Background:MicroRNAs(miRNAs)are post-transcriptional regulators with potential as biomarkers for cancer management.Datadriven competing endogenous RNA(ceRNA)network modeling is an effective way to decipher the complex...Background:MicroRNAs(miRNAs)are post-transcriptional regulators with potential as biomarkers for cancer management.Datadriven competing endogenous RNA(ceRNA)network modeling is an effective way to decipher the complex interplay between miRNAs and spongers.However,there are currently no general rules for ceRNA network-based biomarker prioritization.Methods and results:In this study,a novel bioinformatics model was developed by integrating gene expression with multivariate miRNA-target data for ceRNA network-based biomarker discovery.Compared with traditional methods,the structural vulnerability in the human long non-coding RNA(lncRNA)–miRNA–messenger RNAs(mRNA)network was comprehensively analyzed,and the single-line regulatory or competing mode among miRNAs,lncRNAs,and mRNAs was characterized and quantified as statistical evidence for miRNA biomarker identification.The application of this model to prostate cancer(PCa)metastasis identified a total of 12 miRNAs as putative biomarkers from the metastatic PCa-specific lncRNA–miRNA–mRNA network and nine of them have been previously reported as biomarkers for PCa metastasis.The receiver operating characteristic curve and cell line qRT-PCR experiments demonstrated the power of miR-26b-5p,miR-130a-3p,and miR-363-3p as novel candidates for predicting PCa metastasis.Moreover,PCa-associated pathways such as prostate cancer signaling,ERK/MAPK signaling,and TGF-βsignaling were significantly enriched by targets of identified miRNAs,indicating the underlying mechanisms of miRNAs in PCa carcinogenesis.Conclusions:A novel ceRNA-based bioinformatics model was proposed and applied to screen candidate miRNA biomarkers for PCa metastasis.Functional validations using human samples and clinical data will be performed for future translational studies on the identified miRNAs.展开更多
An image segmentation algorithm of the restrained fuzzy Kohonen clustering network (RFKCN) based on high- dimension fuzzy character is proposed. The algorithm includes two steps. The first step is the fuzzification ...An image segmentation algorithm of the restrained fuzzy Kohonen clustering network (RFKCN) based on high- dimension fuzzy character is proposed. The algorithm includes two steps. The first step is the fuzzification of pixels in which two redundant images are built by fuzzy mean value and fuzzy median value. The second step is to construct a three-dimensional (3-D) feature vector of redundant images and their original images and cluster the feature vector through RFKCN, to realize image seg- mentation. The proposed algorithm fully takes into account not only gray distribution information of pixels, but also relevant information and fuzzy information among neighboring pixels in constructing 3- D character space. Based on the combination of competitiveness, redundancy and complementary of the information, the proposed algorithm improves the accuracy of clustering. Theoretical anal- yses and experimental results demonstrate that the proposed algorithm has a good segmentation performance.展开更多
Terrestrial laser scanning(TLS) is a useful technology for rock mass characterization. A laser scanner produces a massive point cloud of a scanned area, such as an exposed rock surface in an underground tunnel,with mi...Terrestrial laser scanning(TLS) is a useful technology for rock mass characterization. A laser scanner produces a massive point cloud of a scanned area, such as an exposed rock surface in an underground tunnel,with millimeter precision. The density of the point cloud depends on several parameters from both the TLS operational conditions and the specifications of the project, such as the resolution and the quality of the laser scan, the section of the tunnel, the distance between scanning stations, and the purpose of the scans. One purpose of the scan can be to characterize the rock mass and statistically analyze the discontinuities that compose it for further discontinuous modeling. In these instances, additional data processing and a detailed analysis should be performed on the point cloud to extract the parameters to define a discrete fracture network(DFN) for each discontinuity set. I-site studio is a point cloud processing software that allows users to edit and process laser scans. This software contains a set of geotechnical analysis tools that assist engineers during the structural mapping process, allowing for greater and more representative data regarding the structural information of the rock mass, which may be used for generating DFNs. This paper presents the procedures used during a laser scan for characterizing discontinuities in an underground limestone mine and the results of the scan as applied to the generation of DFNs for further discontinuous modeling.展开更多
Accurate and reliable groundwater contaminant source characterization with limited contaminant concentration monitoring measurement data remains a challenging problem. This study presents an illustrative application o...Accurate and reliable groundwater contaminant source characterization with limited contaminant concentration monitoring measurement data remains a challenging problem. This study presents an illustrative application of developed methodologies to a real-life contaminated aquifer. The source characterization and optimal monitoring network design methodologies are used sequentially for a contaminated aquifer site located in New South Wales, Australia. Performance of the integrated optimal source characterization methodology combining linked simulation-optimization, fractal singularity mapping technique (FSMT) and Pareto optimal solutions is evaluated. This study presents an integrated application of optimal source characterization with spatiotemporal concentration measurement data obtained from sequentially designed monitoring networks. The proposed sequential source characterization and monitoring network design methodology shows efficiency in identifying the unknown source characteristics. The designed monitoring network achieves comparable efficiency and accuracy utilizing much smaller number of monitoring locations as compared to a more ideal scenario where concentration measurements from a very large number of widespread monitoring wells are available. The proposed methodology is potentially useful for efficient characterization of unknown contaminant sources in a complex contaminated aquifer site, where very little initial concentration measurement data are available. The illustrative application of the methodology to a real-life contaminated aquifer site demonstrates the capability and efficiency of the proposed methodology.展开更多
To raise the room temperature ionic conductivity and improve the mechanical strength of a PEO-based polymer electrolyte, a noncrystalline two-component epoxy electrolyte system has been prepared. The diglycidyl ether ...To raise the room temperature ionic conductivity and improve the mechanical strength of a PEO-based polymer electrolyte, a noncrystalline two-component epoxy electrolyte system has been prepared. The diglycidyl ether of polyethylene glycols as precursors of the system were synthesized by a two-step process. The presumed structure of the product was characterized, by ^(13)C, ~1H NMR and IR spectroscopy. It was found that a side-reaction occurred between the secondary hydroxyl group of PEG-chlorohydrin and epichlorohydrin in some degree, resulting in a by- product containing—CH_2Cl side group. By selecting a characteristic signal, which is undistorted by the increase in the length of CH_2 CH_2—O segment, a ~1H NMR approach of determining the equivalent epoxy weight (EEW) was proposed. The method is valid to specimens even though the EEW is as high as 2,000. The examination of the specimens by DSC showed that epoxidation greatly depressed the crystallinity of the PEG's, whereas the T_g was raised.展开更多
The paper presents a novel hydraulic fracturing model for the characterization and simulation of the complex fracture network in shale gas reservoirs. We go beyond the existing method that uses planar or orthogonal co...The paper presents a novel hydraulic fracturing model for the characterization and simulation of the complex fracture network in shale gas reservoirs. We go beyond the existing method that uses planar or orthogonal conjugate fractures for representing the ''complexity'' of the network. Bifurcation of fractures is performed utilizing the Lindenmayer system based on fractal geometry to describe the fracture propagation pattern, density and network connectivity. Four controlling parameters are proposed to describe the details of complex fractures and stimulated reservoir volume(SRV). The results show that due to the multilevel feature of fractal fractures, the model could provide a simple method for contributing reservoir volume calibration. The primary-and second-stage fracture networks across the overall SRV are the main contributions to the production, while the induced fracture network just contributes another 20% in the late producing period. We also conduct simulation with respect to different refracturing cases and find that increasing the complexity of the fracture network provides better performance than only enhancing the fracture conductivity.展开更多
Background: Postnatal transfer (PT) is interhospital transport of care-needing newborns. In 2016, a perinatal network was implemented to facilitate PT in the town of Douala, Cameroon. The network was supposed to impro...Background: Postnatal transfer (PT) is interhospital transport of care-needing newborns. In 2016, a perinatal network was implemented to facilitate PT in the town of Douala, Cameroon. The network was supposed to improve PT-related care standards. This study aimed at determining characteristics of PT five years following the implementation of this network. Methods: A cross-sectional study was carried out from February to May 2021 at neonatology wards of six hospitals in Douala. Medical records of newborns transferred to the hospitals were scrutinized to document their characteristics. Parents were contacted to obtain information on PT route and itinerary. Data were analyzed using Epi Info software and summarized as percentages, mean and odds ratio. Results: In total, 234 of the 1159 newborns admitted were transferred, giving a PT prevalence of 20.2% (95% CI 17.9% - 22.6%). Male-to-female ratio of the transferred newborns was 1.3. Neonatal infection (26.5%), prematurity (23.5%) and respiratory distress (15.4%) were the main reasons for transfer. Only 3% of the PT was medicalized while only 2% of the newborns were transferred through perinatal network. On admission, hypothermia and respiratory distress were found in 31% and 35% of the newborns, respectively. The mortality rate among babies was 20% and these had a two-fold risk of dying (95% CI 1.58 - 3.44, p Conclusion: PT and the perinatal network are lowly organized and implemented in Douala. Sensitization of medical staff on in utero transfer, creating center for coordination of the network, and implementation of neonatal transport system could improve the quality of PT.展开更多
A CRT characterization method based on color appearance matching is presented. A matching between Munsell color chips and CRT charts was obtained in vision perceiver in typical office environment and viewing condition...A CRT characterization method based on color appearance matching is presented. A matching between Munsell color chips and CRT charts was obtained in vision perceiver in typical office environment and viewing condition by recommending. And neural networks were utilized to accomplish the color space conversion from CIE standard color space to CRT device color space. The neural networks related the color space conversion and color reproduction of soft/hard-copy directly to the influence of the illuminance and viewing condition in vision perceiver. The average color difference of training samples is 3.06 and that of testing samples is 5.17. The experiment results indicated that the neural networks can satisfy the requirements for the color appearance of hard-copy reproduction in CRT.展开更多
基金Thisworkwas supported by the National Natural Science Foundation of China(Grant No.32070671)the Natural Science Foundation of the Jiangsu Higher Education Institutions of China(Grant No.20KJB180010)+1 种基金the Key Research and Development Program of Jiangsu Province(Grant No.BE2020655)the regional innovation cooperation between Sichuan and Guangxi Provinces(Grant No.2020YFQ0019).
文摘Background:MicroRNAs(miRNAs)are post-transcriptional regulators with potential as biomarkers for cancer management.Datadriven competing endogenous RNA(ceRNA)network modeling is an effective way to decipher the complex interplay between miRNAs and spongers.However,there are currently no general rules for ceRNA network-based biomarker prioritization.Methods and results:In this study,a novel bioinformatics model was developed by integrating gene expression with multivariate miRNA-target data for ceRNA network-based biomarker discovery.Compared with traditional methods,the structural vulnerability in the human long non-coding RNA(lncRNA)–miRNA–messenger RNAs(mRNA)network was comprehensively analyzed,and the single-line regulatory or competing mode among miRNAs,lncRNAs,and mRNAs was characterized and quantified as statistical evidence for miRNA biomarker identification.The application of this model to prostate cancer(PCa)metastasis identified a total of 12 miRNAs as putative biomarkers from the metastatic PCa-specific lncRNA–miRNA–mRNA network and nine of them have been previously reported as biomarkers for PCa metastasis.The receiver operating characteristic curve and cell line qRT-PCR experiments demonstrated the power of miR-26b-5p,miR-130a-3p,and miR-363-3p as novel candidates for predicting PCa metastasis.Moreover,PCa-associated pathways such as prostate cancer signaling,ERK/MAPK signaling,and TGF-βsignaling were significantly enriched by targets of identified miRNAs,indicating the underlying mechanisms of miRNAs in PCa carcinogenesis.Conclusions:A novel ceRNA-based bioinformatics model was proposed and applied to screen candidate miRNA biomarkers for PCa metastasis.Functional validations using human samples and clinical data will be performed for future translational studies on the identified miRNAs.
基金supported by the National Natural Science Foundation of China(61073106)the Aerospace Science and Technology Innovation Fund(CASC201105)
文摘An image segmentation algorithm of the restrained fuzzy Kohonen clustering network (RFKCN) based on high- dimension fuzzy character is proposed. The algorithm includes two steps. The first step is the fuzzification of pixels in which two redundant images are built by fuzzy mean value and fuzzy median value. The second step is to construct a three-dimensional (3-D) feature vector of redundant images and their original images and cluster the feature vector through RFKCN, to realize image seg- mentation. The proposed algorithm fully takes into account not only gray distribution information of pixels, but also relevant information and fuzzy information among neighboring pixels in constructing 3- D character space. Based on the combination of competitiveness, redundancy and complementary of the information, the proposed algorithm improves the accuracy of clustering. Theoretical anal- yses and experimental results demonstrate that the proposed algorithm has a good segmentation performance.
基金funded by the NIOSH Mining Program under Contract No. 200-2016-91300
文摘Terrestrial laser scanning(TLS) is a useful technology for rock mass characterization. A laser scanner produces a massive point cloud of a scanned area, such as an exposed rock surface in an underground tunnel,with millimeter precision. The density of the point cloud depends on several parameters from both the TLS operational conditions and the specifications of the project, such as the resolution and the quality of the laser scan, the section of the tunnel, the distance between scanning stations, and the purpose of the scans. One purpose of the scan can be to characterize the rock mass and statistically analyze the discontinuities that compose it for further discontinuous modeling. In these instances, additional data processing and a detailed analysis should be performed on the point cloud to extract the parameters to define a discrete fracture network(DFN) for each discontinuity set. I-site studio is a point cloud processing software that allows users to edit and process laser scans. This software contains a set of geotechnical analysis tools that assist engineers during the structural mapping process, allowing for greater and more representative data regarding the structural information of the rock mass, which may be used for generating DFNs. This paper presents the procedures used during a laser scan for characterizing discontinuities in an underground limestone mine and the results of the scan as applied to the generation of DFNs for further discontinuous modeling.
文摘Accurate and reliable groundwater contaminant source characterization with limited contaminant concentration monitoring measurement data remains a challenging problem. This study presents an illustrative application of developed methodologies to a real-life contaminated aquifer. The source characterization and optimal monitoring network design methodologies are used sequentially for a contaminated aquifer site located in New South Wales, Australia. Performance of the integrated optimal source characterization methodology combining linked simulation-optimization, fractal singularity mapping technique (FSMT) and Pareto optimal solutions is evaluated. This study presents an integrated application of optimal source characterization with spatiotemporal concentration measurement data obtained from sequentially designed monitoring networks. The proposed sequential source characterization and monitoring network design methodology shows efficiency in identifying the unknown source characteristics. The designed monitoring network achieves comparable efficiency and accuracy utilizing much smaller number of monitoring locations as compared to a more ideal scenario where concentration measurements from a very large number of widespread monitoring wells are available. The proposed methodology is potentially useful for efficient characterization of unknown contaminant sources in a complex contaminated aquifer site, where very little initial concentration measurement data are available. The illustrative application of the methodology to a real-life contaminated aquifer site demonstrates the capability and efficiency of the proposed methodology.
基金The project supported by National Natural Science Foundation of China.
文摘To raise the room temperature ionic conductivity and improve the mechanical strength of a PEO-based polymer electrolyte, a noncrystalline two-component epoxy electrolyte system has been prepared. The diglycidyl ether of polyethylene glycols as precursors of the system were synthesized by a two-step process. The presumed structure of the product was characterized, by ^(13)C, ~1H NMR and IR spectroscopy. It was found that a side-reaction occurred between the secondary hydroxyl group of PEG-chlorohydrin and epichlorohydrin in some degree, resulting in a by- product containing—CH_2Cl side group. By selecting a characteristic signal, which is undistorted by the increase in the length of CH_2 CH_2—O segment, a ~1H NMR approach of determining the equivalent epoxy weight (EEW) was proposed. The method is valid to specimens even though the EEW is as high as 2,000. The examination of the specimens by DSC showed that epoxidation greatly depressed the crystallinity of the PEG's, whereas the T_g was raised.
基金supported by National Natural Science Foundation of China(No.51674279)China Postdoctoral Science Foundation(No.2016M602227)a grant from National Science and Technology Major Project(No.2017ZX05049-006)
文摘The paper presents a novel hydraulic fracturing model for the characterization and simulation of the complex fracture network in shale gas reservoirs. We go beyond the existing method that uses planar or orthogonal conjugate fractures for representing the ''complexity'' of the network. Bifurcation of fractures is performed utilizing the Lindenmayer system based on fractal geometry to describe the fracture propagation pattern, density and network connectivity. Four controlling parameters are proposed to describe the details of complex fractures and stimulated reservoir volume(SRV). The results show that due to the multilevel feature of fractal fractures, the model could provide a simple method for contributing reservoir volume calibration. The primary-and second-stage fracture networks across the overall SRV are the main contributions to the production, while the induced fracture network just contributes another 20% in the late producing period. We also conduct simulation with respect to different refracturing cases and find that increasing the complexity of the fracture network provides better performance than only enhancing the fracture conductivity.
文摘Background: Postnatal transfer (PT) is interhospital transport of care-needing newborns. In 2016, a perinatal network was implemented to facilitate PT in the town of Douala, Cameroon. The network was supposed to improve PT-related care standards. This study aimed at determining characteristics of PT five years following the implementation of this network. Methods: A cross-sectional study was carried out from February to May 2021 at neonatology wards of six hospitals in Douala. Medical records of newborns transferred to the hospitals were scrutinized to document their characteristics. Parents were contacted to obtain information on PT route and itinerary. Data were analyzed using Epi Info software and summarized as percentages, mean and odds ratio. Results: In total, 234 of the 1159 newborns admitted were transferred, giving a PT prevalence of 20.2% (95% CI 17.9% - 22.6%). Male-to-female ratio of the transferred newborns was 1.3. Neonatal infection (26.5%), prematurity (23.5%) and respiratory distress (15.4%) were the main reasons for transfer. Only 3% of the PT was medicalized while only 2% of the newborns were transferred through perinatal network. On admission, hypothermia and respiratory distress were found in 31% and 35% of the newborns, respectively. The mortality rate among babies was 20% and these had a two-fold risk of dying (95% CI 1.58 - 3.44, p Conclusion: PT and the perinatal network are lowly organized and implemented in Douala. Sensitization of medical staff on in utero transfer, creating center for coordination of the network, and implementation of neonatal transport system could improve the quality of PT.
文摘A CRT characterization method based on color appearance matching is presented. A matching between Munsell color chips and CRT charts was obtained in vision perceiver in typical office environment and viewing condition by recommending. And neural networks were utilized to accomplish the color space conversion from CIE standard color space to CRT device color space. The neural networks related the color space conversion and color reproduction of soft/hard-copy directly to the influence of the illuminance and viewing condition in vision perceiver. The average color difference of training samples is 3.06 and that of testing samples is 5.17. The experiment results indicated that the neural networks can satisfy the requirements for the color appearance of hard-copy reproduction in CRT.