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Application of near-infrared spectroscopy for fast germplasm analysis and classification in multi-environment using intact-seed peanut(Arachis hypogaea L.)
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作者 Fentanesh Chekole Kassie Gilles Chaix +10 位作者 Hermine Bille Ngalle Maguette Seye Coura Fall Hodo-Abalo Tossim Aissatou Sambou Olivier Gibert Fabrice Davrieux Joseph Martin Bell Jean-Francois Rami Daniel Fonceka Joel Romaric Nguepjop 《Oil Crop Science》 CSCD 2024年第2期132-141,共10页
Peanut is a worldwide oilseed crop and the need to assess germplasm in a non-destructive manner is important for seed nutritional breeding.In this study,Near Infrared Spectroscopy(NIRS)was applied to rapidly assess ge... Peanut is a worldwide oilseed crop and the need to assess germplasm in a non-destructive manner is important for seed nutritional breeding.In this study,Near Infrared Spectroscopy(NIRS)was applied to rapidly assess germplasm variability from whole seed of 699 samples,field-collected and assembled in four genetic and environmentbased sets:one set of 300 varieties of a core-collection and three sets of 133 genotypes of an interspecific population,evaluated in three environments in a large spatial scale of two countries,Mbalmayo and Bafia in Cameroon and Nioro in Senegal,under rainfed conditions.NIR elemental spectra were gathered on six subsets of seeds of each sample,after three rotation scans,with a spectral resolution of 16 cm-1over the spectral range of867 nm to 2530 nm.Spectra were then processed by principal component analysis(PCA)coupled with Partial least squares-discriminant analysis(PLS-DA).As results,a huge variability was found between varieties and genotypes for all NIR wavelength within and between environments.The magnitude of genetic variation was particularly observed at 11 relevant wavelengths such as 1723 nm,usually related to oil content and fatty acid composition.PCA yielded the most chemical attributes in three significant PCs(i.e.,eigenvalues>10),which together captured 93%of the total variation,revealing genetic and environment structure of varieties and genotypes into four clusters,corresponding to the four samples sets.The pattern of genetic variability of the interspecific population covers,remarkably half of spectrum of the core-collection,turning out to be the largest.Interestingly,a PLS-DA model was developed and a strong accuracy of 99.6%was achieved for the four sets,aiming to classify each seed sample according to environment origin.The confusion matrix achieved for the two sets of Bafia and Nioro showed 100%of instances classified correctly with 100%at both sensitivity and specificity,confirming that their seed quality was different from each other and all other samples.Overall,NIRS chemometrics is useful to assess and distinguish seeds from different environments and highlights the value of the interspecific population and core-collection,as a source of nutritional diversity,to support the breeding efforts. 展开更多
关键词 GROUNDNUT OILSEED near infrared spectroscopy Germplasm analysis ENVIRONMENT NUTRITIONAL Breeding
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Near Infrared Spectroscopy (NIRS) Model-Based Prediction for Protein Content in Cowpea
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作者 Kavera Biradar Waltram Ravelombola +1 位作者 Aurora Manley Caroline Ruhl 《American Journal of Plant Sciences》 CAS 2024年第3期145-160,共16页
Cowpea (Vigna unguiculata L. Walp) is a multi-purpose legume with high quality protein for human consumption and livestock. The objective of this work was to develop near-infrared spectroscopy (NIRS) prediction models... Cowpea (Vigna unguiculata L. Walp) is a multi-purpose legume with high quality protein for human consumption and livestock. The objective of this work was to develop near-infrared spectroscopy (NIRS) prediction models to estimate protein content in cowpea. A total of 116 cowpea breeding lines with a wide range of protein contents (19.28 % to 32.04%) were selected to build the model using whole seed and ground seed samples. Partial least-squares discriminant analysis (PLS-DA) regression technique with different pre-treatments (derivatives, standard normal variate, and multiplicative scatter correction) were carried out to develop the protein prediction model. Results showed: 1) spectral plots of both the whole seed and ground seed showed higher spectral scatter at higher wavelengths (>1450 nm), 2) data pre-processing affects prediction accuracy for bot whole seed and ground seed samples, 3) prediction using ground seed samples (0.64 R<sup>2</sup> 0.85) is better than the whole seed (0.33 R<sup>2</sup> 0.78), and 4) the data pre-processing second derivative with standard normal variate has the best prediction (R<sup>2</sup>_whole seed = 0.78, R<sup>2</sup>_ground seed = 0.85). The results will be of interest in cowpea breeding programs aimed at improving total seed protein content. 展开更多
关键词 COWPEA GERMPLASM PROTEIN near-infrared spectroscopy (NIRS) Partial Least Squares (PLS)
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Functional near-infrared spectroscopy in non-invasive neuromodulation 被引量:1
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作者 Congcong Huo Gongcheng Xu +6 位作者 Hui Xie Tiandi Chen Guangjian Shao Jue Wang Wenhao Li Daifa Wang Zengyong Li 《Neural Regeneration Research》 SCIE CAS CSCD 2024年第7期1517-1522,共6页
Non-invasive cerebral neuromodulation technologies are essential for the reorganization of cerebral neural networks,which have been widely applied in the field of central neurological diseases,such as stroke,Parkinson... Non-invasive cerebral neuromodulation technologies are essential for the reorganization of cerebral neural networks,which have been widely applied in the field of central neurological diseases,such as stroke,Parkinson’s disease,and mental disorders.Although significant advances have been made in neuromodulation technologies,the identification of optimal neurostimulation paramete rs including the co rtical target,duration,and inhibition or excitation pattern is still limited due to the lack of guidance for neural circuits.Moreove r,the neural mechanism unde rlying neuromodulation for improved behavioral performance remains poorly understood.Recently,advancements in neuroimaging have provided insight into neuromodulation techniques.Functional near-infrared spectroscopy,as a novel non-invasive optical brain imaging method,can detect brain activity by measuring cerebral hemodynamics with the advantages of portability,high motion tole rance,and anti-electromagnetic interference.Coupling functional near-infra red spectroscopy with neuromodulation technologies offe rs an opportunity to monitor the cortical response,provide realtime feedbac k,and establish a closed-loop strategy integrating evaluation,feedbac k,and intervention for neurostimulation,which provides a theoretical basis for development of individualized precise neuro rehabilitation.We aimed to summarize the advantages of functional near-infra red spectroscopy and provide an ove rview of the current research on functional near-infrared spectroscopy in transcranial magnetic stimulation,transcranial electrical stimulation,neurofeedback,and braincomputer interfaces.Furthermore,the future perspectives and directions for the application of functional near-infrared spectroscopy in neuromodulation are summarized.In conclusion,functional near-infrared spectroscopy combined with neuromodulation may promote the optimization of central pellral reorganization to achieve better functional recovery form central nervous system diseases. 展开更多
关键词 brain-computer interface cerebral neural networks functional near-infrared spectroscopy neural circuit NEUROFEEDBACK neurological diseases NEUROMODULATION non-invasive brain stimulation transcranial electrical stimulation transcranial electrical stimulation
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Spatial sensitivity to absorption changes for various near-infrared spectroscopy methods:A compendium review
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作者 Giles Blaney Angelo Sassaroli Sergio Fantini 《Journal of Innovative Optical Health Sciences》 SCIE EI CSCD 2024年第4期1-115,共115页
This compendium review focuses on the spatial distribution of sensitivity to localized absorption changes in optically diffuse media,particularly for measurements relevant to near-infrared spectroscopy.The three tempo... This compendium review focuses on the spatial distribution of sensitivity to localized absorption changes in optically diffuse media,particularly for measurements relevant to near-infrared spectroscopy.The three temporal domains,continuous wave,frequency domain,and time domain,each obtain different optical data types whose changes may be related to effective homogeneous changes in the absorption coefficient.Sensitivity is the relationship between a localized perturbation and the recovered effective homogeneous absorption change.Therefore,spatial sensitivity maps representing the perturbation location can be generated for the numerous optical data types in the three temporal domains.The review first presents a history of the past 30 years of work investigating this sensitivity in optically diffuse media.These works are experimental and theoretical,presenting one-,two-,and three-dimensional sensitivity maps for different Near-Infrared Spectroscopy methods,domains,and data types.Following this history,we present a compendium of sensitivity maps organized by temporal domain and then data type.This compendium provides a valuable tool to compare the spatial sensitivity of various measurement methods and parameters in one document.Methods for one to generate these maps are provided in Appendix A,including the code.This historical review and comprehensive sensitivity map compendium provides a single source researchers may use to visualize,investigate,compare,and generate sensitivity to localized absorption change maps. 展开更多
关键词 Diffuse optics diffusion theory Monte Carlo spatial sensitivity absorption perturbations near-infrared spectroscopy CONTINUOUS-WAVE FREQUENCY-DOMAIN time-domain
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Cortical activity in patients with high-functioning ischemic stroke during the Purdue Pegboard Test:insights into bimanual coordinated fine motor skills with functional near-infrared spectroscopy
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作者 Siyun Chen Mengchai Mao +4 位作者 Guangyue Zhu Yufeng Chen Yuqi Qiu Bin Ye Dongsheng Xu 《Neural Regeneration Research》 SCIE CAS CSCD 2024年第5期1098-1104,共7页
After stroke,even high-functioning individuals may experience compromised bimanual coordination and fine motor dexterity,leading to reduced functional independence.Bilateral arm training has been proposed as a promisi... After stroke,even high-functioning individuals may experience compromised bimanual coordination and fine motor dexterity,leading to reduced functional independence.Bilateral arm training has been proposed as a promising intervention to address these deficits.However,the neural basis of the impairment of functional fine motor skills and their relationship to bimanual coordination performance in stroke patients remains unclear,limiting the development of more targeted interventions.To address this gap,our study employed functional near-infrared spectroscopy to investigate cortical responses in patients after stroke as they perform functional tasks that engage fine motor control and coordination.Twenty-four high-functioning patients with ischemic stroke(7 women,17 men;mean age 64.75±10.84 years)participated in this cross-sectional observational study and completed four subtasks from the Purdue Pegboard Test,which measures unimanual and bimanual finger and hand dexterity.We found significant bilateral activation of the sensorimotor cortices during all Purdue Pegboard Test subtasks,with bimanual tasks inducing higher cortical activation than the assembly subtask.Importantly,patients with better bimanual coordination exhibited lower cortical activation during the other three Purdue Pegboard Test subtasks.Notably,the observed neural response patterns varied depending on the specific subtask.In the unaffected hand task,the differences were primarily observed in the ipsilesional hemisphere.In contrast,the bilateral sensorimotor cortices and the contralesional hemisphere played a more prominent role in the bimanual task and assembly task,respectively.While significant correlations were found between cortical activation and unimanual tasks,no significant correlations were observed with bimanual tasks.This study provides insights into the neural basis of bimanual coordination and fine motor skills in high-functioning patients after stroke,highlighting task-dependent neural responses.The findings also suggest that patients who exhibit better bimanual performance demonstrate more efficient cortical activation.Therefore,incorporating bilateral arm training in post-stroke rehabilitation is important for better outcomes.The combination of functional near-infrared spectroscopy with functional motor paradigms is valuable for assessing skills and developing targeted interventions in stroke rehabilitation. 展开更多
关键词 bilateral arm training bimanual coordination cortical activity fine motor dexterity functional near-infrared spectroscopy(fNIRS) high-functioning Purdue Pegboard Test stroke
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Noninvasive Detection of Cerebral Blood Flow and Blood Oxygen Based on Inductive Sensing Technology and Near Infrared Spectroscopy
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作者 Cheng Zhou Zexiang Lyu +6 位作者 Maoting Zhang Xin Zou Liang Wei Feng Wang Mingxin Qin Jia Xu Jian Sun 《Journal of Beijing Institute of Technology》 EI CAS 2024年第3期204-212,共9页
The synchronous monitoring of cerebral blood flow and blood oxygen levels plays a pivotal role in the prevention,diagnosis,and treatment of cerebrovascular diseases.This study introduces a novel noninvasive device uti... The synchronous monitoring of cerebral blood flow and blood oxygen levels plays a pivotal role in the prevention,diagnosis,and treatment of cerebrovascular diseases.This study introduces a novel noninvasive device utilizing inductive sensing and near-infrared spectroscopy technology to facilitate simultaneous monitoring of cerebral blood flow and blood oxygen levels.The device consists of modules for cerebral blood flow monitoring,cerebral blood oxygen monitoring,control,communication,and a host machine.Through experiments conducted on healthy subjects,it was confirmed that the device can effectively achieve synchronous monitoring and recording of cerebral blood flow and blood oxygen signals.The results demonstrate the device’s capability to accurately measure these signals simultaneously.This technology enables dynamic monitoring of cerebral blood flow and blood oxygen signals with potential clinical applications in preventing,diagnosing,treating cerebrovascular diseases while reducing their associated harm. 展开更多
关键词 cerebrovascular disease synchronous monitoring inductive sensing near infrared spec-troscopy(NIRS)
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Strength prediction model for water-bearing sandstone based on nearinfrared spectroscopy 被引量:1
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作者 ZHANG Xiu-lian ZHANG Fang +2 位作者 WANG Ya-zhe TAO Zhi-gang ZHANG Xiao-yun 《Journal of Mountain Science》 SCIE CSCD 2023年第8期2388-2404,共17页
The strength of water-bearing rock cannot be obtained in real time and by nondestructive experiments,which is an issue at cultural relics protection sites such as grotto temples.To solve this problem,we conducted a ne... The strength of water-bearing rock cannot be obtained in real time and by nondestructive experiments,which is an issue at cultural relics protection sites such as grotto temples.To solve this problem,we conducted a near-infrared spectrum acquisition experiment in the field and laboratory uniaxial compression strength tests on sandstone that had different water saturation levels.The correlations between the peak height and peak area of the nearinfrared absorption bands of the water-bearing sandstone and uniaxial compressive strength were analyzed.On this basis,a strength prediction model for water-bearing sandstone was established using the long short-term memory full convolutional network(LSTM-FCN)method.Subsequently,a field engineering test was carried out.The results showed that:(1)The sandstone samples had four distinct characteristic absorption peaks at 1400,1900,2200,and 2325 nm.The peak height and peak area of the absorption bands near 1400 nm and 1900 nm had a negative correlation with uniaxial compressive strength.The peak height and peak area of the absorption bands near 2200 nm and 2325 nm had nonlinear positive correlations with uniaxial compressive strength.(2)The LSTM-FCN method was used to establish a strength prediction model for water-bearing sandstone based on near-infrared spectroscopy,and the model achieved an accuracy of up to 97.52%.(3)The prediction model was used to realize non-destructive,quantitative,and real-time determination of uniaxial compressive strength;this represents a new method for the non-destructive testing of grotto rock mass at sites of cultural relics protection. 展开更多
关键词 Water-bearing sandstone near-infrared spectroscopy Saturation degree Uniaxial compressive strength Prediction model Dazu Rock Carvings
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Synchronous measurements of prefrontal activity and pulse rate variability during online video game playing with functional near-infrared spectroscopy 被引量:1
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作者 Xuzhe Zhang Kehong Long +2 位作者 Ningxin Wang Jin Zhang Hao Lei 《Journal of Innovative Optical Health Sciences》 SCIE EI CSCD 2023年第6期53-67,共15页
Interactions between the central nervous system(CNS)and autonomic nervous system(ANS)play a crucial role in modulating perception,cognition,and emotion production.Previous studies on CNS–ANS interactions,or heart–br... Interactions between the central nervous system(CNS)and autonomic nervous system(ANS)play a crucial role in modulating perception,cognition,and emotion production.Previous studies on CNS–ANS interactions,or heart–brain coupling,have often used heart rate variability(HRV)metrics derived from electrocardiography(ECG)recordings as empirical measurements of sympathetic and parasympathetic activities.Functional near-infrared spectroscopy(fNIRS)is a functional brain imaging modality that is increasingly used in brain and cognition studies.The fNIRS signals contain frequency bands representing both neural activity oscillations and heartbeat rhythms.Therefore,fNIRS data acquired in neuroimaging studies can potentially provide a single-modality approach to measure task-induced responses in the brain and ANS synchronously,allowing analysis of CNS–ANS interactions.In this proof-of-concept study,fNIRS was used to record hemodynamic changes from the foreheads of 20 university students as they each played a round of multiplayer online battle arena(MOBA)game.From the fNIRS recordings,neural and heartbeat frequency bands were extracted to assess prefrontal activities and shortterm pulse rate variability(PRV),an approximation for short-term HRV,respectively.Under the experimental conditions used,fNIRS-derived PRV metrics showed good correlations with ECG-derived HRV golden standards,in terms of absolute measurements and video game playing(VGP)-related changes.It was also observed that,similar to previous studies on physical activity and exercise,the PRV metrics closely related to parasympathetic activities recovered slower than the PRV indicators of sympathetic activities after VGP.It is concluded that it is feasible to use fNIRS to monitor concurrent brain and ANS activations during online VGP,facilitating the understanding of VGP-related heart–brain coupling. 展开更多
关键词 Heart rate variability pulse rate variability functional near-infrared spectroscopy video game prefrontal cortex heart–brain coupling
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Near-infrared spectroscopy method for rapid proximate quantitative analysis of nutrient composition in Pacific oyster Crassostrea gigas 被引量:1
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作者 Zhe LI Haigang QI +4 位作者 Ying YU Cong LIU Rihao CONG Li LI Guofan ZHANG 《Journal of Oceanology and Limnology》 SCIE CAS CSCD 2023年第1期342-351,共10页
Glycogen,amino acids,fatty acids,and other nutrient components affect the flavor and nutritional quality of oysters.Methods based on near-infrared reflectance spectroscopy(NIRS)were developed to rapidly and proximatel... Glycogen,amino acids,fatty acids,and other nutrient components affect the flavor and nutritional quality of oysters.Methods based on near-infrared reflectance spectroscopy(NIRS)were developed to rapidly and proximately determine the nutrient content of the Pacific oyster Crassostreagigas.Samples of C.gigas from 19 costal sites were freeze-dried,ground,and scanned for spectral data collection using a Fourier transform NIR spectrometer(Thermo Fisher Scientific).NIRS models of glycogen and other nutrients were established using partial least squares,multiplication scattering correction first-order derivation,and Norris smoothing.The R_(C) values of the glycogen,fatty acids,amino acids,and taurine NIRS models were 0.9678,0.9312,0.9132,and 0.8928,respectively,and the residual prediction deviation(RPD)values of these components were 3.15,2.16,3.11,and 1.59,respectively,indicating a high correlation between the predicted and observed values,and that the models can be used in practice.The models were used to evaluate the nutrient compositions of 1278 oyster samples.Glycogen content was found to be positively correlated with fatty acids and negatively correlated with amino acids.The glycogen,amino acid,and taurine levels of C.gigas cultured in the subtidal and intertidal zones were also significantly different.This study suggests that C.gigas NIRS models can be a cost-effective alternative to traditional methods for the rapid and proximate analysis of various slaughter traits and may also contribute to future genetic and breeding-related studies in Pacific oysters. 展开更多
关键词 Pacific oyster Crassostrea gigas near-infrared reflectance spectroscopy(NIRS) nutrient composition rapid determination
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Determination of Melamine by Infrared Spectroscopy Based on Nonlinear Modeling 被引量:1
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作者 张恒 高曼侠 +2 位作者 许兆棠 李文谦 王琪 《Agricultural Science & Technology》 CAS 2010年第8期133-136,共4页
[Objective] The aim was to develop a nonlinear model of quantitative analysis of melamine content by infrared spectroscopy and provide theoretical basis for the nondestructive detection of melamine. [Method] According... [Objective] The aim was to develop a nonlinear model of quantitative analysis of melamine content by infrared spectroscopy and provide theoretical basis for the nondestructive detection of melamine. [Method] According to dynamics,mathematical modeling and optimization theory,linear and nonlinear models were respectively set up by taking an absorption peak of 1 550 cm-1 as characteristic absorption peak. [Result] The correlation coefficient of nonlinear model was 0.922 7 and the recovery was 96%,which showed that the nonlinear model was more accurate than linearity model with correlation coefficient of 0.904 9 and recovery of 557%. [Conclusion] It is feasible to determine melamine content by using the nonlinear model quantitatively. 展开更多
关键词 infrared spectroscopy Quantitative analysis Nonlinear model MELAMINE
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Rapid Non-destructive Detection for Molds Colony of Paddy Rice Based on Near Infrared Spectroscopy 被引量:4
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作者 Zhang Qiang Liu Cheng-hai +4 位作者 Sun Jing-kun Cui Yi-juan Li Qun Jia Fu-guo Zheng Xian-zhe 《Journal of Northeast Agricultural University(English Edition)》 CAS 2014年第4期54-60,共7页
Near infrared spectrometer technology under a wavelength range of 918-1045 nm was used to rapidly detect paddy rice that was stored at 5℃, 15℃ and 25℃. A total of 121 paddy rice samples were collected from artifici... Near infrared spectrometer technology under a wavelength range of 918-1045 nm was used to rapidly detect paddy rice that was stored at 5℃, 15℃ and 25℃. A total of 121 paddy rice samples were collected from artificial infection with moulds to build the calibration models to calculate the total number colony of moulds based on the principal component regression method and multiple linear regression method. The results of statistical analysis indicated that multiple linear regression method was applicable to the detection of the total number colony of moulds. The correlation of calibration data set was 0.943. The correlation of prediction data set was 0.897. Therefore, the result showed that near infrared spectroscopy could be a useful instrumental method for determining the total number colony of moulds in paddy rice. The near infrared spectroscopy methodology could be applied for monitoring mould contamination in postharvest paddy rice during storage and might become a powerful tool for monitoring the safety of the grain. 展开更多
关键词 near infrared spectroscopy paddy rice MOULDS multiple linear regression principal component analysis
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Acupuncture enhances brain function in patients with mild cognitive impairment: evidence from a functional-near infrared spectroscopy study 被引量:11
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作者 M.N.Afzal Khan Usman Ghafoor +1 位作者 Ho-Ryong Yoo Keum-Shik Hong 《Neural Regeneration Research》 SCIE CAS CSCD 2022年第8期1850-1856,共7页
Mild cognitive impairment(MCI)is a precursor to Alzheimer’s disease.It is imperative to develop a proper treatment for this neurological disease in the aging society.This observational study investigated the effects ... Mild cognitive impairment(MCI)is a precursor to Alzheimer’s disease.It is imperative to develop a proper treatment for this neurological disease in the aging society.This observational study investigated the effects of acupuncture therapy on MCI patients.Eleven healthy individuals and eleven MCI patients were recruited for this study.Oxy-and deoxy-hemoglobin signals in the prefrontal cortex during working-memory tasks were monitored using functional near-infrared spectroscopy.Before acupuncture treatment,working-memory experiments were conducted for healthy control(HC)and MCI groups(MCI-0),followed by 24 sessions of acupuncture for the MCI group.The acupuncture sessions were initially carried out for 6 weeks(two sessions per week),after which experiments were performed again on the MCI group(MCI-1).This was followed by another set of acupuncture sessions that also lasted for 6 weeks,after which the experiments were repeated on the MCI group(MCI-2).Statistical analyses of the signals and classifications based on activation maps as well as temporal features were performed.The highest classification accuracies obtained using binary connectivity maps were 85.7%HC vs.MCI-0,69.5%HC vs.MCI-1,and 61.69%HC vs.MCI-2.The classification accuracies using the temporal features mean from 5 seconds to 28 seconds and maximum(i.e,max(5:28 seconds))values were 60.6%HC vs.MCI-0,56.9%HC vs.MCI-1,and 56.4%HC vs.MCI-2.The results reveal that there was a change in the temporal characteristics of the hemodynamic response of MCI patients due to acupuncture.This was reflected by a reduction in the classification accuracy after the therapy,indicating that the patients’brain responses improved and became comparable to those of healthy subjects.A similar trend was reflected in the classification using the image feature.These results indicate that acupuncture can be used for the treatment of MCI patients. 展开更多
关键词 ACUPUNCTURE Alzheimer’s disease COGNITION convolutional neural network functional connectivity functional-near infrared spectroscopy hemodynamic response linear discriminant analysis mild cognitive impairment
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Rapid Detection on Quinoa Fiber Based on Near Infrared Spectroscopy
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作者 曹晓宁 田翔 +5 位作者 王君杰 刘思辰 穆志新 陆平 陶梅 乔治军 《Agricultural Science & Technology》 CAS 2016年第10期2383-2385,2422,共4页
[Objective] To explore a rapid determination method for fiber content in grains of quinoa. [Method] Near infrared spectra of 100 quinoa samples were collected. The predicted models for quantitative analysis of fiber c... [Objective] To explore a rapid determination method for fiber content in grains of quinoa. [Method] Near infrared spectra of 100 quinoa samples were collected. The predicted models for quantitative analysis of fiber contents in the grains were built using near infrared transmittance spectroscopy (NITS). [Result] In the wavelength range of 10 000-4 000 cm-1, the near infrared quantitative model of quinoa crude fiber was set up via first derivative + vector normalization preprocessing and combining with the data from chemical methods. The calibration and prediction effect were best, and then the cross validation determination coefficient (FFcv) and external validation determination coefficient (FFval) of fiber by near in- frared quantitative model were 0.884 8 and 0.876 1, respectively. [Conclusion] the model of NITS about complete grains quinoa fiber can be available for fast detecting quinoa fiber content. 展开更多
关键词 Chenopodium quinoa Willd FIBER near infrared spectroscopy
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Estimation of soil organic matter in the Ogan-Kuqa River Oasis, Northwest China, based on visible and near-infrared spectroscopy and machine learning
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作者 ZHOU Qian DING Jianli +3 位作者 GE Xiangyu LI Ke ZHANG Zipeng GU Yongsheng 《Journal of Arid Land》 SCIE CSCD 2023年第2期191-204,共14页
Visible and near-infrared(vis-NIR)spectroscopy technique allows for fast and efficient determination of soil organic matter(SOM).However,a prior requirement for the vis-NIR spectroscopy technique to predict SOM is the... Visible and near-infrared(vis-NIR)spectroscopy technique allows for fast and efficient determination of soil organic matter(SOM).However,a prior requirement for the vis-NIR spectroscopy technique to predict SOM is the effective removal of redundant information.Therefore,this study aims to select three wavelength selection strategies for obtaining the spectral response characteristics of SOM.The SOM content and spectral information of 110 soil samples from the Ogan-Kuqa River Oasis were measured under laboratory conditions in July 2017.Pearson correlation analysis was introduced to preselect spectral wavelengths from the preprocessed spectra that passed the 0.01 level significance test.The successive projection algorithm(SPA),competitive adaptive reweighted sampling(CARS),and Boruta algorithm were used to detect the optimal variables from the preselected wavelengths.Finally,partial least squares regression(PLSR)and random forest(RF)models combined with the optimal wavelengths were applied to develop a quantitative estimation model of the SOM content.The results demonstrate that the optimal variables selected were mainly located near the range of spectral absorption features(i.e.,1400.0,1900.0,and 2200.0 nm),and the CARS and Boruta algorithm also selected a few visible wavelengths located in the range of 480.0–510.0 nm.Both models can achieve a more satisfactory prediction of the SOM content,and the RF model had better accuracy than the PLSR model.The SOM content prediction model established by Boruta algorithm combined with the RF model performed best with 23 variables and the model achieved the coefficient of determination(R2)of 0.78 and the residual prediction deviation(RPD)of 2.38.The Boruta algorithm effectively removed redundant information and optimized the optimal wavelengths to improve the prediction accuracy of the estimated SOM content.Therefore,combining vis-NIR spectroscopy with machine learning to estimate SOM content is an important method to improve the accuracy of SOM prediction in arid land. 展开更多
关键词 soil organic matter content vis-NIR spectroscopy random forest Boruta algorithm machine learning
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DISCRIMINATIVE ANALYSIS OF FUNCTIONAL NEAR-INFRARED SPECTROSCOPY SIGNALS FOR DEVELOPMENT OF NEUROIMAGING BIOMARKERS OF ELDERLY DEPRESSION
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作者 YE ZHU TIANZI JIANG +1 位作者 YUAN ZHOU LISHA ZHAO 《Journal of Innovative Optical Health Sciences》 SCIE EI CAS 2010年第1期69-74,共6页
Functional near-infrared spectroscopy(fNIRS)is a neuroimaging technology which is suitable for psychiatric patients.Several fNIRS studies have found abnormal brain activations during cognitive tasks in elderly depress... Functional near-infrared spectroscopy(fNIRS)is a neuroimaging technology which is suitable for psychiatric patients.Several fNIRS studies have found abnormal brain activations during cognitive tasks in elderly depression.In this paper,we proposed a discriminative model of multivariate pattern classification based on fNIRS signals to distinguish elderly depressed patients from healthy controls.This model used the brain activation patterns during a verbal fluency task as features of classification.Then Pseudo-Fisher Linear Discriminant Analysis was performed on the feature space to generate discriminative model.Using leave-one-out(LOO)cross-validation,our results showed a correct classification rate of 88%.The discriminative model showed its ability to identify people with elderly depression and suggested that fNIRS may be an efficient clinical tool for diagnosis of depression.This study may provide the first step for the development of neuroimaging biomarkers based on fNIRS in psychiatric disorders. 展开更多
关键词 Functional near-infrared spectroscopy(fNIRS) Fisher linear discriminant analysis(FLDA) DEPRESSION
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Mathematic Models for Analysis of Quality Components in Sugarcane Juice with Fourier Transform Near Infrared Spectroscopy 被引量:4
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作者 CAOGan TANZhong-wen 《Agricultural Sciences in China》 CAS CSCD 2003年第2期190-194,共5页
With the technique of Fourier transform near infrared (FT-NIR) spectroscopy, the calibration models for quantitative analysis of sucrose and polarization in sugarcane juice were developed by using transmission mode an... With the technique of Fourier transform near infrared (FT-NIR) spectroscopy, the calibration models for quantitative analysis of sucrose and polarization in sugarcane juice were developed by using transmission mode and calibrating with partial least square (PLS) algorithm. The determination coefficients (R2) of the predicted models for sucrose and polarization in juice were 0. 9980 and 0. 9979 respectively; the root mean square errors of cross validation (RMSECV) were 0. 143 and 0. 155% for sucrose and polarization in juice respectively. The predictive errors measured by FT-NIR were close to those by routine laboratory methods. The results demonstrated that the FT-NIR methods had high accuracy and they were able to replace the routine laboratory analysis. It was also demonstrated that as a rapid and accurate measurement, the FT-NIR technique had potential applications in quality control of mill sugarcane, establishment of payment system based on sugarcane quality, and selection of clones in sugarcane breeding. 展开更多
关键词 Fourier transform near infrared spectroscopy Quantitative analysis SUGARCANE SUCROSE
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Application of Wavelet Transform in the Prediction of Navel Orange Vitamin C Content by Near-Infrared Spectroscopy 被引量:4
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作者 XIA Jun-fang LI Xiao-yu +2 位作者 LI Pei-wu MA Qian DING Xiao-xia 《Agricultural Sciences in China》 CAS CSCD 2007年第9期1067-1073,共7页
This study was to search for an approach for rapid measurement of orange vitamin C (Vc) content. By using different decomposing levels of Daubechies 3 wavelet transform, the near-infrared spectra signals obtained fr... This study was to search for an approach for rapid measurement of orange vitamin C (Vc) content. By using different decomposing levels of Daubechies 3 wavelet transform, the near-infrared spectra signals obtained from intact fruits of 100 navel orange samples were denoised, and the results of the predicted Vc contents for the corresponding samples determined by the reconstructed spectra after denoising were validated by means of PLS-CV (partial least squared-cross validation). It was shown that the prediction effects verified by PLS-CV analysis varied when different wavelet transform decomposing levels were employed. At the wavelet decomposing level 4, the best prediction effect was obtained, with the correlation coefficient R between the prediction and true values being 0.9574 and the expected variance RMSECV being as low as 3.9 mg 100 g^-1. Furthermore, the 11 different approaches for the pretreatment of the near-infrared spectrum were compared. It was found that the calibration model established by PLS using spectra pretreated by wavelet transform denoising provided the best prediction for Vc content, exhibiting the highest correlation between the prediction and true values by cross validation. In conclusion, the near infrared spectral model denoised by means of wavelet transform can be used for accurate, rapid, and nondestructive quantitative analysis on navel orange Vc content. 展开更多
关键词 navel orange near infrared spectroscopy wavelet denoising partial least square
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Determination of Active Components in a Natural Herb with Near Infrared Spectroscopy Based on Artificial Neural Networks 被引量:7
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作者 LIUXue-song QUHai-bin CHENGYi-yu 《Chemical Research in Chinese Universities》 SCIE CAS CSCD 2005年第1期36-43,共8页
The non-linear relationships between the contents of ginsenoside Rg 1, Rb 1, Rd and Panax notoginseng saponins(PNS) in Panax notoginseng root herb and the near infrared(NIR) diffuse reflectance spectra of the herb wer... The non-linear relationships between the contents of ginsenoside Rg 1, Rb 1, Rd and Panax notoginseng saponins(PNS) in Panax notoginseng root herb and the near infrared(NIR) diffuse reflectance spectra of the herb were established by means of artificial neural networks(ANNs). Four three-layered perception feed-forward networks were trained with an error back-propagation algorithm. The significant principal components of the NIR spectral data matrix were utilized as the input of the networks. The networks architecture and parameters were selected so as to offer less prediction errors. Relative prediction errors for Rg 1, Rb 1, Rd and PNS obtained with the optimum ANN models were 8.99%, 6.54%, 8.29%, and 5.17%, respectively, which were superior to those obtained with PLSR methods. It is verified that ANN is a suitable approach to model this complex non-linearity. The developed method is fast, non-destructive and accurate and it provides a new efficient approach for determining the active components in the complex system of natural herbs. 展开更多
关键词 near infrared diffuse reflectance spectroscopy Artificial neural network PLSR Non-linearity Analysis of natural herb Panax notoginseng
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Deep belief network-based drug identification using near infrared spectroscopy 被引量:2
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作者 Huihua Yang Baichao Hu +5 位作者 Xipeng Pan Shengke Yan Yanchun Feng Xuebo Zhang Lihui Yin Changqin Hu 《Journal of Innovative Optical Health Sciences》 SCIE EI CAS 2017年第2期1-10,共10页
Near infrared spectroscopy(NIRS)analysis technology,combined with chemometrics,can be effectively used in quick and nondestructive analysis of quality and category.In this paper,an effective drug identification method... Near infrared spectroscopy(NIRS)analysis technology,combined with chemometrics,can be effectively used in quick and nondestructive analysis of quality and category.In this paper,an effective drug identification method by using deep belief network(DBN)with dropout mecha-nism(dropout-DBN)to model NIRS is introduced,in which dropout is employed to overcome the overfitting problem coming from the small sample.This paper tests proposed method under datasets of different sizes with the example of near infrared diffuse refectance spectroscopy of erythromycin ethylsuccinate drugs and other drugs,aluminum and nonaluminum packaged.Meanwhile,it gives experiments to compare the proposed method's performance with back propagation(BP)neural network,support vector machines(SVMs)and sparse denoising auto-encoder(SDAE).The results show that for both binary classification and multi-classification,dropout mechanism can improve the classification accuracy,and dropout-DBN can achieve best classification accuracy in almost all cases.SDAE is similar to dropout-DBN in the aspects of classification accuracy and algorithm stability,which are higher than that of BP neural network and SVM methods.In terms of training time,dropout-DBN model is superior to SDAE model,but inferior to BP neural network and SVM methods.Therefore,dropout-DBN can be used as a modeling tool with effective binary and multi-class classification performance on a spectrum sample set of small size. 展开更多
关键词 Deep belief networks near infrared spectroscopy drug classification DROPOUT
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Near-infrared spectroscopy in adult cardiac surgery: between conflicting results and unexpected uses 被引量:2
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作者 Antonio Nenna Raffaele Barbato +4 位作者 Salvatore Matteo Greco Giuseppe Pugliese Mario Lusini Elvio Covino Massimo Chello 《Journal of Geriatric Cardiology》 SCIE CAS CSCD 2017年第11期659-661,共3页
Neurological complications after cardiac surgery, rang- ing from permanent stroke to transient dysfunction, repre- sent a key issue in the management of geriatric patients. Many patients aged 70 or more have history o... Neurological complications after cardiac surgery, rang- ing from permanent stroke to transient dysfunction, repre- sent a key issue in the management of geriatric patients. Many patients aged 70 or more have history of neurological dysfunctions, which increases the risk of complications and sequelae, Severe neurologic diseases, such as strokes, occur in up to 6% of patients undergoing cardiac surgery. Therefore, in the setting of fragile patients, prevention is more important than treatment. There are several intraop- erative mechanisms of neurological injury, such as embo- lism, inflammation, intraoperative anemia, 展开更多
关键词 Acute kidney injury Aortic valve stenosis Cardiac surgery Cerebral oximetry near infrared spectroscopy
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