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Complex heterozygous mutations in hereditary spherocytosis:A case report
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作者 Miao He Yan-Cheng Lv +3 位作者 Yu-Hong Wei Lan-Qin Liu Ling Guo Cheng Li 《World Journal of Clinical Cases》 SCIE 2024年第18期3582-3588,共7页
BACKGROUND The aim of this study was to investigate the complex heterozygous mutations of ANK1 and SPTA1 in the same individual and improve our understanding of hereditary spherocytosis(HS)in children.We also hope to ... BACKGROUND The aim of this study was to investigate the complex heterozygous mutations of ANK1 and SPTA1 in the same individual and improve our understanding of hereditary spherocytosis(HS)in children.We also hope to promote the application of gene detection technology in children with HS,with the goals of identifying more related gene mutations,supporting the acquisition of improved molecular genetic information to further reveal the pathogenesis of HS in children,and providing important guidance for the diagnosis,treatment,and prevention of HS in children.CASE SUMMARY A 1-year and 5-month-old patient presented jaundice during the neonatal period,mild anemia 8 months later,splenic enlargement at 1 year and 5 months,and brittle red blood cell permeability.Genetic testing was performed on the patient,their parents,and sister.Swiss Model software was used to predict the protein structure of complex heterozygous mutations in ANK1 and SPTA1.Genetic testing revealed that the patient harbored a new mutation in the ANK1 gene from the father and a mutation in the SPTA1 gene from the mother.Combined with the clinical symptoms of the children,it is suggested that the newly discovered complex heterozygous mutations of ANK1 and SPTA1 may be the cause,providing important guidance for revealing the pathogenesis,diagnosis,treatment,and promotion of gene detection technology in children with HS.CONCLUSION This case involves an unreported complex heterozygous mutation of ANK1 and SPTA1,which provides a reference for exploring HS. 展开更多
关键词 Hereditary spherocytosis complex heterozygous mutations ANK1 SPTA1 Gene detection technology Case report
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Polycystic kidney and hepatic disease 1 gene mutations in von Meyenburg complexes: Case report 被引量:4
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作者 Su Lin Tian-Yu Shang +7 位作者 Ming-Fang Wang Jian Lin Xiao-Jian Ye Da-Wu Zeng Jiao-Feng Huang Nan-Wen Zhang Yi-Long Wu Yue-Yong Zhu 《World Journal of Clinical Cases》 SCIE 2018年第9期296-300,共5页
Von Meyenburg complexes(VMCs) are a rare type of ductal plate malformation. We herein report two Chinese families with VMCs, and the suspicious gene mutation of this disease. Proband A was a 62-year-old woman with abn... Von Meyenburg complexes(VMCs) are a rare type of ductal plate malformation. We herein report two Chinese families with VMCs, and the suspicious gene mutation of this disease. Proband A was a 62-year-old woman with abnormal echographic presentation of the liver. She received magnetic resonance imaging(MRI) examination and liver biopsy, and the results showed she had VMCs. Histologically proved hepatocellular carcinoma was found 1 year after the diagnosis of VMCs. Proband B was a 57-year-old woman with intrahepatic diffuselesions displayed by abdominal ultrasonography. Her final diagnoses were VMCs, congenital hepatic fibrosis, and hepatitis B surface e antigen-negative chronic hepatitis B after a series of examinations. Then, all the family members of both proband A and proband B were screened for VMCs by MRI or ultrasonography. The results showed that four of the 11 family members from two families, including two males and two females, were diagnosed with VMCs. DNA samples were extracted from the peripheral blood of those 11 individuals of two VMCs pedigrees and subjected to polymerase chain reaction amplification of the polycystic kidney and hepatic disease 1(PKHD1) gene. Two different mutation loci were identified. Heterozygous mutations located in exon 32(c.4280 delG, p.Gly1427 ValfsX 6) in family A and exon 28(c.3118 C>T, p.Arg1040 Ter) in family B were detected. We speculate that PKHD1 gene mutations may be responsible for the development of VMCs. 展开更多
关键词 Von Meyenburg complexES DUCTAL PLATE MALFORMATIONS PKHD1 Gene mutation FIBROSIS
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Effect of the mutation of carotenoids on the dynamics of energy transfer in light-harvesting complexes (LH2) from Rhodobacter sphaeroides 601 at room temperature
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作者 刘伟民 刘源 +4 位作者 刘康俊 闫永丽 郭立俊 徐春和 钱士雄 《Chinese Physics B》 SCIE EI CAS CSCD 2006年第8期1725-1730,共6页
Energy transfers in two kinds of peripheral light-harvesting complexes (LH2) of Rhodobacter sphaeroides (RS) 601 are studied by using femtosecond pump^probe spectroscopy with tunable laser wavelength at room tempe... Energy transfers in two kinds of peripheral light-harvesting complexes (LH2) of Rhodobacter sphaeroides (RS) 601 are studied by using femtosecond pump^probe spectroscopy with tunable laser wavelength at room temperature. These two complexes are native LH2 (RS601) and green carotenoid mutated LH2 (GM309). The obtained results demonstrate that, compared with spheroidenes with ten conjugated double bonds in native RS601, carotenoid in GM309 containing neurosporenes with nine conjugated double bonds can lead to a reduction in energy transfer rate in the B800-to-B850 band and the disturbance in the energy relaxation processes within the excitonic B850 band. 展开更多
关键词 light harvesting complex (LH2) carotenoid mutation energy transfer femtosecond pumpprobe
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Exploring Biocomplexity in Cancer: A Comprehensive Review
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作者 Andras Szasz Gyula Peter Szigeti 《Open Journal of Biophysics》 2024年第2期154-238,共85页
Living objects have complex internal and external interactions. The complexity is regulated and controlled by homeostasis, which is the balance of multiple opposing influences. The environmental effects finally guide ... Living objects have complex internal and external interactions. The complexity is regulated and controlled by homeostasis, which is the balance of multiple opposing influences. The environmental effects finally guide the self-organized structure. The living systems are open, dynamic structures performing random, stationary, stochastic, self-organizing processes. The self-organizing procedure is defined by the spatial-temporal fractal structure, which is self-similar both in space and time. The system’s complexity appears in its energetics, which tries the most efficient use of the available energies;for that, it organizes various well-connected networks. The controller of environmental relations is the Darwinian selection on a long-time scale. The energetics optimize the healthy processes tuned to the highest efficacy and minimal loss (minimalization of the entropy production). The organism is built up by morphogenetic rules and develops various networks from the genetic level to the organism. The networks have intensive crosstalk and form a balance in the Nash equilibrium, which is the homeostatic state in healthy conditions. Homeostasis may be described as a Nash equilibrium, which ensures energy distribution in a “democratic” way regarding the functions of the parts in the complete system. Cancer radically changes the network system in the organism. Cancer is a network disease. Deviation from healthy networking appears at every level, from genetic (molecular) to cells, tissues, organs, and organisms. The strong proliferation of malignant tissue is the origin of most of the life-threatening processes. The weak side of cancer development is the change of complex information networking in the system, being vulnerable to immune attacks. Cancer cells are masters of adaptation and evade immune surveillance. This hiding process can be broken by electromagnetic nonionizing radiation, for which the malignant structure has no adaptation strategy. Our objective is to review the different sides of living complexity and use the knowledge to fight against cancer. 展开更多
关键词 complexity Networks SMALL-WORLD Genetic mutations SELF-ORGANIZING Self-Symmetry Energetic Balance Entropy Nash Equilibrium Games Evolution CANCER Therapy
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Complete mitochondrial DNA sequence analysis in two southern Chinese pedigrees with Leber hereditary optic neuropathy revealed secondary mutations along with the primary mutation 被引量:5
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作者 Lei Shu Yong-Ming Zhang +2 位作者 Xiao-Xiao Huang Chun-Yue Chen Xian-Ning Zhang 《International Journal of Ophthalmology(English edition)》 SCIE CAS 2012年第1期28-31,共4页
AIM: To investigate mitochondrial factors associated with Leber hereditary optic neuropathy (LHON) through complete sequencing and analysis of the mitochondrial genome of Chinese patients with this disease. METHODS: T... AIM: To investigate mitochondrial factors associated with Leber hereditary optic neuropathy (LHON) through complete sequencing and analysis of the mitochondrial genome of Chinese patients with this disease. METHODS: Two unrelated southern Chinese families with LHON and 10 matched healthy controls were recruited, and their entire mitochondrial DNA (mtDNA) was amplified and sequenced with the universal M13 primer. Then DNA sequence analysis and variation identification were performed by DNAssist and Chromas 2 software and compared with authoritative databases such as Mitomap. RESULTS: Mutational analysis of mtDNA in these two Chinese pedigrees revealed one common LHON-associated mutation, G11778A (Arg -> His), in the MT-ND4 gene. In addition, there were two secondary mutations in Pedigree 1: C34971 (Ala -> Val), and C3571T (Leu -> Phe) in the MT-ND1 gene, which have not been reported; and two secondary mutations occurred in Pedigree 2: A10398G (Thr -> Ala) in the MT-ND3 gene, and T14502C (Ile -> Val) in the MT-ND6 gene. Three polymorphisms, A73G, G94A and A263G in the mtDNA control region, were also found. CONCLUSION: Our study confirmed that the known MT-ND4* G11778A mutation is the most significant cause of LHON. The C3497T and C3571T mutations in Pedigree 1 were also both at hot-spots of MT-ND1; they may affect the respiratory chain in coordination with the primary mutation G11778A. In Pedigree 2, the two secondary mutations A10398G of MT-ND3 and T14502C of MT-ND6 may influence mitochondrial respiratory complex I, leading to the mitochondrial respiratory chain dysfunction which results in optic atrophy together with G11778A. Therefore, not only the common primary LHON mutation is responsible for the visual atrophy, but other secondary mtDNA mutations should also be considered when giving genetic counseling. 展开更多
关键词 Leber hereditary optic neuropathy mitochondrial DNA mutation mitochondrial respiratory complex I
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Efficacy of EGFR Tyrosine Kinase Inhibitors in Non-small Cell Lung Cancer Patients Harboring Different Types of EGFR Mutations:A Retrospective Analysis 被引量:8
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作者 刘华丽 韩光 +5 位作者 彭敏 翁一鸣 袁静萍 杨桂芳 于金明 宋启斌 《Journal of Huazhong University of Science and Technology(Medical Sciences)》 SCIE CAS 2017年第6期864-872,共9页
With the development of molecular pathology, many types of epidermal growth factor receptor(EGFR) mutations have been identified. The efficacy of EGFR tyrosine kinase inhibitors(EGFR-TKIs) in non-small cell lung c... With the development of molecular pathology, many types of epidermal growth factor receptor(EGFR) mutations have been identified. The efficacy of EGFR tyrosine kinase inhibitors(EGFR-TKIs) in non-small cell lung cancer(NSCLC) patients with different types of EGFR mutations, especially in patients with single rare mutations or complex mutations(co-occurrence of two or more different mutations), has not been fully understood. This study aimed to examine the efficacy of EGFR-TKIs in NSCLC patients with different types of EGFR mutations. Clinical data of 809 NSCLC patients who harbored different types of EGFR mutations and treated from January 2012 to October 2016 at Renmin Hospital and Zhongnan Hospital, Wuhan, were retrospectively reviewed. The clinical characteristics of these patients and the efficacy of EGFR-TKIs were analyzed. Among these patients, 377 patients had only the EGFR del-19 mutation, 362 patients the EGFR L858R mutation in exon 21, 33 patients single rare mutations and 37 patients complex mutations. Among these 809 patients, 239 patients were treated with EGFR-TKIs. In all the 239 patients, the disease control rate(DCR) was 93.7% with two patients(0.2%) achieving complete response(CR), the median progression free survival(PFS) was 13.0 months(95% confidence interval [CI], 11.6–14.4 months), and the median overall survival(OS) was 55.0 months(95% CI, 26.3–83.7 months). Subgroup analysis revealed that the DCR in patients harboring single rare or complex mutations of EGFR was significantly lower than in those with del-19 or L858 R mutation(P〈0.001). Patients with classic mutations(del-19 and/or L858 R mutations) demonstrated longer PFS(P〈0.001) and OS(P=0.017) than those with uncommon mutations(single rare and/or complex mutations). Furthermore, the patients with single rare mutations had shorter median OS than in those with other mutations. Multivariate Cox regression analysis identified that the type of EGFR mutations was an independent risk factor for PFS(hazard ratio [HR]=0.308, 95% CI, 0.191–0.494, P〈0.001) and OS(HR=0.221, 95% CI, 0.101–0.480, P〈0.001). The results suggest that the single rare or complex EGFR mutations confer inferior efficacy of EGFR-TKIs treatment to the classic mutations. The prognosis of the single rare EGFR mutations is depressing. EGFR-TKIs may be not a good choice for NSCLC patients with single rare mutations of EGFR. Further studies in these patients with uncommon mutations(especially for the patients with single rare mutations) are needed to determine a better precision treatment. 展开更多
关键词 non-small cell lung cancer epidermal growth factor receptor rare mutations complex mutations tyrosine kinase inhibitors
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Presenilin mutations and their impact on neuronal differentiation in Alzheimer’s disease
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作者 Mercedes A.Hernández-Sapiéns Edwin E.Reza-Zaldívar +6 位作者 Ana L.Márquez-Aguirre Ulises Gómez-Pinedo Jorge Matias-Guiu Ricardo R.Cevallos Juan C.Mateos-Díaz Víctor J.Sánchez-González Alejandro A.Canales-Aguirre 《Neural Regeneration Research》 SCIE CAS CSCD 2022年第1期31-37,共7页
The presenilin genes(PSEN1 and PSEN2)are mainly responsible for causing early-onset familial Alzheimer’s disease,harboring~300 causative mutations,and representing~90%of all mutations associated with a very aggressiv... The presenilin genes(PSEN1 and PSEN2)are mainly responsible for causing early-onset familial Alzheimer’s disease,harboring~300 causative mutations,and representing~90%of all mutations associated with a very aggressive disease form.Presenilin 1 is the catalytic core of theγ-secretase complex that conducts the intramembranous proteolytic excision of multiple transmembrane proteins like the amyloid precursor protein,Notch-1,N-and E-cadherin,LRP,Syndecan,Delta,Jagged,CD44,ErbB4,and Nectin1a.Presenilin 1 plays an essential role in neural progenitor maintenance,neurogenesis,neurite outgrowth,synaptic function,neuronal function,myelination,and plasticity.Therefore,an imbalance caused by mutations in presenilin 1/γ-secretase might cause aberrant signaling,synaptic dysfunction,memory impairment,and increased Aβ42/Aβ40 ratio,contributing to neurodegeneration during the initial stages of Alzheimer’s disease pathogenesis.This review focuses on the neuronal differentiation dysregulation mediated by PSEN1 mutations in Alzheimer’s disease.Furthermore,we emphasize the importance of Alzheimer’s disease-induced pluripotent stem cells models in analyzing PSEN1 mutations implication over the early stages of the Alzheimer’s disease pathogenesis throughout neuronal differentiation impairment. 展开更多
关键词 familial Alzheimer’s disease familial Alzheimer’s disease-induced pluripotent stem cells models induced pluripotent stem cells neurogenesis neuronal differentiation Notch presenilin 1 PSEN1 mutations γ-secretase complex
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新发TSC2基因位点突变致儿童结节性硬化症并色素脱斑相关癫痫
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作者 王雪红 庄生琴 +2 位作者 马溪遥 张博 李锋同 《延安大学学报(医学科学版)》 2024年第1期59-64,共6页
结节性硬化症(tuberous sclerosis complex,TSC)是一种常染色体显性遗传的神经皮肤综合征,以累及多个器官系统为特点。TSC1和TSC2是TSC两个主要的致病基因,二者中任一基因的突变可导致蛋白质结构变化从而导致功能改变,最终表现为TSC的... 结节性硬化症(tuberous sclerosis complex,TSC)是一种常染色体显性遗传的神经皮肤综合征,以累及多个器官系统为特点。TSC1和TSC2是TSC两个主要的致病基因,二者中任一基因的突变可导致蛋白质结构变化从而导致功能改变,最终表现为TSC的各种临床表型。目前,已有多个TSC相关的TSC2和TSC1位点突变被发现。然而,临床接诊过程中,我们收治了1例尚未见报道的TSC2基因c.4569+1G>T杂合突变相关的癫痫发作伴色素脱斑的儿童TSC,在此予以报道,以期为TSC相关疾病的临床诊断及研究提供线索。 展开更多
关键词 结节性硬化症 癫痫 TSC2 TSC1 突变
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基于降维粒子群的大电网断面功率极限计算方法
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作者 宣鹏华 李岩松 +2 位作者 龚承霄 陈兴雷 刘君 《华北电力大学学报(自然科学版)》 CAS 北大核心 2024年第4期77-86,I0006,共11页
随着电力系统的发展,系统运行方式日益复杂。为了提高电力系统运行安全水平,提出一种基于降维粒子群的大电网断面功率极限计算方法。首先综合考虑大电网静态安全稳定约束和暂态稳定约束,建立断面功率极限计算模型;然后,提出了基于功率... 随着电力系统的发展,系统运行方式日益复杂。为了提高电力系统运行安全水平,提出一种基于降维粒子群的大电网断面功率极限计算方法。首先综合考虑大电网静态安全稳定约束和暂态稳定约束,建立断面功率极限计算模型;然后,提出了基于功率灵敏度的降维粒子群算法,根据功率灵敏度和聚合系数对可调节发电机组进行分群处理,利用降维粒子群算法计算得到了极限功率、发电机组功率调节量以及极限功率制约因素,实现了大电网断面功率极限的快速寻优。最后在我国某地区2128节点电网和我国某跨区12643节点联网中验证了该方法的有效性和正确性。 展开更多
关键词 复杂大电网 输电断面 灵敏度 自适应变异粒子群算法 极限功率
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结节性硬化症三例及基因突变分析
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作者 曹晓佳 李楠 韩建文 《中国麻风皮肤病杂志》 2024年第6期387-390,共4页
目的:明确3例结节性硬化症(tuberous sclerosis complex, TSC)患者基因突变位点。方法:对3例患者血液样本进行全外显子基因检测,对患者3进行一代测序验证。结果:患者1存在结节性硬化1型(TSC1)基因杂合插入变异TSC1:NM_000368.5:exon10:c... 目的:明确3例结节性硬化症(tuberous sclerosis complex, TSC)患者基因突变位点。方法:对3例患者血液样本进行全外显子基因检测,对患者3进行一代测序验证。结果:患者1存在结节性硬化1型(TSC1)基因杂合插入变异TSC1:NM_000368.5:exon10:c.989dupT:p.S331Efs^(*)10;患者2和患者3发现存在结节性硬化2型(TSC2)基因的杂合突变,分别是:TSC2:NM_000548.5:exon22:c.2481_2486 del:p.V828_K829 del和TSC2:NM_000548.5:exon5:c.348delG:p.V118Sfs^(*)64;患者3父母未检出该变异。结论:患者2和患者3的2个突变在OMIM中未查询到相应记录,患者3推测为新发变异或父母一方存在生殖细胞嵌合,丰富了该疾病的突变位点谱。 展开更多
关键词 结节性硬化症 基因突变 TSC1 TSC2 基因诊断
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1例伴TSC2嵌合突变的结节性硬化症并多发血管平滑肌脂肪瘤的诊断及治疗
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作者 葛慧 蔡照华 李宁宁 《基础医学与临床》 CAS 2024年第10期1357-1362,共6页
目的探讨结节性硬化症(TSC)相关肝血管平滑肌脂肪瘤(AML)、肾AML患者的诊断、治疗及病程中基因诊断的局限性和多学科诊疗的重要性。方法基于1例患者详尽的临床资料,依托多学科会诊,对病程中多次基因检测结果进行深入分析,明确诊断后给... 目的探讨结节性硬化症(TSC)相关肝血管平滑肌脂肪瘤(AML)、肾AML患者的诊断、治疗及病程中基因诊断的局限性和多学科诊疗的重要性。方法基于1例患者详尽的临床资料,依托多学科会诊,对病程中多次基因检测结果进行深入分析,明确诊断后给予药物治疗并评价疗效。患者为31岁男性,患有肝、肾多发不典型AML 12年,同时检查发现鼻部及口周血管纤维瘤、臀部鲨革斑、头部MRI提示皮层发育不良、牙釉质缺损史等多系统表现,多年来仅以反复AML切除术为主要治疗方法。为进一步确认患者的基因突变特征及明确诊断,进行了深入基因分析。结果经深入基因分析发现,外周血和肿瘤组织中分别存在突变丰度4.04%和10.38%的TSC2 c.2353C>T(p.Gln785*)突变,考虑在胚胎发育阶段出现生殖细胞嵌合突变可能。诊断为AML合并TSC。给予患者mTOR抑制剂依维莫司治疗1年,经复查患者肾多发AML病灶较前显著缩小,疗效达到部分缓解。结论AML患者需警惕是否合并TSC。诊断TSC时,低丰度的胚系突变需深入分析。mTOR抑制剂可作为TSC-AML患者治疗的选择。 展开更多
关键词 血管平滑肌脂肪瘤 结节性硬化症 嵌和突变
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多梳抑制性去泛素化酶复合物的结构与功能及其在血液肿瘤发生发展中的作用
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作者 张文文 蒋福全 陈振华 《中国生物化学与分子生物学报》 CAS CSCD 北大核心 2024年第7期879-888,共10页
多梳抑制性去泛素化酶(polycomb repressive deubiquitinase,PR-DUB)复合物是多梳蛋白家族的成员之一,通过调节组蛋白修饰参与染色体的表观遗传修饰。多梳抑制性复合物1(polycomb repressive complex 1,PRC1)和PR-DUB复合物通过对H2AK11... 多梳抑制性去泛素化酶(polycomb repressive deubiquitinase,PR-DUB)复合物是多梳蛋白家族的成员之一,通过调节组蛋白修饰参与染色体的表观遗传修饰。多梳抑制性复合物1(polycomb repressive complex 1,PRC1)和PR-DUB复合物通过对H2AK119Ub泛素化与去泛素化修饰调控平衡,保护活性基因免受异常沉默,去泛素化功能与促进基因活化和建立转录允许的染色质状态有关,除此之外还激活增强子并促进双链断裂处DNA损伤修复。附加性梳样1(additional sex comb-like1,ASXL1)作为表观遗传支架组装染色质修饰复合物和转录因子参与表观遗传调控。BRCA1相关蛋白1(BRCA1-associated protein 1,BAP1)作为去泛素化酶去除底物的泛素化修饰。PR-DUB复合物由核心二聚体和其他辅助因子组成,BAP1与ASXL1形成核心二聚体,其他亚基相互作用调节PR-DUB复合物靶向和功能。ASXL1和BAP1是与PR-DUB复合物去泛素化功能最相关的2个亚基,ASXL1的DEUBAD结构域激活BAP1发挥去泛素化作用水解H2AK119Ub1。了解ASXL1和BAP1的结构以及相互作用机制对研究PR-DUB复合物特异性去泛素化作用的机制至关重要。在人类中,PR-DUB复合物成分的突变经常引起多种血液肿瘤。ASXL 1基因突变常导致蛋白质翻译提前结束,大部分是由于C末端PHD结构域缺失导致。目前认为,PR-DUB复合物中突变的ASXL1或BAP1、表观遗传因子以及Akt/mTOR等靶点或信号通路相互作用是促进血液肿瘤发生发展的可能机制。这对于针对潜在的治疗靶点研究开发新的特异性靶向治疗药物至关重要。本文将介绍PR-DUB复合物的结构与功能、作用机制及其在血液肿瘤疾病中的发生,重点就ASXL1和BAP1进行综述,并系统总结了潜在的靶向治疗药物,以期为PR-DUB复合物在血液疾病防治中的研究提供科学参考。 展开更多
关键词 多梳抑制性去泛素化酶复合物 去泛素化修饰 基因突变 血液肿瘤
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复杂山区铁路隧道勘察设计工程质量风险识别及耦合演化分析
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作者 王晨 王卫东 李艳鸽 《铁道科学与工程学报》 EI CAS CSCD 北大核心 2024年第8期3335-3346,共12页
铁路隧道工程勘察设计阶段工作对整个工程的全生命周期质量具有重要影响。然而,山区地质条件复杂、自然灾害频发等特点给铁路隧道勘察设计带来极大挑战,而且铁路工程质量风险构成复杂,风险事件的发生通常是多风险耦合作用的结果。目前... 铁路隧道工程勘察设计阶段工作对整个工程的全生命周期质量具有重要影响。然而,山区地质条件复杂、自然灾害频发等特点给铁路隧道勘察设计带来极大挑战,而且铁路工程质量风险构成复杂,风险事件的发生通常是多风险耦合作用的结果。目前关于铁路隧道的研究多聚焦于隧道的关键技术、施工安全、绿色性能等方面,鲜有立足勘察设计阶段的山区铁路隧道质量风险耦合研究。为从勘察设计阶段提高隧道工程质量目标的成效,提出基于突变理论的质量风险耦合效应分析模型。首先从内部诱因(人员、技术、管理)和外部诱因(地质、社会、自然)2个维度辨识影响复杂山区铁路隧道勘察设计的质量风险源,并结合改进重要性-绩效分析法(IPA)对风险因子进行层级归类;其次分析多风险因素耦合的形成机理,基于突变理论从耦合度和稳定性2个方面分析铁路隧道勘察设计工程质量风险耦合效应,并构建尖点突变模型进行风险耦合路径演化分析;最后以某复杂山区铁路隧道为例,利用提出的方法进行验证,确定其风险耦合等级为Ⅲ级,存在高风险的耦合程度,质量风险需要警惕,但整体系统处于稳定状态。该研究可以为复杂山区铁路隧道勘察设计工程质量风险决策提供理论支撑。 展开更多
关键词 复杂山区铁路隧道 勘察设计 质量风险耦合 突变理论 改进重要性-绩效分析法(IPA)
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不明原因复发性流产中aPS/PT IgM/IgG、anti-MCV、α-fodrin的表达及药物干预的妊娠结局分析
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作者 李明蔧 周梦思 +3 位作者 郭婷婷 贾澜澜 佟雨桐 杨小风 《临床和实验医学杂志》 2024年第19期2082-2085,共4页
目的检测不明原因复发性流产(URSA)患者血清抗磷脂酰丝氨酸凝血酶原复合物(aPS/PT)、抗突变瓜氨酸波形蛋白抗体(anti-MCV)、α-胞衬蛋白抗体(α-fodrin)的表达情况,探究其与URSA的关系。并探讨羟氯喹在抗体表达阳性患者中的应用疗效。... 目的检测不明原因复发性流产(URSA)患者血清抗磷脂酰丝氨酸凝血酶原复合物(aPS/PT)、抗突变瓜氨酸波形蛋白抗体(anti-MCV)、α-胞衬蛋白抗体(α-fodrin)的表达情况,探究其与URSA的关系。并探讨羟氯喹在抗体表达阳性患者中的应用疗效。方法回顾性选取2018年11月至2022年4月郑州大学附属郑州中心医院收治的596例URSA患者作为研究组,以同期在本院体检的无不良孕产史且已正常生育的健康女性80名为对照组。采用酶联免疫吸附试验法检测两组血清aPS/PT IgG/IgM、anti-MCV及α-fodrin表达水平,并比较两组血清aPS/PT IgG/IgM、anti-MCV及α-fodrin的表达情况。对研究组aPS/PT IgM/IgG、anti-MCV、α-fodrin血清学检测阳性的111例患者进行药物干预。随访14例失访,余下97例患者中,85例自愿接受药物干预,12例拒绝药物治疗,根据其意愿分为治疗A组(n=42),治疗B组(n=43)及未治疗组(n=12)。比较治疗A组、治疗B组与未治疗组的妊娠成功率。结果研究组aPS/PT IgM、aPS/PT IgG、anti-MCV及α-fodrin表达率分别为7.38%、0.50%、7.21%、5.03%,对照组分别为0、0、0、0.12%,研究组血清aPS/PT IgM、anti-MCV表达率均显著高于对照组,差异均有统计学意义(P<0.05);两组aPS/PT IgG、α-fodrin比较,差异均无统计学意义(P>0.05)。治疗A组、治疗B组妊娠率分别为66.67%、88.37%,明显高于未治疗组(25.00%),治疗B组患者妊娠成功率明显高于治疗A组,差异均有统计学意义(P<0.05)。结论URSA患者中aPS/PT IgM及anti-MCV二者异常高表达是URSA发生的危险因素。对于aPS/PT IgG/IgM、anti-MCV、α-fodrin阳性的URSA患者,羟氯喹联合低剂量阿司匹林及低分子肝素治疗可明显改善妊娠结局。 展开更多
关键词 妊娠结局 阿司匹林 羟氯喹 不明原因复发性流产 抗磷脂酰丝氨酸凝血酶原复合物 抗突变瓜氨酸波形蛋白抗体 α-胞衬蛋白抗体 低分子肝素
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集成自适应变异混沌松鼠搜索和LSTM算法的RUL预测方法及应用 被引量:4
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作者 何静 高见 张昌凡 《电子测量与仪器学报》 CSCD 北大核心 2023年第5期88-97,共10页
针对松鼠搜索算法(SSA)优化长短期记忆人工神经网络(LSTM)时,存在优化参数易陷入局部最优以及LSTM预测效率下降的问题,提出一种自适应变异混沌松鼠搜索算法(AMCSSA)优化LSTM学习率及其下降因子的预测模型。通过计算AMCSSA的时间复杂度... 针对松鼠搜索算法(SSA)优化长短期记忆人工神经网络(LSTM)时,存在优化参数易陷入局部最优以及LSTM预测效率下降的问题,提出一种自适应变异混沌松鼠搜索算法(AMCSSA)优化LSTM学习率及其下降因子的预测模型。通过计算AMCSSA的时间复杂度证明其在未增加算法复杂度的前提下提高寻优效率,AMCSSA采用切比雪夫混沌映射生成混沌初始种群,并将捕食者概率改为非线性递减模式,利用位置贪婪选择策略使其在算法迭代过程中不断更新并保留更优个体,引入自适应T变异策略提高SSA在搜索空间中的勘探能力。通过AMCSSA对LSTM的学习率及其下降因子进行参数寻优,进一步提高LSTM的预测能力。对滚动轴承的剩余使用寿命(RUL)进行实验验证,结果表明所提方法相较于传统SSA、粒子群算法(PSO)、蝙蝠算法(BAT)以及萤火虫算法(FA)优化LSTM后,在预测中的精度分别提高了1.05%、7.61%、8.4%以及7.73%,并且使优化后的LSTM在完成收敛所需要的迭代次数减少,从而提高预测效率。 展开更多
关键词 松鼠搜索算法 长短期记忆人工神经网络 切比雪夫混沌映射 自适应T变异 时间复杂度 剩余使用寿命
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基于复杂网络的合成致死预测方法研究综述 被引量:1
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作者 刘闯 舒胜利 +1 位作者 詹秀秀 张子柯 《计算机学报》 EI CAS CSCD 北大核心 2023年第8期1670-1692,共23页
合成致死(Synthetic Lethality,SL)是一种负遗传相互作用,描述的是两个非必要基因之间的相互关系:其中任何一个基因的突变对细胞存活的影响很小,但两个基因的共同突变会导致细胞死亡或其他有碍细胞存活的表型.SL对于解释复杂生物过程、... 合成致死(Synthetic Lethality,SL)是一种负遗传相互作用,描述的是两个非必要基因之间的相互关系:其中任何一个基因的突变对细胞存活的影响很小,但两个基因的共同突变会导致细胞死亡或其他有碍细胞存活的表型.SL对于解释复杂生物过程、推动癌症的临床诊治有着重要的意义.因此,利用海量的高通量数据,通过构建数据分析模型和计算方法,从计算的角度进行SL对的挖掘和预测,是计算生物学研究的一个重要方向.本文首先对于SL预测所使用的相关数据进行了详细的综述,然后从生物网络这一全新视角出发,重点讨论了基于网络分析的SL预测方法.从网络上的统计学方法、基于网络结构变化的方法、基于网络特征学习的方法、基于图表示学习的方法四个方面综述了相关预测模型和研究的最新进展,详细地比较了各类方法的算法思路、应用场景和优缺点,最后针对SL预测的结果评估和验证方法的研究进展进行了论述.在此基础上,论文进一步总结出SL预测研究中所面临的几项挑战,并针对性的对未来发展方向进行展望,希望为今后的相关研究提供一些有用的参考和思路. 展开更多
关键词 合成致死 复杂网络 基因突变 机器学习 预测方法
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SWI/SNF复合体基因突变促进NSCLC细胞在NSI小鼠体内肝转移的研究
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作者 高玲玲 谢至 +14 位作者 林首恒 吕志异 周文斌 陈冀 朱琳琳 张莉 曾鹏辉 黄晓丹 颜文青 陈宇 卢丹霞 张水莲 郭伟浜 李鹏 张绪超 《中国肺癌杂志》 CAS CSCD 北大核心 2023年第10期753-764,共12页
背景与目的SWI/SNF复合体(switch/sucrose nonfermentable chromatin-remodeling complex,SWI/SNF)是一种重要的染色质重塑复合物,其亚基变异在多种肿瘤中存在,并与多种肿瘤细胞生物学特征相关。但其基因突变是否参与非小细胞肺癌(non-s... 背景与目的SWI/SNF复合体(switch/sucrose nonfermentable chromatin-remodeling complex,SWI/SNF)是一种重要的染色质重塑复合物,其亚基变异在多种肿瘤中存在,并与多种肿瘤细胞生物学特征相关。但其基因突变是否参与非小细胞肺癌(non-small cell lung cancer,NSCLC)肝转移过程尚不清楚。本研究拟探究SWI/SNF复合体基因突变对NSCLC肝转移的影响及潜在机制。方法我们使用全外显子组测序(whole-exome sequencing,WES)分析了NSCLC细胞H1299、H23和H460中SWI/SNF复合体基因突变。通过CRISPR/Cas9(clustered regularly interspaced short palindromic repeats)技术构建了ARID1A基因稳定敲除的H1299细胞株,建立了小鼠模型模拟NSCLC肝转移,观察不同基因突变对肝转移的影响。利用RNA-Seq和蛋白印迹分析差异基因的表达,并通过免疫组化技术(immunohistochemistry,IHC)检测了SWI/SNF复合体调控的靶分子在小鼠肝转移灶中的表达。结果WES分析确定了SWI/SNF复合体基因的突变情况。动物实验结果显示SWI/SNF复合体基因突变与免疫缺陷小鼠较高的肝转移率相关。转录组测序和蛋白印迹分析显示SWI/SNF复合体基因突变细胞中ALDH1A1和APOBEC3B表达上调,尤其是ARID1A蛋白缺失的H460和H1299 sgARID1A中ALDH1A1表达水平显著上升。IHC染色亦显示H460和H1299 sgARID1A细胞肝转移灶中ALDH1A1高表达。结论本研究强调了SWI/SNF复合体基因ARID1A和SMARCA4等突变在促进肺癌细胞肝转移中的关键作用。这些基因突变可能通过促进ALDH1A1与APOBEC3B高表达进而发挥肝特异性转移的作用,为深入探究肺癌肝转移分子机制提供了新线索。 展开更多
关键词 肺肿瘤 SWI/SNF复合体 突变 肿瘤转移
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EGFR基因突变非小细胞肺癌患者临床特征及酪氨酸激酶抑制剂疗效分析
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作者 杜迪 栗静 +1 位作者 程烨 戴助 《中国药业》 CAS 2023年第14期108-112,共5页
目的分析非小细胞肺癌(NSCLC)患者表皮生长因子受体(EGFR)基因突变类型及不同酪氨酸激酶抑制剂(TKI)治疗与疗效的相关性。方法选取医院2020年1月至10月收治的NSCLC患者273例,统计其临床特征并进行相关性分析,接受TKI一线治疗的99例患者... 目的分析非小细胞肺癌(NSCLC)患者表皮生长因子受体(EGFR)基因突变类型及不同酪氨酸激酶抑制剂(TKI)治疗与疗效的相关性。方法选取医院2020年1月至10月收治的NSCLC患者273例,统计其临床特征并进行相关性分析,接受TKI一线治疗的99例患者按突变类型和治疗方案的不同分别记录无进展生存期,并随访至2021年5月31日或发生疾病进展(以先发生者为准)。结果共156例(57.1%)患者检测到20种突变,其中常见单点突变124例(E21 L858R 37例,E19 DEL 87例),少见单点突变10例,复合突变14例,共突变8例。E19 DEL突变与女性(P=0.011)、无吸烟史(P=0.008)、腺癌(P=0.003)、肿瘤分期为Ⅳ期(P=0.007)、存在淋巴结转移(P=0.033)、存在远处转移(P=0.035)显著相关;E21 L858R突变与腺癌显著相关(P=0.006);Ⅳ期(P=0.013,P=0.003)和远处转移(P=0.029,P=0.040)与共突变和TKI一线治疗后E20 T790M突变显著相关。接受TKI一线治疗患者的无进展生存期与EGFR基因突变类型(P=0.988)或一线用药选择(P=0.040)均无显著相关性。结论EGFR基因单点突变与女性、无吸烟史、腺癌、Ⅳ期和远处转移相关,Ⅳ期和远处转移患者中更多见共突变及治疗后E20 T790M突变,一线疗效与EGFR基因突变类型或TKI药物选择均无相关性。 展开更多
关键词 非小细胞肺癌 表皮生长因子受体 基因突变 复合突变 共突变 酪氨酸激酶抑制剂 临床疗效
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A Chinese Tuberous Sclerosis Complex Family and a Novel Tuberous Sclerosis Complex-2 Mutation 被引量:3
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作者 Rong Luo Qianyun Cai Dezhi Mu 《Chinese Medical Journal》 SCIE CAS CSCD 2015年第1期128-130,共3页
Tuberous sclerosis complex (TSC) is a relatively common autosomal dominant genetic disorder affecting l/14,000-1/6000 Western populations.The incidence of TSC in Chinese population is still unknown although case rep... Tuberous sclerosis complex (TSC) is a relatively common autosomal dominant genetic disorder affecting l/14,000-1/6000 Western populations.The incidence of TSC in Chinese population is still unknown although case reports of Chinese TSC patients were documented. The main clinical features of TSC include seizures,mental retardation,and the development ofhamartomas in multiple organs such as the skin,brain,lung,heart,and kidney.Indeed,the disease virtually manifests in every organ. Two causative genes for TSC,TSC 1 gene on chromosome 9q34 and TSC2 gene on chromosome16p13,have been identified in 1997 and 1993 respectively.Approximately,70% of cases of TSC are de novo mutations. Chinese TSC patients are more likely to have TSC2 missense and frame shift mutations.Here,we record one Chinese TSC family and it is novel frame shift mutation of TSC2. 展开更多
关键词 Tuberous Sclerosis complex Gene mutation TSC2
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复杂约束下单集装箱装载问题的改进元启发式算法 被引量:1
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作者 刘日鑫 秦威 许鸿伟 《计算机科学》 CSCD 北大核心 2023年第S02期21-30,共10页
三维单集装箱装载问题(Three-dimensional Single Container Loading Problem,3D-SCLP)因其在制造业和物流业中有着广泛的应用,已成为最优化领域中最经典的工程问题之一。然而,目前的优化方案主要从算法优化改进与局部约束调整等角度考... 三维单集装箱装载问题(Three-dimensional Single Container Loading Problem,3D-SCLP)因其在制造业和物流业中有着广泛的应用,已成为最优化领域中最经典的工程问题之一。然而,目前的优化方案主要从算法优化改进与局部约束调整等角度考虑,没有充分考虑实际装载过程中的复杂约束需求,如重量限制、负载平衡、货物稳定性、堆叠约束以及人因工程因素,导致现有方法理论装载率虽高,但实用性低。在充分考虑实际多重复杂约束的基础上,提出了一种基于天鹰座优化器的改进元启发式算法。该算法基于种群优化策略,并将差分变异和高斯扰动与潜在点策略相结合,实现复杂约束情况下的快速收敛。在中等规模工业实例数据上进行了算法验证,与传统启发式优化方法相比,所提方法能够解决中等规模复杂约束下的三维装箱优化问题,在实际空间利用率、生成效率等方面优于现有的解决方案。对物流运输行业减少人工成本,实现装箱标准化与智能化具有重要意义。 展开更多
关键词 三维单集装箱装载问题 复杂约束 天鹰座优化器 高斯扰动 差分变异
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