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Effect of Heavy Metals Pollution on Protein Biosynthesis in Catfish
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作者 S. A. Habib A. M. Abou Shehatta Samah 《Journal of Water Resource and Protection》 2013年第5期555-562,共8页
The present study was carried out to evaluate the pollution and its effect on the quality of catfish. Four sites in Eygpt were chosen for the research, Ras El-Bar (Site 1) as control, Shatta (Site 2), Kafr El-Bateekh ... The present study was carried out to evaluate the pollution and its effect on the quality of catfish. Four sites in Eygpt were chosen for the research, Ras El-Bar (Site 1) as control, Shatta (Site 2), Kafr El-Bateekh (Site 3), and Talkha (Site 4). The research was carried out on water, sediments and catfish (serum and muscles). Nitrite, nitrate and ammonia were determined in water and sediment. Also, RNA and DNA were determined in serum samples and the muscles of the catfish. In addition, the concentrations of heavy metals (Pb, Cd, Fe, Zn and Cu) were estimated in water, sediments and the muscles of catfish. Also, hepatosomatic index, liver water content, condition factor, lipid and protein contents were determined in the fish. The concentrations of nitrite, nitrate and ammonia in water and sediment of Site 4 and the levels of heavy metals especially Pb and Cd in water, sediment and muscle of catfish from Sites 3 and 4 were highly elevated compared to those of the control. On the other hand, DNA, RNA and protein contents in the catfish of Sites 3 and 4 decreased. The results illustrated that, Cd and Pb levels in the muscle of catfish were negatively correlated with DNA, RNA and with the protein contents. In conclusion, the accumulation of heavy metals in catfish tissues therefore, can cause health problems in human after catfish intake. 展开更多
关键词 CATFISH protein biosynthesis HEAVY METALS POLLUTION
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Prokaryotical expression of structural and non-structural proteins of hepatitis G virus 被引量:4
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作者 Ning-Shao Xia~1 Hai-Jie Yang~1 Jun Zhang~1 Chang-Qing Lin~1 Ying-Bin Wang~1 Juan Wang~1 Mei-Yun Zhan~2 MH Ng~3 1 Key Laboratory of the Ministry of Education for Cell Biology and Tumor Cell Engineering,Xiamen University,Xiamen 361005,Fujian Province,China2 Institute of Virology,Chinese Academy of Preventive Medicine Beijing 100052,China3 Department of Microbiology,Hoog Kong University,Hongkong,China 《World Journal of Gastroenterology》 SCIE CAS CSCD 2001年第5期642-646,共5页
AIM To study the epitope distribution of hepatitis G virus (HGV) and to seek for the potential recombinant antigens for the development of HGV diagnositic reagents.METHODS Fourteen clones encompassing HGV gene fragmen... AIM To study the epitope distribution of hepatitis G virus (HGV) and to seek for the potential recombinant antigens for the development of HGV diagnositic reagents.METHODS Fourteen clones encompassing HGV gene fragments from core to NS3 and NS5 were constructed using prokaryotic expression vector pRSET and (or)pGEX. and expressed in E. coli. Western blotting and ELISA were used to detect the immunoreactivity of these recombinant proteins.``RESULTS One clone with HGV fragment from core to El(Gl). one from E2 (G31), three from NS3 (G6, G61, G7),one from NS5B (G821) and one chimeric fragment from NS3and NS5B (G61 821) could be expressed well and showed obvious immunoreactivity by Western blotting.One clone with I-KGV framment from NS5B (G82) was also well expressed, but could not show immunoreactivity by Western blotting. No obvious expression was found in the other six clones. All the expressed recombinant proteins were in inclusion body form, except the protein G61 which could be expressed in soluble form. Further purified recombinant proteins Gl, G,31, G61, G821 and G61 821were detected in indirected ELISA as coating antigen respectively. Only recombinant Gl could still show immunoreactivity, and the other four recombinant proteins failed to react to the HGV antibody positive sera.Western blotting results indicated that the immunoactivity of these four recombinant proteins were lost during purification.``CONCLUSION Core to El, E2. NS3 and NS5 fragment of HGV contain antigenic epitopes, which could be produced in prokaryotically expressed recombinant proteins. A high. yield recombinant protein (Gl) located in HGV core to E1 could remain its epitope after purification, which showed the potential that G1 could be used as a coating antigen to develop an ELISA kit for HGV specific antibody diagnosis. 展开更多
关键词 HEPATITIS agents GB/ GENETICS genes VIRAL VIRAL proteins/biosynthesis
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Phosphorus deficiency affects multiple macromolecular biosynthesis pathways of Thalassiosira weissflogii 被引量:2
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作者 WANG Xiuxiu HUANG Bangqin ZHANG Huan 《Acta Oceanologica Sinica》 SCIE CAS CSCD 2014年第4期85-91,共7页
Phosphorus(P) is one of the key nutrients for the growth of phytoplankton. In this study, we used a method coupling label-free quantitation with liquid chromatography–mass spectrometry(LFQ–LC–MS/MS) to track th... Phosphorus(P) is one of the key nutrients for the growth of phytoplankton. In this study, we used a method coupling label-free quantitation with liquid chromatography–mass spectrometry(LFQ–LC–MS/MS) to track the change of relative protein abundance between P-replete and P-deficient treatments in a non-model diatom, Thalassiosira weissflogii. Out of the 631 proteins identified, 132 were found to have significant changes in abundance(〉1.5 folds) between the two treatments, especially those proteins involved in macromolecular biosynthesis pathways. For example, the up-regulation of sulfolipid biosynthesis protein in the P-deficient culture suggested a switch from using phospholipids to sulfolipids. In addition, the ribosome subunits and tRNA synthetases were down-regulated, which might explain the decrease in protein content in the P-deficient culture. A vacuolar sorting receptor homologous protein was found to be 9.2-folds up-regulated under P-deficiency, indicating an enhancement in the vacuolar sorting pathway for protein degradation. Our results show that T. weissflogii has sophisticated responses in multiple macromolecular metabolism pathways under P-deficiency, a mechanism which can be critical for this species to survive under various levels of P availability in the environment 展开更多
关键词 phosphorus deficiency Thalassiosira weissflogii LFQ–LC–MS/MS sulfolipid biosynthesis protein
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New clues concerning pigment biosynthesis in green colored fiber provided by proteomics-based analysis 被引量:2
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作者 LI Yan-jun SUN Shi-chao +4 位作者 ZHANG Xin-yu WANG Xiang-fei LIU Yong-chang XUE Fei SUN Jie 《Journal of Integrative Agriculture》 SCIE CAS CSCD 2018年第1期46-53,共8页
To separate the proteins related to pigment synthesis in green colored fiber (GCF), we performed a comparative proteomic analysis to identify the differentially expressed proteins between green cotton fiber and a wh... To separate the proteins related to pigment synthesis in green colored fiber (GCF), we performed a comparative proteomic analysis to identify the differentially expressed proteins between green cotton fiber and a white near-isogenic line (NIL). One differential spot identified as phenylocumaran benzylic ether redutase-like protein (PCBER) was expressed only in GCF, but was not found in white colored fiber (WCF) at any time points. Since PCBER was a key enzyme in lignans biosynthesis, total lignans were extracted from GCF and WCF and their content was determined by using a chromotropic acid spectrophotometric method. The results showed that total lignans content in GCF was significantly higher than that in WCF. The qPCR analysis for two PLR genes associated with lignans biosynthesis showed that the expression level of two genes was much higher in GCF than that in WCF at 24 and 27 days post anthesis (DPA), which may be responsible for the higher lignans content in GCF. Our study suggested that PCBER and lignans may be responsible for the color difference between GCF and WCF. Additionally, p-dimethylaminocinnamaldehyde (DMACA) staining demonstrated that the pigment in GCF was not proanthocyanidins, and was different from that in brown colored fiber (BCF). This study provided new clues for uncovering the molecular mechanisms related to pigment biosynthesis in GCF. 展开更多
关键词 green colored cotton proteomics upland cotton pigment biosynthesis phenylocumaran benzylic ether redutase- like protein
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EXPRESSION OF c-myc GENE AND BIOSYNTHESIS OF BIOLOGICAL MACROMOLECULES IN ANTISENSE TRANSFECTANT HL_(60)~R-9
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作者 李尹雄 范慕贞 +1 位作者 张京俐 梁植权 《Chinese Journal of Cancer Research》 SCIE CAS CSCD 1996年第4期235-239,共5页
The recombinant plasmid PGC was constructed for transcription unit of c-myc gene with diorientation in vitro, to make RNA probes for detection of c-myc mRNA and antisence RNA expression of tranfectant HL-9,which was o... The recombinant plasmid PGC was constructed for transcription unit of c-myc gene with diorientation in vitro, to make RNA probes for detection of c-myc mRNA and antisence RNA expression of tranfectant HL-9,which was obtained from HL60 cells transfected with inducible c-myc antisense RNA expression plasmid. The results from HL-9 cells induced by Cd2+ indicated that expression of c-myc antisense RNA increased with Cd2+ concentration and exposure time, while c-myc mRNA expression progressively reduced. Using immunohistochemical technique no c-myc P62 protein expression was detected. The incorporation of 3H-TdR, 3H-UR and 3H-Leu revealed significant suppression of DNA, RNA and protein biosynthesis. It is suggested that the reversion changes previously reported in malignant Phenotypes of HL-9 cells and the inhibition of macromolecular biosynthesis mentioned above were associated with the blockade of c-myc gene expression by its antisense RNA. 展开更多
关键词 c-myc antisense RNA Gene expression DNA biosynthesis RNA biosynthesis protein biosynthesis
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巴西橡胶树大、小橡胶粒子在乙烯调控天然橡胶合成中的作用分析
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作者 王丹 徐兵强 +3 位作者 孙勇 彭存智 常丽丽 仝征 《热带作物学报》 CSCD 北大核心 2024年第6期1127-1138,共12页
巴西橡胶树(Heveabrasiliensis)是重要的产胶植物,胶乳中的橡胶粒子(RP)是合成天然橡胶的重要细胞器,但其响应外源乙烯刺激调控天然橡胶合成的具体机制还不清楚。为了明确不同大小RP在此过程中的作用,本研究通过分离外源乙烯刺激后胶乳... 巴西橡胶树(Heveabrasiliensis)是重要的产胶植物,胶乳中的橡胶粒子(RP)是合成天然橡胶的重要细胞器,但其响应外源乙烯刺激调控天然橡胶合成的具体机制还不清楚。为了明确不同大小RP在此过程中的作用,本研究通过分离外源乙烯刺激后胶乳中不同直径的RP,并与对照组进行差异蛋白质组学分析。结果发现:在直径较大的大橡胶粒子(LRP)中鉴定出响应乙烯刺激差异蛋白37个,分别参与天然橡胶合成、糖酵解/糖异生、碳代谢及氨基酸生物合成等代谢通路,其中包含4个REF/SRPP家族成员;在直径较小的小橡胶粒子(SRP)中鉴定出56个差异蛋白,分别参与内质网中的蛋白质加工、内吞及剪接体等代谢通路,其中包含5个REF/SRPP家族成员。关键差异蛋白REF138具有较多等电点(pI)和分子量不同的蛋白亚型,LRP中低于标准等电点(4.80)的REF138亚型响应乙烯刺激积累减少,高于标准等电点的REF138亚型响应乙烯刺激积累增加;与LRP不同,SRP上有更多的REF138亚型响应乙烯刺激发生变化,具有标准分子量(14.7kDa)的REF138亚型响应乙烯刺激积累增加,高于标准分子量的亚型响应乙烯刺激积累减少。针对关键差异蛋白的互作蛋白功能分析发现,REF/SRPP家族成员REF138、REF175、REF258、SRPP117及SRPP204间存在相互作用,可能形成蛋白复合体结合在RP上。除REF/SRPP家族成员外,REF138的互作蛋白主要参与剪接体及内吞代谢通路,REF258的互作蛋白主要参与脂代谢过程与次生代谢产物合成调控。综上,通过对LRP及SRP上响应乙烯刺激差异蛋白及其互作蛋白的功能分析初步揭示了LRP和SRP响应外源乙烯刺激调控天然橡胶合成的代谢调控机制。 展开更多
关键词 巴西橡胶树 橡胶粒子 乙烯 天然橡胶合成调控 蛋白互作
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课程思政与产学研一体融合的“生物化学”教学案例设计
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作者 王佳 孙新晓 +1 位作者 袁其朋 申晓林 《生物加工过程》 CAS 2024年第4期454-459,共6页
“生物化学”课程不仅传递知识,更是承载育人使命的重要组成部分。本文探讨了在“生物化学”教学课程中如何将课程思政与产学研一体融合,并设计了“生物化学”教学案例。在案例设计上,通过对知识点进行深度剖析,巧妙地将思政元素与科研... “生物化学”课程不仅传递知识,更是承载育人使命的重要组成部分。本文探讨了在“生物化学”教学课程中如何将课程思政与产学研一体融合,并设计了“生物化学”教学案例。在案例设计上,通过对知识点进行深度剖析,巧妙地将思政元素与科研实例有机整合,形成协同效应,引导学生多角度提高自身能力及素质。以蛋白质的生物合成为例,讨论了教学设计的三个层次:知识点的细致梳理、思政要素的挖掘以及最新科研进展的引入。在教学过程中,通过互动学习、教学手段创新和引导学生思考等手段,有效地将知识传递、能力培养和价值引领进行深度融合。最后,分析教学中存在的困难并提出了相应的改进思路,为类似的课程设计提供经验。 展开更多
关键词 生物化学 蛋白质生物合成 产学研一体 课程思政
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生物合成法生产麦角硫因的研究进展
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作者 李亮 徐姗姗 姜艳军 《生物技术通报》 CAS CSCD 北大核心 2024年第1期86-99,共14页
麦角硫因(ergothioneine,ERG)作为一种稀有的天然含硫组氨酸衍生物,已被证明具有强大的抗氧化性和诸多生物学功能。因此,ERG受到越来越多研究人员和产品开发人员的关注。目前,ERG已被广泛应用于食品、化妆品和医疗等行业。研究表明只有... 麦角硫因(ergothioneine,ERG)作为一种稀有的天然含硫组氨酸衍生物,已被证明具有强大的抗氧化性和诸多生物学功能。因此,ERG受到越来越多研究人员和产品开发人员的关注。目前,ERG已被广泛应用于食品、化妆品和医疗等行业。研究表明只有少数细菌和真菌可体内合成ERG,植物、动物和人类自身均不能直接合成ERG,只能从其他来源获取。ERG可通过生物提取法、化学合成法以及生物合成法获得,但由于传统生产方式(生物提取法和化学合成法)存在产量低、生产效率差和生产成本较高等问题,限制了该产品的规模化生产和应用。因此,亟需开发一种高效、经济且安全、可靠的ERG生产方式以满足市场的需求。近年来合成生物学快速发展,利用基因工程、蛋白质工程和代谢工程等技术提高生物合成法生产ERG的能力已逐渐成为研究热点。本文将论述ERG的生物学活性和功能,介绍ERG生物合成途径和ERG在食品、化妆品和医疗等行业的应用前景,比较ERG主要的生产方式,总结并梳理近年来采取各种工程策略通过生物合成法生产ERG的研究进展;并就如何利用基因工程、蛋白质工程和代谢工程提高ERG产量提出几点工程策略,以期为生物合成法高产ERG提供理论参考和研究思路。 展开更多
关键词 麦角硫因 生物合成法 生物合成途径 基因工程 蛋白质工程 代谢工程 发酵
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食药用菌表观遗传和蛋白质翻译后修饰研究进展
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作者 王子 仇昊 +2 位作者 李烨凡 刘锐 赵明文 《食用菌学报》 CSCD 北大核心 2024年第2期1-9,共9页
食药用菌具有较高的营养价值和药用价值。随着人们对健康的重视程度日益提高,对食药用菌的需求量也不断增加。表观遗传和蛋白质翻译后修饰不仅调控食药用菌的生长发育,还调控食药用菌的次级代谢产物合成。笔者综述了近年来食药用菌中表... 食药用菌具有较高的营养价值和药用价值。随着人们对健康的重视程度日益提高,对食药用菌的需求量也不断增加。表观遗传和蛋白质翻译后修饰不仅调控食药用菌的生长发育,还调控食药用菌的次级代谢产物合成。笔者综述了近年来食药用菌中表观遗传和蛋白质翻译后修饰的研究进展,以期为食药用菌的菌株改良,精准栽培及行业发展提供参考。 展开更多
关键词 食药用菌 表观遗传 蛋白质翻译后修饰 次级代谢产物 生物合成
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核糖体蛋白参与的核糖体生物合成在癌症中的研究
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作者 李琼瑜 《中国现代药物应用》 2024年第4期174-180,共7页
核糖体是由核糖核酸(RNA)和核糖体蛋白(RP)组装而成的大分子核糖核蛋白(RNP)复合物,在蛋白质生物合成中起关键作用。核糖体生物合成(RB)对调控细胞的呼吸至关重要,影响细胞的生长和增殖。本文主要以细胞质核糖体蛋白(CRP)和线粒体核糖... 核糖体是由核糖核酸(RNA)和核糖体蛋白(RP)组装而成的大分子核糖核蛋白(RNP)复合物,在蛋白质生物合成中起关键作用。核糖体生物合成(RB)对调控细胞的呼吸至关重要,影响细胞的生长和增殖。本文主要以细胞质核糖体蛋白(CRP)和线粒体核糖体蛋白质(MRP)为切入点,介绍细胞内的核糖体生物合成过程,以及其在肿瘤发生发展中的异常调控。 展开更多
关键词 核糖体生物合成 核糖体蛋白 线粒体核糖体蛋白质 癌症
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Protein engineering for natural product biosynthesis:expanding diversity for therapeutic applications
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作者 Sarah Oluwatobi Otun Jordy Alexis Lerma-Escalera +1 位作者 Khayalethu Ntushelo Ikechukwu Achilonu 《Journal of Bio-X Research》 2023年第2期49-60,共12页
In this dispensation of the fourth industrial revolution,protein engineering has become a popular approach for increasing enzymatic activity,stability,and titer in the biosynthesis of natural products.This is attribut... In this dispensation of the fourth industrial revolution,protein engineering has become a popular approach for increasing enzymatic activity,stability,and titer in the biosynthesis of natural products.This is attributed to its numerous advantages(over direct isolation from plants or via chemical synthesis),including decreasing or eliminating reaction byproducts,high precision,moderate handling of intricate and chemically unstable chemicals,overall reusability,and cost efficiency.Recently,protein engineering tools have advanced to redesign and enhance natural product biosynthesis.These methods include direct evolution,substrate engineering,medium engineering,enzyme engineering and immobilization,structure-assisted protein engineering,and advanced computational.Recent successes in implementing these emerging protein engineering technologies were critically discussed in this article.Also,the advantages,limitations,and applications in industrial and medical biotechnology were discussed.Last,future research directions and potential were also highlighted. 展开更多
关键词 antibodies engineering industrial enzymes natural product biosynthesis protein engineering POLYKETIDES synthetic biology
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Sleep deprivation increase the expression of inducible heat shock protein 70 in rat gastric mucosa 被引量:14
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作者 Xi-Zhong Shen Marcel W.L. Koo Chi-Hin Cho Department of Gastroenterology,Zhongshan Hospital,Fudan University,136 Yixueyuan Road,Shanghai 200032,ChinaDepartment of Pharmacology.Faculty of Medicine,University of Hong Kong,5 Sassoon Road,Pokfulam,Hong Kong,ChinaSupported by .Dr.Marcel W.L.Koo,Department of Pharmacology,FacuLty of Medicine,the University of Hong Kong,5 Sassoon Road,Hong Kong,China.Wlkoo@hkusua.hku.hk 《World Journal of Gastroenterology》 SCIE CAS CSCD 2001年第4期496-499,共4页
AIM To .investigate if sleep deprivation is able to increase the expression of inducible heat shock protein 70 in gastric mucosa and its possible role in mucosal defense.METHODS Rats for sleep disruption were placed i... AIM To .investigate if sleep deprivation is able to increase the expression of inducible heat shock protein 70 in gastric mucosa and its possible role in mucosal defense.METHODS Rats for sleep disruption were placed inside a computerized rotating drum, gastric mucosa was taken from rats with 1, 3 and 7 d sleep deprivation. RT-PCR,immunohistochemistry and Western blotting were used to determine the expression of heat shock protein 70.Ethanol (500 mL@ L 1, I.g.) was used to induce gastric muceea damage.RESULTS RT-PCR, Western blotting and immunostaining confirmed that the sleep deprivation as a stress resulted in significantly greater expression of inducible heat shock protein 70 in gastric mucosa of rats. After the 500mL@ L-1 ethanol challenge, the ulcer area found in the rats with 7 d sleep deprivation (19.15 ± 4.2) mm2 was significantly lower (P<0.01) than the corresponding control (53.7 ± 8.1) mm2.CONCLUSION Sleep deprivation as a stress, in addition to lowering the gastric mucosal barrier, is able to stimulate the expression of inducible heat shock protein 70 in gastric mucosa of rats, the heat shock protein 70 may play an important role in gastric mucosal protection. 展开更多
关键词 SLEEP DEPRIVATION heat shock proteins 70/biosynthesis GASTRIC MUCOSA rats
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The DUF579 proteins GhIRX15s regulate cotton fiber development by interacting with proteins involved in xylan synthesis
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作者 Mengyun Li Feng Chen +6 位作者 Jingwen Luo Yanan Gao Jinglong Cai Wei Zeng Monika S.Doblin Gengqing Huang Wenliang Xu 《The Crop Journal》 SCIE 2024年第4期1112-1125,共14页
Cotton provides the most abundant natural fiber for the textile industry.The mature cotton fiber largely consists of secondary cell walls with the highest proportion of cellulose and a small amount of hemicellulose an... Cotton provides the most abundant natural fiber for the textile industry.The mature cotton fiber largely consists of secondary cell walls with the highest proportion of cellulose and a small amount of hemicellulose and lignin.To dissect the roles of hemicellulosic polysaccharides during fiber development,four IRREGULAR XYLEM 15(IRX15)genes,GhIRX15-1/-2/-3/-4,were functionally characterized in cotton.These genes encode DUF579 domain-containing proteins,which are homologs of AtIRX15 involved in xylan biosynthesis.The four GhIRX15 genes were predominantly expressed during fiber secondary wall thickening,and the encoded proteins were localized to the Golgi apparatus.Each GhIRX15 gene could restore the xylan deficient phenotype in the Arabidopsis irx15irx15l double mutant.Silencing of GhIRX15s in cotton resulted in shorter mature fibers with a thinner cell wall and reduced cellulose content as compared to the wild type.Intriguingly,GhIRX15-2 and GhIRX15-4 formed homodimers and heterodimers.In addition,the GhIRX15s showed physical interaction with glycosyltransferases GhGT43C,GhGT47A and GhGT47B,which are responsible for synthesis of the xylan backbone and reducing end sequence.Moreover,the GhIRX15s can form heterocomplexes with enzymes involved in xylan modification and side chain synthesis,such as GhGUX1/2,GhGXM1/2 and GhTBL1.These findings suggest that GhIRX15s participate in fiber xylan biosynthesis and modulate fiber development via forming large multiprotein complexes. 展开更多
关键词 Cotton fiber Xylan biosynthesis GhIRX15s protein-protein interaction protein complexes
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PDGF-BB在胆道闭锁患儿肝脏中的表达及其与上皮间质转化的相关性研究
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作者 周辉 李索林 +3 位作者 时保军 仲智勇 方燕斌 杨晓锋 《临床小儿外科杂志》 CAS CSCD 2023年第3期238-243,共6页
目的探讨胆道闭锁(biliary atresia,BA)患儿肝脏中血小板源性生长因子-BB(platelet-derived growth factor,PDGF-BB)、锌指转录因子(Snail 1)和上皮间质转化(epithelial-mesenchymal transition,EMT)的表达情况以及三者之间的关系。方... 目的探讨胆道闭锁(biliary atresia,BA)患儿肝脏中血小板源性生长因子-BB(platelet-derived growth factor,PDGF-BB)、锌指转录因子(Snail 1)和上皮间质转化(epithelial-mesenchymal transition,EMT)的表达情况以及三者之间的关系。方法回顾性分析2018年1月至2019年12月河北医科大学第二医院小儿外科收治的BA患儿25例(BA组)、胆总管囊肿患儿15例(CCC组)以及肝脏肿瘤患儿10例(NL组)的临床资料;收集患儿活检组织,分别应用免疫组织化学法、实时荧光定量PCR检测PDGF-BB、Snail 1、E钙黏素(E-cadherin)和N钙黏素(N-cadherin)的表达情况,并对上述指标进行相关性分析。结果BA组患儿肝脏中PDGF-BB、Snail 1和N-cadherin的mRNA和蛋白表达均显著高于CCC组和NL组,差异有统计学意义(P<0.05),E-cadherin的mRNA和蛋白表达均显著低于CCC组和NL组,差异有统计学意义(P<0.05)。其中PDGF-BB与Snail 1 mRNA和蛋白的表达呈正相关(r=0.772,P<0.05;r=0.780,P<0.05);PDGF-BB与N-cadherin mRNA和蛋白表达呈正相关性(r=0.835,P<0.05;r=0.702,P<0.05);PDGF-BB与E-cadherin mRNA和蛋白表达呈负相关(r=-0.756,P<0.05;r=-0.696,P<0.05);Snail 1与N-cadherin mRNA和蛋白表达呈正相关(r=0.723,P<0.05;r=0.702,P<0.05);Snail 1与E-cadherin mRNA和蛋白表达呈负相关(r=-0.720,P<0.05;r=-0.636,P<0.05)。肝纤维化程度与PDGF-BB的表达呈正相关(r=0.977,P<0.05);肝纤维化程度与E-cadherin蛋白表达呈负相关(r=-0.722,P<0.05);肝纤维化程度与N-cadherin蛋白表达呈正相关(r=0.711,P<0.05);肝纤维化程度与Snail 1表达呈正相关(r=-0.810,P<0.05)。结论PDGF-BB可能通过增强转录因子Snail 1的转录活性,促进BA患儿发生EMT,这为BA患儿的诊治提供了新的理论依据。 展开更多
关键词 胆道闭锁 血小板源性生长因子 上皮-间质转化 蛋白质生物合成
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维生素K2的生物合成及其甲萘醌基团合成酶的功能分析
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作者 张秋华 刘曼路 +2 位作者 王峥 张一鸣 苏海佳 《化工学报》 EI CSCD 北大核心 2023年第1期342-354,共13页
维生素K2(VK2)作为2-甲基-1,4-萘醌(简称甲萘醌)家族的衍生物,在预防骨质疏松和心血管钙化方面发挥着重要作用,随着其市场需求的日益增加,实现VK2产业化并降低生产成本成为大家关注的焦点。首先概述了VK2传统发酵工艺现状及面临的问题,... 维生素K2(VK2)作为2-甲基-1,4-萘醌(简称甲萘醌)家族的衍生物,在预防骨质疏松和心血管钙化方面发挥着重要作用,随着其市场需求的日益增加,实现VK2产业化并降低生产成本成为大家关注的焦点。首先概述了VK2传统发酵工艺现状及面临的问题,之后详细分析了VK2生物合成途径及其基因工程改造策略,可以将枯草芽孢杆菌产量提高至1549.6 mg·L^(-1),产量是传统发酵菌株的7倍以上。此外,还围绕合成途径中经典甲萘醌骨架合成酶的功能及其蛋白结构进行汇总分析,通过对酶的蛋白结构、催化特异性和机理进行分析,揭示各个功能酶在VK2合成途径中发挥的作用及其内在关系。最后从合成生物学技术发展角度对VK2途径设计、构建与应用进行了展望,为提升VK2工业化产量提供理论参考。 展开更多
关键词 维生素K2 生物合成 甲萘醌 蛋白结构
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非天然氨基酸的应用及生物合成策略
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作者 李海宁 张红兵 +2 位作者 耿革霞 李冉 贾振华 《生物技术通报》 CAS CSCD 北大核心 2023年第12期43-55,共13页
非天然氨基酸是一类不受遗传密码子约束的特殊氨基酸,它们具有独特的空间构型和化学性质,为多个领域提供了新的资源和机会。当前,非天然氨基酸可以通过化学合成和生物合成两种方式合成,其中相较于化学合成,生物合成具有更高的效率和立... 非天然氨基酸是一类不受遗传密码子约束的特殊氨基酸,它们具有独特的空间构型和化学性质,为多个领域提供了新的资源和机会。当前,非天然氨基酸可以通过化学合成和生物合成两种方式合成,其中相较于化学合成,生物合成具有更高的效率和立体选择性、更低的成本和污染,是一种有潜力的合成方式。本文综述了非天然氨基酸在蛋白质探针、酶工程、抗体药物偶联物、抗菌肽等方面的研究进展和应用案例,展示了非天然氨基酸如何突破天然氨基酸的限制,拓展蛋白质的结构和功能多样性。同时介绍了非天然氨基酸的生物合成策略,包括代谢工程中的静态调控和动态调控策略以及发酵优化策略。最后,展望了非天然氨基酸的生物合成和应用的未来发展趋势和挑战,为非天然氨基酸的合成和开发提供参考和启示。 展开更多
关键词 非天然氨基酸 生物合成 代谢工程 非天然蛋白质
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细胞色素P450酶在香精香料绿色生物合成中的应用 被引量:1
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作者 郁慧丽 李爱涛 《生物技术通报》 CAS CSCD 北大核心 2023年第4期24-37,共14页
细胞色素P450酶是一类含亚铁血红素的蛋白超家族,来源广泛,几乎存在于所有的生命形式中。P450酶被誉为“黄金催化剂”,主要参与生物体内源物质合成、异源物质代谢及天然产物的生物合成,具有底物谱广、催化反应类型多样、催化立体专一性... 细胞色素P450酶是一类含亚铁血红素的蛋白超家族,来源广泛,几乎存在于所有的生命形式中。P450酶被誉为“黄金催化剂”,主要参与生物体内源物质合成、异源物质代谢及天然产物的生物合成,具有底物谱广、催化反应类型多样、催化立体专一性强等优点,使得它们在药物/毒物代谢、工程化生物合成等方面受到越来越多的关注。其中,P450酶可以实现常温、常压、中性条件下特定惰性C-H键选择性羟化,在高附加值精细化学品的生物合成中具有重要应用价值。本文介绍了P450选择性羟化的催化机制及几种常见的P450电子传递系统,并结合蛋白质工程与代谢工程,以柠檬烯含氧衍生物、诺卡酮、檀香醇、4-羟基异佛尔酮、大环内酯麝香等高附加值化合物的生物合成为例,综述了单酶催化的生物转化或全细胞从头合成的方式在天然香精香料生物合成中的探索与应用,探讨其面临的挑战并展望了其应用前景。 展开更多
关键词 细胞色素P450酶 香精香料 生物合成 蛋白质工程 代谢工程
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Design and biosynthesis of functional protein nanostructures 被引量:4
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作者 Feng Li Dianbing Wang +2 位作者 Juan Zhou Dong Men Xian-En Zhang 《Science China(Life Sciences)》 SCIE CAS CSCD 2020年第8期1142-1158,共17页
Proteins are one of the major classes of biomolecules that execute biological functions for maintenance of life.Various kinds of nanostructures self-assembled from proteins have been created in nature over millions of... Proteins are one of the major classes of biomolecules that execute biological functions for maintenance of life.Various kinds of nanostructures self-assembled from proteins have been created in nature over millions of years of evolution,including protein nanowires,layers and nanocages.These protein nanostructures can be reconstructed and equipped with desired new functions.Learning from and manipulating the self-assembly of protein nanostructures not only help to deepen our understanding of the nature of life but also offer new routes to fabricate novel nanomaterials for diverse applications.This review summarizes the recent research progress in this field,focusing on the characteristics,functionalization strategies,and applications of protein nanostructures. 展开更多
关键词 protein nanostructures protein nanowires S-LAYER protein nanocages self-assembly biosynthesis FUNCTIONALIZATION
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紫心甘薯IbMYB1上游7个调控蛋白的互作与表达分析
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作者 付丹文 陈亚慧 +1 位作者 杨少华 高峰 《广东农业科学》 CAS 2023年第6期1-9,共9页
【目的】对前期筛选到的紫心甘薯IbMYB1上游7个调控蛋白(IbERF1、IbPDC、IbPGP19、IbSCF、IbWRKY1、IbJOX4和IbEIN3-2)的互作与表达进行分析,进一步阐明花色素苷在特定时空合成与积累的调控网络。【方法】采用酵母双杂交和双分子荧光互... 【目的】对前期筛选到的紫心甘薯IbMYB1上游7个调控蛋白(IbERF1、IbPDC、IbPGP19、IbSCF、IbWRKY1、IbJOX4和IbEIN3-2)的互作与表达进行分析,进一步阐明花色素苷在特定时空合成与积累的调控网络。【方法】采用酵母双杂交和双分子荧光互补试验,对7个调控因子之间的相互作用进行检测,使用荧光定量PCR对紫心甘薯和白心甘薯根不同发育时期花色素苷合成调控和筛选的上游调控因子进行基因表达特征分析。【结果】IbERF1与IbSCF、IbWRKY1存在相互作用。双分子荧光互补试验证实了酵母双杂交的试验结果。IbERF1基因在紫心甘薯根不同时期的表达量均低于白心甘薯,且随着根中花色素苷的积累其表达量逐渐降低,IbWRKY1和IbSCF基因在紫心甘薯和白心甘薯根不同发育时期中的表达量,与花色素苷的积累无明显的相关关系。【结论】IbMYB1上游调控蛋白IbERF1、IbSCF可分别与IbWRKY1形成复合物,以转录复合体的形式共同调控IbMYB1表达。推测IbERF1可能负调控花色素苷的合成,IbSCF和IbWRKY1参与紫心甘薯花色素苷的合成与调控,可能还存在更为复杂的机制。 展开更多
关键词 紫心甘薯 花色素苷生物合成 转录因子IbMYB1 上游调控蛋白互作 表达分析
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Fine-tuning brassinosteroid biosynthesis via 3′UTR-dependent decay of CPD mRNA modulates wood formation in Populus
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作者 Dian Wang Xiaoning Hao +8 位作者 Li Xu Mengyan Zhao Congpeng Wang Xihao Yu Yingzhen Kong Mengzhu Lu Gongke Zhou Guohua Chai Xianfeng Tang 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2023年第8期1852-1858,共7页
Brassinosteroids(BRs)are plant hormones that regulate wood formation in trees.Currently,little is known about the post-transcriptional regulation of BR synthesis.Here,we show that during wood formation,fine-tuning BR ... Brassinosteroids(BRs)are plant hormones that regulate wood formation in trees.Currently,little is known about the post-transcriptional regulation of BR synthesis.Here,we show that during wood formation,fine-tuning BR synthesis requires 3′UTR-dependent decay of Populus CONSTITUTIVE PHOTOMORPHOGENIC DWARF 1(PdCPD1).Overexpression of PdCPD1 or its 3′UTR fragment resulted in a significant increase of BR levels and inhibited secondary growth.In contrast,transgenic poplars repressing PdCPD13′UTR expression displayed moderate levels of BR and promoted wood formation.We show that the Populus GLYCINE-RICH RNA-BINDING PROTEIN1(PdGRP1)directly binds to a GU-rich element in 3′UTR of Pd CPD1,leading to its mRNA decay.We thus provide a post-transcriptional mechanism underlying BRs synthesis during wood formation,which may be useful for genetic manipulation of wood biomass in trees. 展开更多
关键词 Brassinsteroids biosynthesis CPD POPULUS RNABINDING protein 3'UTR regulation
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