Natural Bond Orbital(NBO)Population Analysis,First Order Hyperpolarizabilities and Thermodynamic Properties of Cyclohexanone

The molecular structure of cyclohexanone was calculated by the B3LYP density functional model with 6-31G(d,p)and 6-311++G(d,p)basis set by Gaussian program.The results from natural bond orbital(NBO)analysis have been analyzed in terms of the hybridization of atoms and the electronic structure of the title molecule.The electron density based local reactivity descriptors such as Fukui functions were calculated.The dipole moment(μ)and polarizability(α),anisotropy polarizability(Δα)and first order hyperpolarizability(βtot)of the molecule have been reported.Thermodynamic properties of the title compound were calculated at different temperatures.

Structure and Vibrational Spectroscopy of 2-Methylallyl Alcohol

The intramolecular O−H…πhydrogen bond has garnered significant research interest in recent decades.In this work,we utilized the infrared(IR)-vacuum-ultraviolet(VUV)nonresonant ionization detected IR spectroscopy(NRID-IR)method to study the molecular structure of neutral and cationic 2-methylallyl alcohol(MAA,CH_(2)=C(CH_(3))−CH_(2)−OH).Density functional theory calculations revealed five stable neutral and three stable cationic MAA conformers,respectively.Two neutral MAA conformers are expected to have an O−H…πintramolecular hydrogen bond interaction,based on the structural characterization that the OH group is directed toward the C=C double bond.The IR spectra of both neutral(2700−3700 cm^(−1))and cationic MAA(2500−7200 cm^(−1))were measured,and the anharmonic IR spectra were calculated at the B3LYP-D3(BJ)/def2-TZVPP level.The OH stretching vibration frequency of neutral MAA was observed at 3656 cm−1,slightly lower than those of methanol and ethanol.In contrast,the OH stretching vibration of cationic MAA was red-shifted by about 140 cm^(−1)compared to neutral MAA.The interaction region indicator and natural bond orbital analysis suggest that the O−H…πinteraction in neutral MAA is weak,and may not play a major role in stabilizing the neutral MAA.

The Superconductivity in Fe-Based Family of Superconductors and Its Electronic Structure Analysis in Presence of Dopants Rh and Pd

The discovered in 2008 Fe-based superconductors (SC) are a paramagnetic semimetal at ambient temperature and in some cases they become superconductor upon doping. In spite of so many years since its discovery it is still not known the mechanism that leads to superconductivity. The electronic structure study is used for determining key features of the SC mechanism in these materials. The calculations were performed using the modern suite of programs MOLPRO 2021. We performed quantum calculations of a cluster embedded in a background charge distribution that represents the infinite crystal. The Natural Population Analysis was used for determining the charge and spin distribution in the studied materials. As follows from our results, the possible mechanism for superconductivity corresponds to the RVB theory proposed by Anderson for high Tc superconductivity in cuprates.

Theoretical Study on the Photodegradation Mechanism of Pyrethroid Insecticide Fenvalerate in Water

The photodegradation mechanism of fenvalerate in water has been investigated by density functional theory（DFT）.The geometries of reactants,transition states,intermediates and products are optimized at the B3LYP/6-31G＊ level.The calculated results indicate that the reaction process mainly includes the nucleophilic attack and the substitution reaction by hydroxyl radical to the carbonyl group.By vibrational frequency analysis and intrinsic reaction coordinate（IRC） method,the transition state and its reaction pathway are confirmed.Moreover,the changes of natural population analysis（NPA）,calculated using the Natural bond orbital（NBO） method,are analyzed along with the degradation reaction which can explain the variation of chemical bonds.Additionally,the solvent effect is also investigated and the results show that the reaction preferably takes place in water.

Molecular Dynamics Insights into Electron-Catalyzed Dissociation Repair of Cyclobutane Pyrimidine Dimer

Excess electrons are not only an important source of radiation damage,but also participate in the repair process of radiation damage such as cyclobutane pyrimidine dimer(CPD).Using ab initio molecular dynamics(AIMD)simulations,we reproduce the single excess electron stepwise catalytic CPD dissociation process in detail with an emphasis on the energy levels and molecular structure details associated with excess electrons.On the basis of the AIMD simulations on the CPD aqueous solution with two vertically added excess electrons,we exclude the early-proposed[2+2]-like concerted synchronous dissociation mechanism,and analyze the difference between the symmetry of the actual reaction and the symmetry of the frontier molecular orbitals which deeply impact the mechanism.Importantly,we propose a new model of the stepwise electron-catalyzed dissociation mechanism that conforms to the reality.This work not only provides dynamics insights into the excess electron catalyzed dissociation mechanism,but also reveals different roles of two excess electrons in two bond-cleavage steps(promoting versus inhibiting).

Quantum Study on the Hydrogen Bonding Interaction of Luteolin-(CH_3OH)_n

The optimized geometries and vibration frequencies of luteolin,methanol and luteolin-（CH3OH）n complexes have been investigated by density functional theory using B3LYP method.Four stable luteolin-CH3OH complexes,six stable luteolin-（CH3OH）2 complexes and four stable luteolin-（CH3OH）3 complexes have been obtained.The theories of atoms in molecules（AIM） and natural bond orbital（NBO） have been used to analyze the hydrogen bonds of these compounds,and their interaction energies corrected by basis set superposition error are between-8.046 and-76.124 kJ/mol.The calculation results indicate strong hydrogen bonding interactions in the luteolin-（CH3OH）n complexes.Then the nuclear magnetic resonance（NMR） and electronic absorption spectrum of luteolin have been calculated,and the results are in agreement with the experimental data.

Density Functional Theoretical Study on the Reaction Mechanism of HOCO and Its Radical

In this paper, the reaction mechanism of HOCO with its radical has been investigated deeply by density functional theory（DFT）, while the geometries and harmonic vibration frequencies of the reactants, intermediates, transition states and products have been calculated at the B3LYP/6-311＋＋G＊＊ level. The CCSD（T）/cc-p VQZ method was used to further calculate the single-point energy of each stationary point along the reaction channel. The result shows that channels（b） and（d） via carbon-carbon intermediates are competing with the ones（e）,（f）,（i） and（l） through carbon-oxygen intermediates, and the six channels are dominant for the title reaction to produce HCOOH and CO2. The result also indicates that the hydrogen abstraction from the HOCO radical can be performed quickly by the self-interaction of HOCO in the absence of other radicals or atoms, which indirectly proves for the first time that the ground-state cis-HOCO radical is not decomposed by the tunneling effect. In addition, the charges of natural population analysis（NPA） and the variation of chemical bonds have been analyzed by the Natural Bond Orbital（NBO） method along with the important reaction path.

Theoretical Study on Xe…N non-Covalent Interactions:Three Hybridization N with XeO_(3) and XeOF_(2)

The interactions of complexes of XeOF_(2) and XeO_(3) with a series of different hybridization N-containing donors are studied by means of DFT and MP_(2) calculations.The aerogen bonding interaction energies range from 6.5 kcal/mol to19.9 kcal/mol between XeO_(3) or XeOF_(2) and typical N-containing donors.The sequence of interaction for N-containing hy-bridization is sp^(3)>sp^(2)>sp,and XeO_(3)is higher than XeOF_(2).For some donors of sp^(2)and sp^(3) hybridization,the steric effect plays a minor role in the interaction with the evidence of reduced density gradient plots.The dominant stable part is the electrostatic interaction.In complex of XeO_(3),the weight of polarization is larger than dispersion,while the situation is opposite for XeOF_(2)complexes.Except for the sum of the maximum value of molecular electrostatic potential on Xe atom and minimum value of molecular electrostatic potential on N atom,the other five interaction parameters including the potential energy density at bond critical point,the equilibrium distances,interaction energies with the basis set superposition error correction,localized molecular orbital energy decomposition analysis interaction energies,and the electron charge density,show great linear correlation coefficients with each other.

A comparative study on the reactivity of cationic niobium clusters with nitrogen and oxygen

We have prepared well-resolved Nb^(+)_(n)(n=1-10)clusters and report here an in-depth study on the es-sentially different reactivity with N_(2)and O_(2),by utilizing a multiple-ion laminar flow tube reactor in tandem with a customized triple quadrupole mass spectrometer(MIFT-TQMS).As results,the Nb^(+)_(n)clus-ters are found to readily react with N_(2)and form adsorption products Nb_(n)N^(+)_(2m);in contrast,the reactions with O_(2)give rise to Nb_(n)O^(+)_(1−4)products,and the odd-oxygen products indicate O-O bond dissociation,as well as increased mass abundance of NbO^(+)pertaining to oxygen-etching reactions.We illustrate how N_(2) prefers a physical adsorption on Nb^(+)_(n)clusters with an end-on orientation for all the products,and allow for size-selective Nb^(+)_(n)clusters to act as electron donor or acceptor in forming Nb_(n)N^(+)_(2m).In contrast to these nitrides,the dioxides Nb_(n)O+2display much larger binding energies,with O_(2)always as an electron acceptor,corresponding to superoxide or peroxide states in the initial reactions.Density-of-states and orbital anal-yses show that the interactions between Nb^(+)_(n)and O_(2)are dominated by strongπ-backdonation indicative of incidental electron transfer;whereas weakπ-backdonation and simultaneousσdonation interactions exist in Nb_(n)N^(+)_(2).Further,reaction dynamics analysis illustrates the different interactions for N_(2)and O_(2) in approaching the Nb^(+)_(n)clusters,showing the energy diagrams for N_(2)adsorption and O-O bond dissoci-ation in producing odd-oxygen products.Fragment analyses with orbital correlation and donor-acceptor charge transfer are also performed,giving rise to full insights into the reactivities and interactions of such transition metal clusters with typical diatomic molecules.

Insight understanding into influence of binding mode of carboxylate with metal ion on ligand-centered luminescence properties in Pb-based coordination polymers

In the crystal engineering area,it is important to clearly demonstrating the relationship of structure and certain functionality.Herein,we present the study of the relationship of structure with phosphorescent nature for two new room temperature phosphorescence(RTP) coordination polymers(CPs).[Pb(FDA)(H_(2)O)](1) and [NH_(3)(CH_(3))NH_(2)(CH_(3))_(2)][Pb_(4)(FDA)_(5)](2),where H_(2) FDA is 2,5-furandicarboxylic acid,have been synthesized by solvothermal method using different solvents and Pb^(2+) sources and characterized by microanalysis,powderX-ray diffraction(PXRD),thermogravimetric(TG),IR and UV-vis spectra.The Pb^(2+)ions adopt bicapped triangle prism coordination sphere in 1 and 2,which are connected together via FDA^(2-) ligands into bilayer structure in 1 while pillared-layer framework in 2.The FDA^(2-) ligands show different bridging modes in 1 and 2,leading to distinct coordination interactions between Pb^(2+) ion and FDA^(2-) ligand in both CPs.Both 1 and 2 emit ligand-centered RTP due to the heavy atom of Pb^(2+) ion,with a lifetime and quantum yield of 0.62 ms and 14.9% in 1 versus 1.69 ms and 15.7% in 2.The emission peak shows significant redshift(79 nm) in 2 regarding 1,which arises from their distinction of coordination interactions between Pb^(2+) ion and FDA^(2-) ligand in both CPs.

Theoretical Study on N-H…O Blue-shifted H-Bond for HNO…H2O2 Complex

A theoretical study on the blue-shifted H-bond N-H…O and red-shifted H-bond O-H…O in the complex HNO…H2O2 was conducted by employment of both standard and counterpoise-corrected methods to calculate the geometric structures and vibrational frequencies at the MP2/6-31G（d）, MP2/6-31 ＋ G（d,p）, MP2/6-311 ＋ ＋ G（d,p）, B3LYP/6-31G（d）, B3LYP/6-31 ＋G（d,p） and B3LYP/6-311 ＋ ＋G（d,p） levels. In the H-bond N-H…O, the calculated blue shift of N-H stretching frequency is in the vicinity of 120 cm^-1 and this is indeed the largest theoretical estimate of a blue shift in the X-H…Y H-bond ever reported in the literature. From the natural bond orbital analysis, the red-shifted H-bond O-H…O can be explained on the basis of the dominant role of the hyperconjugation. For the blue-shifted H-bond N-H…O, the hyperconjugation was inhibited due to the existence of significant electron density redistribution effect, and the large blue shift of the N-H stretching frequency was prominently due to the rehybridization of spn N-H hybrid orbital.

Stability/Instability of Solitary waves with Nonzero Asymptotic Value for a PDE in Microstructural Solid Materials

The present paper deals with results of stability/instability of solitary waves with nonzero asymptotic value for a microstructure PDE. By the exact solitary wave solutions and detailed computations, we set up the explicit expression for the discrimination d′′（c）. Finally, a complete study of orbital stablity/instablity for the explicit exact solutions is given.