A disulfide-modified nucleoside was designed and synthesized. After loading the modified nucleoside on controlled pore glass （CPG）, solid phase synthesis strategy was used to prepare peptide-oligonucleotide conjugat...A disulfide-modified nucleoside was designed and synthesized. After loading the modified nucleoside on controlled pore glass （CPG）, solid phase synthesis strategy was used to prepare peptide-oligonucleotide conjugates （N-3＇） containing disulfide bond unit. The 3＇-sense strand peptide-siRNA conjugate （VII） maintained good gene silencing activity, while that of the 3＇-antisense strand conjugate decreased somewhat. And the sense strand off-target effect of VII decreased remarkably.展开更多
PBOND is a web server that predicts the conformation of the peptide bond between any two amino acids. PBOND classifies the peptide bonds into one out of four classes, namely cis imide （cis-Pro）, cis amide （cis-non...PBOND is a web server that predicts the conformation of the peptide bond between any two amino acids. PBOND classifies the peptide bonds into one out of four classes, namely cis imide （cis-Pro）, cis amide （cis-nonPro）, trans imide （trans-Pro） and trans amide （trans-nonPro）. Moreover, for every prediction a reliability index is computed. The underlying structure of the server consists of three stages： （1） feature extraction, （2） feature selection and （3） peptide bond classification. PBOND can handle both single sequences as well as multiple sequences for batch processing. The predictions can either be directly downloaded from the web site or returned via e-mail. The PBOND web server is freely available at http：//195.251.198.21/pbond.html.展开更多
Silkworm silk and spider silk have been attracting numerous interests.Rapid solvation of silkworm silk protein and spider silk protein without hydrolysis of peptide bonds is highly desirable.Microwave irradiation has ...Silkworm silk and spider silk have been attracting numerous interests.Rapid solvation of silkworm silk protein and spider silk protein without hydrolysis of peptide bonds is highly desirable.Microwave irradiation has been proposed for facile extraction of water-soluble silk protein by various liquid media.However,microwave exposure can cause hydrolysis of peptide bonds,leading to irreversible degradation of silk protein.In this study,a series of representative dipeptides and a rationally designed recombinant protein derived from silk protein is employed to investigate the efect of microwave on the stability of the peptide bonds during a long time dissolution process,i.e.,heating at 60℃in a CaCl_(2):CH_(3)CH_(2)OH:H_(2)O(1:2:8)solution.Results demonstrate that microwave irradiation imposes a minor damage and a negligible cleavage of the peptide bonds,compared with the conventional heating method.The microwave irradiation treatment suggested in this is suitable for dissolution of silk protein.It is anticipated that this approach can be developed to a commercial level commercially.展开更多
基金supported by the National Natural Science Foundation of China(No.20932001)the Ministry of Science and Technology of China(Nos.2012CB720604,2012AA022501)
文摘A disulfide-modified nucleoside was designed and synthesized. After loading the modified nucleoside on controlled pore glass （CPG）, solid phase synthesis strategy was used to prepare peptide-oligonucleotide conjugates （N-3＇） containing disulfide bond unit. The 3＇-sense strand peptide-siRNA conjugate （VII） maintained good gene silencing activity, while that of the 3＇-antisense strand conjugate decreased somewhat. And the sense strand off-target effect of VII decreased remarkably.
文摘PBOND is a web server that predicts the conformation of the peptide bond between any two amino acids. PBOND classifies the peptide bonds into one out of four classes, namely cis imide （cis-Pro）, cis amide （cis-nonPro）, trans imide （trans-Pro） and trans amide （trans-nonPro）. Moreover, for every prediction a reliability index is computed. The underlying structure of the server consists of three stages： （1） feature extraction, （2） feature selection and （3） peptide bond classification. PBOND can handle both single sequences as well as multiple sequences for batch processing. The predictions can either be directly downloaded from the web site or returned via e-mail. The PBOND web server is freely available at http：//195.251.198.21/pbond.html.
基金This work was supported by the National Natural Science Foundation of China[grant number:21972009]the National Key Research Program of China[grant number:2016YFA0201700/2016YFA0201701].
文摘Silkworm silk and spider silk have been attracting numerous interests.Rapid solvation of silkworm silk protein and spider silk protein without hydrolysis of peptide bonds is highly desirable.Microwave irradiation has been proposed for facile extraction of water-soluble silk protein by various liquid media.However,microwave exposure can cause hydrolysis of peptide bonds,leading to irreversible degradation of silk protein.In this study,a series of representative dipeptides and a rationally designed recombinant protein derived from silk protein is employed to investigate the efect of microwave on the stability of the peptide bonds during a long time dissolution process,i.e.,heating at 60℃in a CaCl_(2):CH_(3)CH_(2)OH:H_(2)O(1:2:8)solution.Results demonstrate that microwave irradiation imposes a minor damage and a negligible cleavage of the peptide bonds,compared with the conventional heating method.The microwave irradiation treatment suggested in this is suitable for dissolution of silk protein.It is anticipated that this approach can be developed to a commercial level commercially.
