock combinations without a source rock in the Banqiao area of the Qikou Sag in the Bohai Bay Basin,eastern China.Combination B is formed by a mudstone cap rock of the middle sub-member of the 1st member of the Shahejie Formation(E3s1 M)with its underlying reservoir,while Combination C is formed by a mudstone cap rock of the 2nd member of the Dongying Formation(E_(3)d_(2))with its underlying reservoir.The results show that the oil-source faults of Combination B are relatively better developed and mainly occur in the northeast and southeast,while those of Combination C are not as well developed and are only distributed at the southeastern edge of the study area with a small proportion in the north.These results are consistent with the fact that oil and gas are mainly distributed near oil-source faults,proving the method proposed is workable in determining the oil-source faults in reservoire-cap rock combinations without a source rock.

Tolerance of edge cascades with coupled map lattices methods

This paper studies the cascading failure on random networks and scale-free networks by introducing the tolerance parameter of edge based on the coupled map lattices methods. The whole work focuses on investigating some indices including the number of failed edges, dynamic edge tolerance capacity and the perturbation of edge. In general, it assumes that the perturbation is attributed to the normal distribution in adopted simulations. By investigating the effectiveness of edge tolerance in scale-free and random networks, it finds that the larger tolerance parameter λ can more efficiently delay the cascading failure process for scale-free networks than random networks. These results indicate that the cascading failure process can be effectively controlled by increasing the tolerance parameter λ. Moreover, the simulations also show that, larger variance of perturbation can easily trigger the cascading failures than the smaller one. This study may be useful for evaluating efficiency of whole traffic systems, and for alleviating cascading failure in such systems.

PHYSICAL VALUE MAPPING ALGORITHM OF MESH IN FINE CAE ANALYSIS OF AUTOMOBILE BODY STRUCTURE

A physical value mapping （PVM） algorithm based on finite element mesh from the stamped part in stamping process to the product is presented, In order to improve the efficiency of the PVM algorithm, a search way from the mesh of the product to the mesh of the stamped part will be adopted. At the same time, the search process is divided into two steps： entire search （ES） and local search （LS）, which improve the searching efficiency. The searching area is enlarged to avoid missing projection elements in ES process. An arc-length method is introduced in LS process. The validity is confirmed by the results of the complex industry-forming product.

Woolen Textile Simulation by Synthesis Mapping

This paper proposes a new rapid and efficient method for woolen textile simulation- mapping synthesize. This method uses a stochastic function to simulate fuzz on some types of wool textile. The wool yarns are simulated on the basis of Phong illumination model. In order to obtain a visual effect of the wool textile with fuzz, the light intensity of fuzz is synthesized as a color parameter in the Phong illumination model after the yams have been simulated. The model of woolen textile with fuzz can be built eventually.With synthesis mapping methods, user can choose his favorite fuzz density on the wool by controlling some appropriate parameters.

Concurrent topology optimization for minimization of total mass considering load-carrying capabilities and thermal insulation simultaneously

The present work introduces a novel concurrent optimization formulation to meet the requirements of lightweight design and various constraints simultaneously.Nodal displacement of macrostructure and effective thermal conductivity of microstructure are regarded as the constraint functions, which means taking into account both the loadcarrying capabilities and the thermal insulation properties.The effective properties of porous material derived from numerical homogenization are used for macrostructural analysis. Meanwhile, displacement vectors of macrostructures from original and adjoint load cases are used for sensitivity analysis of the microstructure. Design variables in the form of reciprocal functions of relative densities are introduced and used for linearization of the constraint function. The objective function of total mass is approximately expressed by the second order Taylor series expansion. Then, the proposed concurrent optimization problem is solved using a sequential quadratic programming algorithm, by splitting into a series of sub-problems in the form of the quadratic program. Finally, several numerical examples are presented to validate the effectiveness of the proposed optimization method. The various effects including initial designs, prescribed limits of nodal displacement, and effective thermal conductivity on optimized designs are also investigated. An amount of optimized macrostructures and their corresponding microstructures are achieved.

Some new exact solutions of Jacobian elliptic function about the generalized Boussinesq equation and Boussinesq-Burgers equation

By using the modified mapping method, we find some new exact solutions of the generalized Boussinesq equation and the Boussinesq-Burgers equation. The solutions obtained in this paper include Jacobian elliptic function solutions, combined Jacobian elliptic function solutions, soliton solutions, triangular function solutions.

New Periodic Wave Solutions to Generalized Klein-Gordon and Benjamin Equations

By making use of extended mapping method and auxiliary equation for finding new periodic wave solu tions of nonlinear evolution equations in mathematical physics, we obtain some new periodic wave solutions for generalized Klein-Cordon equation and Benjamin equation, which cannot be found in previous work. This method also can be used to find new periodic wave solutions of other nonlinear evolution equations.

New exact solutions of nonlinear Klein-Gordon equation

New exact solutions, expressed in terms of the Jacobi elliptic functions, to the nonlinear Klein-Gordon equation are obtained by using a modified mapping method. The solutions include the conditions for equation＇s parameters and travelling wave transformation parameters. Some figures for a specific kind of solution are also presented.

Periodic Semifolded Solitary Waves for (2+1)-Dimensional Variable Coefficient Broer-Kaup System

Applying the extended mapping method via Riccati equation, many exact variable separation solutions for the （2＆1 ）-dimensional variable coefficient Broer-Kaup equation are obtained. Introducing multiple valued function and Jacobi elliptic function in the seed solution, special types of periodic semifolded solitary waves are derived. In the long wave limit these periodic semifolded solitary wave excitations may degenerate into single semifolded localized soliton structures. The interactions of the periodic semifolded solitary waves and their degenerated single semifolded soliton structures are investigated graphically and found to be completely elastic.

New exact periodic solutions to (2+1)-dimensional dispersive long wave equations

In this paper, we make use of the auxiliary equation and the expanded mapping methods to find the new exact periodic solutions for （2＋1）-dimensional dispersive long wave equations in mathematical physics, which are expressed by Jacobi elliptic functions, and obtain some new solitary wave solutions （m → 1）. This method can also be used to explore new periodic wave solutions for other nonlinear evolution equations.

Some New Solutions of Jacobi Elliptic Functions to mBBM Equation

The modified mapping method is further improved by the expanded expression of u（ξ） that contains the terms of the first-order derivative of function f（ξ）. Some new exact solutions to the mBBM equation are determined by means of the method. We can obtain many new solutions in terms of the Jacobi elliptic functions of the equation.