The grain size distribution of bulk sediment samples was decomposed in a core to reconstruct paleoceanographic evolution over the past 60 ka in the northern Norwegian Sea.The results show that sediments consisted of 3...The grain size distribution of bulk sediment samples was decomposed in a core to reconstruct paleoceanographic evolution over the past 60 ka in the northern Norwegian Sea.The results show that sediments consisted of 3–4 grain populations derived from the North Atlantic Current(NAC)and Barents Ice Sheet(BIS).The grain size data suggest three palaeoceanographic evolution stages:(1)an environment affected by BIS and NAC and changed with the interstadial/stadial transition in phase with the Greenland ice-core record at 60–31 ka BP,during which discharge of icebergs and the content of the coarsest population containing ice-rafted debris(IRD)in the sediments increased significantly during stadial,while the fine silt population containing volcanic glasses increased with the enhancement of NAC during the interstadial;(2)an extreme environment controlled by BIS at31–13 ka BP.BIS reached to its maximum at about 31 ka BP and the turbid plumes that formed at the leading edge of BIS contributed to a significant increase in the clayey population in sediments.Icebergs drained into the northern Norwegian Sea with periodical calving of the BIS at 31–19 ka BP.Subsequently,the ablation of the BIS discharged massive floods with clayey sediments and icebergs into the Norwegian Sea at 19–13 ka BP,resulting in a constant increase in clay and IRD in sediments;and(3)a marine environment similar to the present one under the strong influence of NAC following the complete melting of the BIS after 13 ka BP,NAC is the dominant transport agent and no IRD occurred in sediments.The fine silt populations containing volcanic glasses transported by NAC significantly increased.展开更多
In 2002, six cohorts ofbroodstock bay scallop Argopecten irradians irradians (Ne=1, 2, 10, 30, 50 and control) were randomly chosen from a population of bay scallop to produce offspring. After one year rearing, with...In 2002, six cohorts ofbroodstock bay scallop Argopecten irradians irradians (Ne=1, 2, 10, 30, 50 and control) were randomly chosen from a population of bay scallop to produce offspring. After one year rearing, with the progeny matured, the similar experiment was done to produce the F2 generation. To determine the magnitude of Ne effects, the growth and survival rates in larvae and adult of six F2 groups were compared. Results showed that inbreeding depression existed not only in the Ne=1 group but also in the Ne=2 group. The growth and survival rates of the two groups were significantly lower than those of the other groups (Ne=10, 30, 50, control), and there were no significant differences among the latter (P〉0.05). At the same time, the amount of depression in the Ne=1 group was significantly higher than that of the Ne=2 group (P〈0.05). These results indicated that the low effective population size (Ne), which increases the possibility of inbreeding, could lead to some harmful effects on the offspring. So it is essential to maintain a high level of Ne in commercial seed production. Fta'thermore, as the high fecundity of bay scallop might lead to increased inbreeding, selecting broodstock from different growout sites is recommended.展开更多
Eight microsatellite markers were used to analyze genetic diversity, level of inbreeding, and effective population size of spawner and recaptured populations of Chinese shrimp(Fenneropenaeus chinensis) during stock ...Eight microsatellite markers were used to analyze genetic diversity, level of inbreeding, and effective population size of spawner and recaptured populations of Chinese shrimp(Fenneropenaeus chinensis) during stock enhancement in the Bohai Bay in 2013. A total of 254 and 238 alleles were identified in the spawner and recaptured populations, respectively, and the numbers of alleles(N_a) were 8–63 and 6–60, respectively. The numbers of effective alleles(N_e) were 2.52–21.60 and 2.67–20.72, respectively. The polymorphism information content ranged from 0.529 to 0.952. The observed heterozygosity(H_o) values(0.638–0.910 and 0.712–0.927) were lower than the expected heterozygosity(H_e) values(0.603–0.954 and 0.625–0.952), which indicated that the two populations possessed a rich genetic diversity. In 16 tests(2 populations×8 loci), 13 tests deviated from the HardyWeinberg equilibrium. F_(is) values were positive at seven loci and the inbreeding coefficients(F) of the two populations estimated by trio ML were 13.234% and 11.603%, suggesting that there was a relatively high degree of inbreeding. A certain level of inbreeding depression had occurred in the Chinese shrimp population. F_(st) values ranged from 0 to 0.059, with a mean of 0.028, displaying a low level of genetic differentiation in the two populations. Effective population sizes(3 060.2 and 3 842.8) were higher than the minimum number suggested for retaining the evolutionary potential to adapt to new environmental conditions. For enhancement activity in 2014,the ideal number of captured shrimp spawners should have ranged from 7 686 to 19 214 to maintain genetic diversity and effective population size. Further strategies to adjust the balance of economic cost, fishing effort and ideal number of shrimp spawners to maintain a satisfactory effective population size for ensuring the sustainability of Chinese shrimp are proposed.展开更多
Unbalanced parental contribution and small effective population size (Ne) are common issues during the artificial breeding of marine bivalves. The impact of hatchery-spawning practices on parental contribution, effe...Unbalanced parental contribution and small effective population size (Ne) are common issues during the artificial breeding of marine bivalves. The impact of hatchery-spawning practices on parental contribution, effective population size, the Ne/Nratio, and genetic diversity are largely unknown. To address this, we conducted a parentage analysis on a complete 3×3 diallel cross of clam Meretrix meretrix using eight microsatellite markers. The genetic diversity of the parents was higher than that of their respective offspring in most crosses (8/9). Sires or dams from the same family contributed unequally to the pool of offspring from a particular cross, and the same parent clam exhibited large variation in parental contribution among different crosses. The variance in male contribution was higher than that of the female contribution in most crosses, suggesting that male contribution was more skewed than for females. The No/N ratio for nine crosses ranged from 0.58 to 0.86. There was no linear relationship between the sex ratio and the Ne/Nratio (P〉0.05). Moreover, a sex ratio closer to one-to-one does not necessarily mean a larger effective population size. A solution to small effective population size in commercial breeding programs is increasing broodstoek numbers and attempting to maintain a balanced sex ratio.展开更多
Severe population declines can reduce species to small populations, offering permissive conditions for deleterious processes. For example, following such events, species can become prone to inbreeding and genetic drif...Severe population declines can reduce species to small populations, offering permissive conditions for deleterious processes. For example, following such events, species can become prone to inbreeding and genetic drift which can lead to a loss of genetic diversity and evolutionary potentials. Hynobius chinensis is a poorly studied very rare and declining endangered amphibian species endemic to China in Changyang County. We investigated adult census population size by monitoring breeding populations from 2015 to 2018, developed microsatellite markers from the transcriptome and used them to investigate genetic diversity, and a population bottleneck in this species. We found H. chinensis in 4 different localities in a total area of 2.18 km^2 and estimated the overall adult census population size at 386–404 individuals. The adult census size(mean ± SE) per breeding pond ranged from 44 ± 6 to 141 ± 8 individuals and appeared smaller than that reported in closely related species in undisturbed habitats. We developed and characterized 13 microsatellite markers in total. Analysis of data at 7 loci(N = 118) in Hardy-Weinberg equilibrium gathered from the largest population showed that genetic diversity level was low. The average number of alleles per locus was 2.14. The observed and expected heterozygosities averaged 0.38 and 0.40, respectively. The inbreeding coefficient was –0.06. All tests performed to investigate a population bottleneck, i.e. The Garza-Williamson test, Heterozygosity excess test, Mode shift test of allele frequency, and effective population size estimates detected a population bottleneck. The contemporary and the historical effective population sizes were estimated at 36 and 234 individuals, respectively. We argue that as bottleneck effects, the studied population may have become prone to genetic drift and inbreeding, losing microsatellite alleles and heterozygosity. Our results suggest that populations of H. chinensismay have been extirpated in the study area.展开更多
A newly proposed competent population-based optimization algorithm called RUN,which uses the principle of slope variations calculated by applying the Runge Kutta method as the key search mechanism,has gained wider int...A newly proposed competent population-based optimization algorithm called RUN,which uses the principle of slope variations calculated by applying the Runge Kutta method as the key search mechanism,has gained wider interest in solving optimization problems.However,in high-dimensional problems,the search capabilities,convergence speed,and runtime of RUN deteriorate.This work aims at filling this gap by proposing an improved variant of the RUN algorithm called the Adaptive-RUN.Population size plays a vital role in both runtime efficiency and optimization effectiveness of metaheuristic algorithms.Unlike the original RUN where population size is fixed throughout the search process,Adaptive-RUN automatically adjusts population size according to two population size adaptation techniques,which are linear staircase reduction and iterative halving,during the search process to achieve a good balance between exploration and exploitation characteristics.In addition,the proposed methodology employs an adaptive search step size technique to determine a better solution in the early stages of evolution to improve the solution quality,fitness,and convergence speed of the original RUN.Adaptive-RUN performance is analyzed over 23 IEEE CEC-2017 benchmark functions for two cases,where the first one applies linear staircase reduction with adaptive search step size(LSRUN),and the second one applies iterative halving with adaptive search step size(HRUN),with the original RUN.To promote green computing,the carbon footprint metric is included in the performance evaluation in addition to runtime and fitness.Simulation results based on the Friedman andWilcoxon tests revealed that Adaptive-RUN can produce high-quality solutions with lower runtime and carbon footprint values as compared to the original RUN and three recent metaheuristics.Therefore,with its higher computation efficiency,Adaptive-RUN is a much more favorable choice as compared to RUN in time stringent applications.展开更多
The Cosmonaut Sea is one of the less studied ecosystems in the Southern Hemisphere.Unlike other seas which were near to coastal regions,however,few studies exist on the top predators in this zone.From December 2019 to...The Cosmonaut Sea is one of the less studied ecosystems in the Southern Hemisphere.Unlike other seas which were near to coastal regions,however,few studies exist on the top predators in this zone.From December 2019 to January 2020,a survey of seabirds was carried out on the board icebreaker R/V Xuelong 2 in the Cosmonaut Sea and the Cooperation Sea.Twenty-three bird species were recorded.Antarctic petrel(Thalassoica antarctica),Antarctic prion(Pachyptila desolata),and Arctic tern(Sterna paradisaea)were the most abundant species.A total of about 37500 birds belonging to 23 species were recorded.Around 23%of the region had no record of birds.A large number of birds was recorded in 39°E-40°E,44°E-46°E and 59°E-60°E.Many areas,such as 33°E-35°E,39°E-41°E,44°E-46°E and 59°E-60°E show a great richness.More than two-thirds of seabirds(71%)were observed in the zone near the ocean front.The prediction of the distributions of the most dominant species Antarctic petrel also showed that the area near the ocean front region had an important ecological significance for seabirds.The results suggest that the distribution of seabirds in the Cosmonaut Sea is highly heterogenous.展开更多
Considering the increased anthropogenic impacts,species with a limited range and low detectability often lack fundamental information and conservation actions,placing them at a high risk of endangerment.The Chinting a...Considering the increased anthropogenic impacts,species with a limited range and low detectability often lack fundamental information and conservation actions,placing them at a high risk of endangerment.The Chinting alpine toad Scutiger chintingensis is a rare mountain amphibian endemic to the eastern margin of the Qinghai-Xizang Plateau in China.Within its whole distribution range,only three known populations(Wolong,Emei,and Wawu)exist and no recent population status report has been documented for this species over the past two decades.From 2020 to 2023,we investigated the species distribution,and assessed the risk factors for the main populations.We recorded this species in all distribution areas,and updated a new distribution site with a lower elevation limit.The relative population density was 0.024±0.012 ind./m^(2)on Mount Emei,whereas only 0.008±0.017 ind./m^(2)on Mount Wawu.No significant difference was observed in the number of individuals between the two populations;however,the relative population density was significantly different.Sewage and waste discharge resulting from the construction of scenic areas,as well as disturbances from tourism,were the primary anthropogenic factors that influenced the survival of this species.Our results provide the updated information on the distribution and population status of the Chinting alpine toad,and suggest that unrecorded populations,as well as a wider elevation range,may exist for this species.Our findings emphasise the importance of timely updates of species distribution and population information and offer a basis for the future conservation of endangered amphibians.展开更多
In order to measure the impact of changes in the marsh on breeding Red-crowned Cranes (Grus japonensis) and White-naped Cranes (G.vipio) in the Sanjiang Plain,we conducted a complete crane súrvey in each of the s...In order to measure the impact of changes in the marsh on breeding Red-crowned Cranes (Grus japonensis) and White-naped Cranes (G.vipio) in the Sanjiang Plain,we conducted a complete crane súrvey in each of the summers of 2007 and 2008,and obtained information on the changes in its marsh through interpretation of satellite images in 1986,1995,2000 and 2005.A comparison between the 1984 and 2008 census shows that:1) the number of Red-crowned Cranes remained stable at about 300 birds,while the number of White-naped Cranes increased markedly; 2) the estimates of nests of Red-crowned cranes are close to the numbers of 1984,while approximately 90% of the nests of these two crane species were distributed over five national nature reserves (NNRs); 3) the two crane species became more concentrated in three regions,i.e.,the Fuyuan Delta,the middle reaches of the Naoli and Qixing rivers,and the Xingkai Lake wetlands,rather as formerly in six regions.The area of the marsh decreased by 45% within the 20-year period from 1986 to 2005.The major loss of the marsh area was in the form of a conversion to paddy fields and dry land,which can be primarily attributed to direct human activity under various economic and policy drivers.The disappearance of cranes in the Dulu and Abuqin rivers was induced by large-scale agricultural development.The fragmentation into and isolation of small areas of the marsh became increasingly more serious,which resulted in unsuitable condtions for crane breeding in small patches of the marsh.The number of cranes declined from 1984-1995 but had recovered remarkably by 2008,which may be due to theestablishment of a system of nature reserves,in place since 2000.The land ownership of the reserve plays a key role in maintaining the integrity of the wetland ecosystem,especially in Sanjiang,Honghe,Naolihe and Qixinghe NNRs,which together accommodated approximately 80% of the population of cranes.However,we did not discover any nests at all in the provincial and municipal reserves,which may be attributed to high human disturbances in these areas.In the end,we propose some recommendations on reserve management.展开更多
The Xinjiang Ground Jay (Podoces biddulphi) is a bird species endemic to China. It has a restricted range, living only in the Taklimakan Desert, southern part of Xinjiang. So far, little information has been known of ...The Xinjiang Ground Jay (Podoces biddulphi) is a bird species endemic to China. It has a restricted range, living only in the Taklimakan Desert, southern part of Xinjiang. So far, little information has been known of the status and ecology of the bird in the world. Since 1988, I have been taking field investigations on the distribution, population size and breeding ecology of the Xinjiang Ground Jay in the desert.In this thesis, the desertification in relation to the eastward expansion of the ground jays was discussed.展开更多
The wolverine, Gulogulo, is an endangered species in China. This is the first report of the overall status of wolverines in China. The geographic distribution and population sizes of wolverines in the Greater Khingan ...The wolverine, Gulogulo, is an endangered species in China. This is the first report of the overall status of wolverines in China. The geographic distribution and population sizes of wolverines in the Greater Khingan and Altai Mountains were surveyed by line transect from1996–2000 and in 2011, respectively. We identified two geographically distinct groups in the Great Khingan Mountains, with a total population size of about 200 individuals throughout the region(approximately80,000 km^2). Wolverines were also confirmed to be present in the Altai Mountains, where about 100 individuals occupied approximately 28,000 km^2 of mountain forest and tundra. Prey depletion and habitat loss, which are correlated with increasing human activities, are the main reasons for wolverine population declines in China.展开更多
The Black-necked Crane (Grus nigricollis) is an endemic species of the Qinghai-Tibetan Plateau,with its population in Xinjiang largely found in the Kunlun and Altun mountain regions.A survey of the distribution,popula...The Black-necked Crane (Grus nigricollis) is an endemic species of the Qinghai-Tibetan Plateau,with its population in Xinjiang largely found in the Kunlun and Altun mountain regions.A survey of the distribution,population dynamics,flock size and behavior was conducted in Altun Mountain National Natural Reserve from September to November 2011.We investigated the size and distribution of its population in this area with a sample spot survey and by direct counting.We found Black-necked Cranes on the wetlands of Wuzunxiaoer,Yusup Aleksei,Yaziquan,Qimantag,Tula Ranch and elsewhere,where we recorded 126 individual birds of the species in Yixiekepati (37° 15′-37°23′N,90°11′-90°20′E,elevation 3903 m),the largest population we have observed in this area.In the reserve,the population consists of about 180-200 birds.Combined with previous records,we conclude that more than 260 Black-necked Cranes live in Xinjiang.Cranes gathered conspicuously in the middle of October where the highest number of birds appeared on 29 October.All of the cranes had migrated out of this area by 6 November.Time budgets and diurnal behavior rhythms of Blacknecked Cranes were observed in the Yixiekepati wetland at daylight (from 06:00 to 18:00).Foraging was the most prevalent type of behavior during the autumn period,accounting for 58.9% of the diurnal time budget,followed by preening (13.2%),vigilance (9.5%),walking (8.2%),flying (3.5%),resting (3.4%),chirping (2.7%) and other types of behavior (0.6%).展开更多
Genomic selection(GS) as a promising molecular breeding strategy has been widely implemented and evaluated for plant breeding, because it has remarkable superiority in enhancing genetic gain, reducing breeding time an...Genomic selection(GS) as a promising molecular breeding strategy has been widely implemented and evaluated for plant breeding, because it has remarkable superiority in enhancing genetic gain, reducing breeding time and expenditure, and accelerating the breeding process. In this study the factors affecting prediction accuracy(rMG) in GS were evaluated systematically, using six agronomic traits(plant height, ear height, ear length, ear diameter,grain yield per plant and hundred-kernel weight) evaluated in one natural and two biparental populations. The factors examined included marker density, population size, heritability,statistical model, population relationships and the ratio of population size between the training and testing sets, the last being revealed by resampling individuals in different proportions from a population. Prediction accuracy continuously increased as marker density and population size increased and was positively correlated with heritability; rMGshowed a slight gain when the training set increased to three times as large as the testing set. Low predictive performance between unrelated populations could be attributed to different allele frequencies, and predictive ability and prediction accuracy could be improved by including more related lines in the training population. Among the seven statistical models examined, including ridge regression best linear unbiased prediction(RR-BLUP), genomic BLUP(GBLUP), Bayes A, Bayes B, Bayes C, Bayesian least absolute shrinkage and selection operator(Bayesian LASSO), and reproducing kernel Hilbert space(RKHS), the RKHS and additive-dominance model(Add + Dom model) showed credible ability for capturing non-additive effects, particularly for complex traits with low heritability. Empirical evidence generated in this study for GS-relevant factors will help plant breeders to develop GS-assisted breeding strategies for more efficient development of varieties.展开更多
The SEIR epidemic model studied here includes constant inflows of new susceptibles, exposeds, infectives, and recovereds. This model also incorporates a population size dependent contact rate and a disease-related dea...The SEIR epidemic model studied here includes constant inflows of new susceptibles, exposeds, infectives, and recovereds. This model also incorporates a population size dependent contact rate and a disease-related death. As the infected fraction cannot be eliminated from the population, this kind of model has only the unique endemic equilibrium that is globally asymptotically stable. Under the special case where the new members of immigration are all susceptible, the model considered here shows a threshold phenomenon and a sharp threshold has been obtained. In order to prove the global asymptotical stability of the endemic equilibrium, the authors introduce the change of variable, which can reduce our four-dimensional system to a three-dimensional asymptotical autonomous system with limit equation.展开更多
Global warming is recently an urgent issue worldwide. The increase of carbon emissions induced by human economic activi- ties has become a major driving force behind global climate change. Thus, as a matter of social ...Global warming is recently an urgent issue worldwide. The increase of carbon emissions induced by human economic activi- ties has become a major driving force behind global climate change. Thus, as a matter of social responsibility, reasonable carbon con- straints should be implemented to ensure environmental security and sustainable development for every country. Based on a summary of studies that examined the relationship between carbon emissions and regional development, this paper shows that human activity-led carbon emission is caused by the combination of several influencing factors, including population size, income level, and technical pro- gress. Thus, a quantitative model derived from IPAT-ImPACT-Kaya series and STIRPAT models was established. Empirical analysis using multivariate nonlinear regression demonstrated that the origins of growing global carbon emission included the increasing influ- encing elasticity of the population size and the declining negative effect of technical progress. Meanwhile, in context of classification of country groups at different income levels, according to the comparison of fluctuating patterns of the influencing elasticity, technical progress was found as the main factor influencing carbon emission levels in high-income countries, and population size might he the controlling factor in middle-income countries. However, for low-income countries, the nonlinear relationship between carbon emission and its influencing factors was not significant, whereas population growth was identified as an important potential driving force in future carbon emissions. This study can therefore provide a reference for the formulation of policies on carbon constraints, especially to de- velop more efficient carbon mitigating policies for countries at different income levels.展开更多
Based on Remote Sensing (RS) and Geographical Information System (GIS) technology,urban expansion of 75 cities in China from the 1970s to 2020 was reconstructed by visual-interpretation method,which described the grow...Based on Remote Sensing (RS) and Geographical Information System (GIS) technology,urban expansion of 75 cities in China from the 1970s to 2020 was reconstructed by visual-interpretation method,which described the growing process of urban lands and its influences on local land use structures synchronously.By employing annual expansion area per city and urban expansion density,spatial-temporal characteristics and macro patterns of urban expansion were analyzed from the aspects of regional-distributions,administrative-levels and population-sizes comprehensively.Results indicate that:1) urban expansion in China was universal,distinct,persistent,periodic and fluctuating.In the past five decades,urban lands of 75 monitored cities in China expanded dramatically from 3606.26 km2 to 30 521.13 km2.2) Though urban expansion presented significant differences from the aspects of regional distribution,administrative levels,and population sizes,it exhibited a deceleration trend in the 13th Five-Year Plan among all kinds of cities.3) Cultivated lands were the first land resource for urban expansion,and 55.17% of newly-expanded urban lands appeared by encroaching this land use type.China’s urban expansion has caused sustained pressure on cultivated land protection,especially in super megacities,and the contradiction between urban expansion and cultivated land protection will always exist.4) The compactness of urban lands in China increased before 1987 and reduced in the next three decades,which was consistent with the implementation of major policies and the deployment of national strategies,and is expected to become compact with a stopping declining or even rebounding after the 13th Five-Year Plan.展开更多
Using total counts in simultaneous annual surveys, we monitored the population size and spatial distribution of oriental white storks (Ciconia boyciana) wintering in Poyang Lake between 1998 and 2011. Results showed...Using total counts in simultaneous annual surveys, we monitored the population size and spatial distribution of oriental white storks (Ciconia boyciana) wintering in Poyang Lake between 1998 and 2011. Results showed that Poyang Lake wetland is an important wintering ground for oriental white storks, with an annual average population number of 2 305+326. The population sizes in 2004, 2005, 2010, and 2011 were higher than the highest-ever estimate of its global population. In 2005, we recorded 3 789 individuals, which was the maximum population number within the period of 1998-2011. The storks inhabited 52 lakes, with the greatest distance between these lakes being 180.3 km. The storks presented a clustered distribution pattern in the Poyang Lake wetland, irrespective of the number of individuals or occurrence frequencies. Shahu, Dahuchi, Banghu, and Hanchihu were most frequently used lakes and had the largest annual average numbers of storks. There was a significant positive correlation between occurrence frequency and annual average number of storks in the lakes. Most of the lakes important for storks were covered by existing nature reserves, though some lakes outside the reserves were also frequently used. About 64.9%+ 5.5% of the storks were found in nature reserves. In addition, the storks more frequently used and clumped in significantly larger flocks in lakes within nature reserves than lakes outside.展开更多
Aims small plant populations may be more likely to suffer more severe pollen limitation due to the lower number of potential mates or suitable pollinators.For invasive species,this phenomenon may be more common when a...Aims small plant populations may be more likely to suffer more severe pollen limitation due to the lower number of potential mates or suitable pollinators.For invasive species,this phenomenon may be more common when an invading population colonizes a new habitat.Here,we investigated whether pollen limitation occurs in invasive populations of Solanum rostratum during its invasion from North america to China and evaluated the patterns between pollen limitation and population size.Methods Pollen addition experiments were performed on six invasive populations of S.rostratum.by comparing fruit set and seed production with open pollination treatment,we calculated the index of pollen limitation and regressed it to population size and density.Important Findingsamong the six sampled invasive populations of S.rostratum,the fruit set and seed production per fruit were 0.346±0.014 and 52.38±9.29,respectively,with open pollination treatment and 0.572±0.022 and 56.28±10.79,respectively,with pollen addition treatment.Compared with open pollination,pollen addition significantly increased fruit set and seed production by 65.3 and 7.4%,respectively.The standardized index of pollen limitation ranged from 0.022 to 0.125,with an average of 0.065,suggesting that invasive populations of S.rostratum do suffer from pollen limitation.The index of pollen limitation was negatively correlated with population size,which is consistent with the pattern that smaller populations suffer from more severe pollen limitation.展开更多
To explore the genetic features and signatures of selection in indigenous pigs from South China and Duroc pigs,259 pigs from six populations were genotyped using single-nucleotide polymorphism(SNP)BeadChips.Principal ...To explore the genetic features and signatures of selection in indigenous pigs from South China and Duroc pigs,259 pigs from six populations were genotyped using single-nucleotide polymorphism(SNP)BeadChips.Principal component analysis(PCA),effective population size(Ne),linkage disequilibrium(LD),and signatures of selection were explored and investigated among the six pig populations.The results showed the Ne of five South China indigenous pig populations has been decreasing rapidly since 100 generations ago.The LD between pairwise SNP distance at 100 kb ranged from 0.16 to 0.20 for the five indigenous pig populations,while it was 0.32 for the Duroc population.However,the LD of all six pig populations showed the opposite order at long distances(>5 Mb).Furthermore,15 potential signatures of selection associated with meat quality and age at puberty were exclusively detected in South China indigenous pigs,while eight potential signatures of selection associated with growth traits were detected in Duroc pigs.Our work provides valuable insights for the utilization and conservation of South China indigenous pigs.展开更多
Abstract Four successive mass selection lines of the Pacific oyster, Crassostrea gigas, selected for faster growth in breeding pro- grams in China were examined at ten polymorphic microsatellite loci to assess the lev...Abstract Four successive mass selection lines of the Pacific oyster, Crassostrea gigas, selected for faster growth in breeding pro- grams in China were examined at ten polymorphic microsatellite loci to assess the level of allelic diversity and estimate the effective population size. These data were compared with those of their base population. The results showed that the genetic variation of the four generations were maintained at high levels with an average allelic richness of 18.8-20.6, and a mean expected heterozygosity of 0.902-0.921. They were not reduced compared with those of their base population. Estimated effective population sizes based on temporal variances in microsatellite frequencies were smaller to that of sex ratio-corrected broodstock count estimates. Using a rela- tively large number ofbroodstock and keeping an equal sex ratio in the broodstock each generation may have contributed to retaining the original genetic diversity and maintaining relatively large effective population size. The results obtained in this study showed that the genetic variation was not affected greatly by mass selection progress and high genetic variation still existed in the mass selection lines, suggesting that there is still potential for increasing the gains in future generations of C. gigas. The present study provided im- portant information for future genetic improvement by selective breeding, and for the design of suitable management guidelines for genetic breeding of C. gigas.展开更多
基金The Basic Scientific Research Operation Fee of the Third Institute of Oceanography,the Ministry of Natural Resources under contract No.2018006the project of the Chinese Arctic and Antarctic Administration of the State Oceanic Administration under contract No.CHINARE2016-03-02the Shandong Provincial Natural Science Foundation under contract No.ZR2019BD054。
文摘The grain size distribution of bulk sediment samples was decomposed in a core to reconstruct paleoceanographic evolution over the past 60 ka in the northern Norwegian Sea.The results show that sediments consisted of 3–4 grain populations derived from the North Atlantic Current(NAC)and Barents Ice Sheet(BIS).The grain size data suggest three palaeoceanographic evolution stages:(1)an environment affected by BIS and NAC and changed with the interstadial/stadial transition in phase with the Greenland ice-core record at 60–31 ka BP,during which discharge of icebergs and the content of the coarsest population containing ice-rafted debris(IRD)in the sediments increased significantly during stadial,while the fine silt population containing volcanic glasses increased with the enhancement of NAC during the interstadial;(2)an extreme environment controlled by BIS at31–13 ka BP.BIS reached to its maximum at about 31 ka BP and the turbid plumes that formed at the leading edge of BIS contributed to a significant increase in the clayey population in sediments.Icebergs drained into the northern Norwegian Sea with periodical calving of the BIS at 31–19 ka BP.Subsequently,the ablation of the BIS discharged massive floods with clayey sediments and icebergs into the Norwegian Sea at 19–13 ka BP,resulting in a constant increase in clay and IRD in sediments;and(3)a marine environment similar to the present one under the strong influence of NAC following the complete melting of the BIS after 13 ka BP,NAC is the dominant transport agent and no IRD occurred in sediments.The fine silt populations containing volcanic glasses transported by NAC significantly increased.
基金This study was supported by the Project of Scientific Innovation of the Chinese Academy of Sciences under contract No.ZKCX2-211the Science and Technology Plans of Shandong Province under contract No.022110107the Science and Technology Plans of Qingdao under contract No.03-1-HH-10.
文摘In 2002, six cohorts ofbroodstock bay scallop Argopecten irradians irradians (Ne=1, 2, 10, 30, 50 and control) were randomly chosen from a population of bay scallop to produce offspring. After one year rearing, with the progeny matured, the similar experiment was done to produce the F2 generation. To determine the magnitude of Ne effects, the growth and survival rates in larvae and adult of six F2 groups were compared. Results showed that inbreeding depression existed not only in the Ne=1 group but also in the Ne=2 group. The growth and survival rates of the two groups were significantly lower than those of the other groups (Ne=10, 30, 50, control), and there were no significant differences among the latter (P〉0.05). At the same time, the amount of depression in the Ne=1 group was significantly higher than that of the Ne=2 group (P〈0.05). These results indicated that the low effective population size (Ne), which increases the possibility of inbreeding, could lead to some harmful effects on the offspring. So it is essential to maintain a high level of Ne in commercial seed production. Fta'thermore, as the high fecundity of bay scallop might lead to increased inbreeding, selecting broodstock from different growout sites is recommended.
基金The National Basic Research Program of China(973 Program)Adaptive Response of Fishery Species to Environmental Changes and Their Effects on Population Dynamics under contract No.2015CB453303the International Science&Technology Cooperation Program of China under contract No.2013DFA31410
文摘Eight microsatellite markers were used to analyze genetic diversity, level of inbreeding, and effective population size of spawner and recaptured populations of Chinese shrimp(Fenneropenaeus chinensis) during stock enhancement in the Bohai Bay in 2013. A total of 254 and 238 alleles were identified in the spawner and recaptured populations, respectively, and the numbers of alleles(N_a) were 8–63 and 6–60, respectively. The numbers of effective alleles(N_e) were 2.52–21.60 and 2.67–20.72, respectively. The polymorphism information content ranged from 0.529 to 0.952. The observed heterozygosity(H_o) values(0.638–0.910 and 0.712–0.927) were lower than the expected heterozygosity(H_e) values(0.603–0.954 and 0.625–0.952), which indicated that the two populations possessed a rich genetic diversity. In 16 tests(2 populations×8 loci), 13 tests deviated from the HardyWeinberg equilibrium. F_(is) values were positive at seven loci and the inbreeding coefficients(F) of the two populations estimated by trio ML were 13.234% and 11.603%, suggesting that there was a relatively high degree of inbreeding. A certain level of inbreeding depression had occurred in the Chinese shrimp population. F_(st) values ranged from 0 to 0.059, with a mean of 0.028, displaying a low level of genetic differentiation in the two populations. Effective population sizes(3 060.2 and 3 842.8) were higher than the minimum number suggested for retaining the evolutionary potential to adapt to new environmental conditions. For enhancement activity in 2014,the ideal number of captured shrimp spawners should have ranged from 7 686 to 19 214 to maintain genetic diversity and effective population size. Further strategies to adjust the balance of economic cost, fishing effort and ideal number of shrimp spawners to maintain a satisfactory effective population size for ensuring the sustainability of Chinese shrimp are proposed.
基金Supported by the National High Technology Research and Development Program of China(863 Program)(No.2012AA10A410)the Key Technology R&D Program of Jiangsu Province,China(No.BE2011372)
文摘Unbalanced parental contribution and small effective population size (Ne) are common issues during the artificial breeding of marine bivalves. The impact of hatchery-spawning practices on parental contribution, effective population size, the Ne/Nratio, and genetic diversity are largely unknown. To address this, we conducted a parentage analysis on a complete 3×3 diallel cross of clam Meretrix meretrix using eight microsatellite markers. The genetic diversity of the parents was higher than that of their respective offspring in most crosses (8/9). Sires or dams from the same family contributed unequally to the pool of offspring from a particular cross, and the same parent clam exhibited large variation in parental contribution among different crosses. The variance in male contribution was higher than that of the female contribution in most crosses, suggesting that male contribution was more skewed than for females. The No/N ratio for nine crosses ranged from 0.58 to 0.86. There was no linear relationship between the sex ratio and the Ne/Nratio (P〉0.05). Moreover, a sex ratio closer to one-to-one does not necessarily mean a larger effective population size. A solution to small effective population size in commercial breeding programs is increasing broodstoek numbers and attempting to maintain a balanced sex ratio.
基金financially supported by the Chinese National Science and Technology Basic Work Program (No. 2014FY110100)the State Forestry Administration of China
文摘Severe population declines can reduce species to small populations, offering permissive conditions for deleterious processes. For example, following such events, species can become prone to inbreeding and genetic drift which can lead to a loss of genetic diversity and evolutionary potentials. Hynobius chinensis is a poorly studied very rare and declining endangered amphibian species endemic to China in Changyang County. We investigated adult census population size by monitoring breeding populations from 2015 to 2018, developed microsatellite markers from the transcriptome and used them to investigate genetic diversity, and a population bottleneck in this species. We found H. chinensis in 4 different localities in a total area of 2.18 km^2 and estimated the overall adult census population size at 386–404 individuals. The adult census size(mean ± SE) per breeding pond ranged from 44 ± 6 to 141 ± 8 individuals and appeared smaller than that reported in closely related species in undisturbed habitats. We developed and characterized 13 microsatellite markers in total. Analysis of data at 7 loci(N = 118) in Hardy-Weinberg equilibrium gathered from the largest population showed that genetic diversity level was low. The average number of alleles per locus was 2.14. The observed and expected heterozygosities averaged 0.38 and 0.40, respectively. The inbreeding coefficient was –0.06. All tests performed to investigate a population bottleneck, i.e. The Garza-Williamson test, Heterozygosity excess test, Mode shift test of allele frequency, and effective population size estimates detected a population bottleneck. The contemporary and the historical effective population sizes were estimated at 36 and 234 individuals, respectively. We argue that as bottleneck effects, the studied population may have become prone to genetic drift and inbreeding, losing microsatellite alleles and heterozygosity. Our results suggest that populations of H. chinensismay have been extirpated in the study area.
文摘A newly proposed competent population-based optimization algorithm called RUN,which uses the principle of slope variations calculated by applying the Runge Kutta method as the key search mechanism,has gained wider interest in solving optimization problems.However,in high-dimensional problems,the search capabilities,convergence speed,and runtime of RUN deteriorate.This work aims at filling this gap by proposing an improved variant of the RUN algorithm called the Adaptive-RUN.Population size plays a vital role in both runtime efficiency and optimization effectiveness of metaheuristic algorithms.Unlike the original RUN where population size is fixed throughout the search process,Adaptive-RUN automatically adjusts population size according to two population size adaptation techniques,which are linear staircase reduction and iterative halving,during the search process to achieve a good balance between exploration and exploitation characteristics.In addition,the proposed methodology employs an adaptive search step size technique to determine a better solution in the early stages of evolution to improve the solution quality,fitness,and convergence speed of the original RUN.Adaptive-RUN performance is analyzed over 23 IEEE CEC-2017 benchmark functions for two cases,where the first one applies linear staircase reduction with adaptive search step size(LSRUN),and the second one applies iterative halving with adaptive search step size(HRUN),with the original RUN.To promote green computing,the carbon footprint metric is included in the performance evaluation in addition to runtime and fitness.Simulation results based on the Friedman andWilcoxon tests revealed that Adaptive-RUN can produce high-quality solutions with lower runtime and carbon footprint values as compared to the original RUN and three recent metaheuristics.Therefore,with its higher computation efficiency,Adaptive-RUN is a much more favorable choice as compared to RUN in time stringent applications.
基金financially supported by National Polar Special Program “Impact and Response of Antarctic Seas to Climate Change” (Grant nos. IRASCC2020-2022-05, IRASCC2020-2022-06)
文摘The Cosmonaut Sea is one of the less studied ecosystems in the Southern Hemisphere.Unlike other seas which were near to coastal regions,however,few studies exist on the top predators in this zone.From December 2019 to January 2020,a survey of seabirds was carried out on the board icebreaker R/V Xuelong 2 in the Cosmonaut Sea and the Cooperation Sea.Twenty-three bird species were recorded.Antarctic petrel(Thalassoica antarctica),Antarctic prion(Pachyptila desolata),and Arctic tern(Sterna paradisaea)were the most abundant species.A total of about 37500 birds belonging to 23 species were recorded.Around 23%of the region had no record of birds.A large number of birds was recorded in 39°E-40°E,44°E-46°E and 59°E-60°E.Many areas,such as 33°E-35°E,39°E-41°E,44°E-46°E and 59°E-60°E show a great richness.More than two-thirds of seabirds(71%)were observed in the zone near the ocean front.The prediction of the distributions of the most dominant species Antarctic petrel also showed that the area near the ocean front region had an important ecological significance for seabirds.The results suggest that the distribution of seabirds in the Cosmonaut Sea is highly heterogenous.
基金supported by the National Natural Science Foundation of China(32271737,32071544)the Interdisciplinary Innovation Team of the Chinese Academy of Sciences(CAS)“Light of West China”Program(xbzg-zdsys-202207)+1 种基金the Shenzhen Zhilan Foundation(2021070451A)Nature Science Foundation of Sichuan Province(2022NSFSC0125).
文摘Considering the increased anthropogenic impacts,species with a limited range and low detectability often lack fundamental information and conservation actions,placing them at a high risk of endangerment.The Chinting alpine toad Scutiger chintingensis is a rare mountain amphibian endemic to the eastern margin of the Qinghai-Xizang Plateau in China.Within its whole distribution range,only three known populations(Wolong,Emei,and Wawu)exist and no recent population status report has been documented for this species over the past two decades.From 2020 to 2023,we investigated the species distribution,and assessed the risk factors for the main populations.We recorded this species in all distribution areas,and updated a new distribution site with a lower elevation limit.The relative population density was 0.024±0.012 ind./m^(2)on Mount Emei,whereas only 0.008±0.017 ind./m^(2)on Mount Wawu.No significant difference was observed in the number of individuals between the two populations;however,the relative population density was significantly different.Sewage and waste discharge resulting from the construction of scenic areas,as well as disturbances from tourism,were the primary anthropogenic factors that influenced the survival of this species.Our results provide the updated information on the distribution and population status of the Chinting alpine toad,and suggest that unrecorded populations,as well as a wider elevation range,may exist for this species.Our findings emphasise the importance of timely updates of species distribution and population information and offer a basis for the future conservation of endangered amphibians.
基金supported by the Conservation Fund of the State Forestry Administration of China and the Siberian Crane Wetland GEF/UNEP Project(GF/2712-03-4627)
文摘In order to measure the impact of changes in the marsh on breeding Red-crowned Cranes (Grus japonensis) and White-naped Cranes (G.vipio) in the Sanjiang Plain,we conducted a complete crane súrvey in each of the summers of 2007 and 2008,and obtained information on the changes in its marsh through interpretation of satellite images in 1986,1995,2000 and 2005.A comparison between the 1984 and 2008 census shows that:1) the number of Red-crowned Cranes remained stable at about 300 birds,while the number of White-naped Cranes increased markedly; 2) the estimates of nests of Red-crowned cranes are close to the numbers of 1984,while approximately 90% of the nests of these two crane species were distributed over five national nature reserves (NNRs); 3) the two crane species became more concentrated in three regions,i.e.,the Fuyuan Delta,the middle reaches of the Naoli and Qixing rivers,and the Xingkai Lake wetlands,rather as formerly in six regions.The area of the marsh decreased by 45% within the 20-year period from 1986 to 2005.The major loss of the marsh area was in the form of a conversion to paddy fields and dry land,which can be primarily attributed to direct human activity under various economic and policy drivers.The disappearance of cranes in the Dulu and Abuqin rivers was induced by large-scale agricultural development.The fragmentation into and isolation of small areas of the marsh became increasingly more serious,which resulted in unsuitable condtions for crane breeding in small patches of the marsh.The number of cranes declined from 1984-1995 but had recovered remarkably by 2008,which may be due to theestablishment of a system of nature reserves,in place since 2000.The land ownership of the reserve plays a key role in maintaining the integrity of the wetland ecosystem,especially in Sanjiang,Honghe,Naolihe and Qixinghe NNRs,which together accommodated approximately 80% of the population of cranes.However,we did not discover any nests at all in the provincial and municipal reserves,which may be attributed to high human disturbances in these areas.In the end,we propose some recommendations on reserve management.
基金supported by the Science Supporting Project of National Ministry of Science and Technology(2008BAC39B04)the National Natural Science Foundation of China(30270211,30470262,30970340)
文摘The Xinjiang Ground Jay (Podoces biddulphi) is a bird species endemic to China. It has a restricted range, living only in the Taklimakan Desert, southern part of Xinjiang. So far, little information has been known of the status and ecology of the bird in the world. Since 1988, I have been taking field investigations on the distribution, population size and breeding ecology of the Xinjiang Ground Jay in the desert.In this thesis, the desertification in relation to the eastward expansion of the ground jays was discussed.
基金supported by the Rare and Endangered Species Investigation and Monitoring Project of the State Forestry Administration(41309408)the Heilongjiang Academy of Sciences Fund
文摘The wolverine, Gulogulo, is an endangered species in China. This is the first report of the overall status of wolverines in China. The geographic distribution and population sizes of wolverines in the Greater Khingan and Altai Mountains were surveyed by line transect from1996–2000 and in 2011, respectively. We identified two geographically distinct groups in the Great Khingan Mountains, with a total population size of about 200 individuals throughout the region(approximately80,000 km^2). Wolverines were also confirmed to be present in the Altai Mountains, where about 100 individuals occupied approximately 28,000 km^2 of mountain forest and tundra. Prey depletion and habitat loss, which are correlated with increasing human activities, are the main reasons for wolverine population declines in China.
基金supported by the National Natural Science Foundation of China(No.31272291,30970340)the Hong Kong Bird Watching Society China Conservation Fund and the Management Bureau of Altun Mountain Natural Reserve
文摘The Black-necked Crane (Grus nigricollis) is an endemic species of the Qinghai-Tibetan Plateau,with its population in Xinjiang largely found in the Kunlun and Altun mountain regions.A survey of the distribution,population dynamics,flock size and behavior was conducted in Altun Mountain National Natural Reserve from September to November 2011.We investigated the size and distribution of its population in this area with a sample spot survey and by direct counting.We found Black-necked Cranes on the wetlands of Wuzunxiaoer,Yusup Aleksei,Yaziquan,Qimantag,Tula Ranch and elsewhere,where we recorded 126 individual birds of the species in Yixiekepati (37° 15′-37°23′N,90°11′-90°20′E,elevation 3903 m),the largest population we have observed in this area.In the reserve,the population consists of about 180-200 birds.Combined with previous records,we conclude that more than 260 Black-necked Cranes live in Xinjiang.Cranes gathered conspicuously in the middle of October where the highest number of birds appeared on 29 October.All of the cranes had migrated out of this area by 6 November.Time budgets and diurnal behavior rhythms of Blacknecked Cranes were observed in the Yixiekepati wetland at daylight (from 06:00 to 18:00).Foraging was the most prevalent type of behavior during the autumn period,accounting for 58.9% of the diurnal time budget,followed by preening (13.2%),vigilance (9.5%),walking (8.2%),flying (3.5%),resting (3.4%),chirping (2.7%) and other types of behavior (0.6%).
基金supported by the National Basic Research Program of China(2014 CB138206)National Key Research and Development Program of China(2016YFD0101803)+3 种基金the National Natural Science Foundation of China-CGIAR International Collaborative Program(31361140364)the Agricultural Science and Technology Innovation Program(ASTIP)of CAASFundamental Research Funds for Central Non-Profit of Institute of Crop Sciences,CAAS(1610092016124)supported by the Bill and Melinda Gates Foundation and the CGIAR Research Program MAIZE
文摘Genomic selection(GS) as a promising molecular breeding strategy has been widely implemented and evaluated for plant breeding, because it has remarkable superiority in enhancing genetic gain, reducing breeding time and expenditure, and accelerating the breeding process. In this study the factors affecting prediction accuracy(rMG) in GS were evaluated systematically, using six agronomic traits(plant height, ear height, ear length, ear diameter,grain yield per plant and hundred-kernel weight) evaluated in one natural and two biparental populations. The factors examined included marker density, population size, heritability,statistical model, population relationships and the ratio of population size between the training and testing sets, the last being revealed by resampling individuals in different proportions from a population. Prediction accuracy continuously increased as marker density and population size increased and was positively correlated with heritability; rMGshowed a slight gain when the training set increased to three times as large as the testing set. Low predictive performance between unrelated populations could be attributed to different allele frequencies, and predictive ability and prediction accuracy could be improved by including more related lines in the training population. Among the seven statistical models examined, including ridge regression best linear unbiased prediction(RR-BLUP), genomic BLUP(GBLUP), Bayes A, Bayes B, Bayes C, Bayesian least absolute shrinkage and selection operator(Bayesian LASSO), and reproducing kernel Hilbert space(RKHS), the RKHS and additive-dominance model(Add + Dom model) showed credible ability for capturing non-additive effects, particularly for complex traits with low heritability. Empirical evidence generated in this study for GS-relevant factors will help plant breeders to develop GS-assisted breeding strategies for more efficient development of varieties.
基金This research is supported by the NNSF of China (19971066)
文摘The SEIR epidemic model studied here includes constant inflows of new susceptibles, exposeds, infectives, and recovereds. This model also incorporates a population size dependent contact rate and a disease-related death. As the infected fraction cannot be eliminated from the population, this kind of model has only the unique endemic equilibrium that is globally asymptotically stable. Under the special case where the new members of immigration are all susceptible, the model considered here shows a threshold phenomenon and a sharp threshold has been obtained. In order to prove the global asymptotical stability of the endemic equilibrium, the authors introduce the change of variable, which can reduce our four-dimensional system to a three-dimensional asymptotical autonomous system with limit equation.
基金Under the auspices of Major State Basic Research Development Program of China(No.2012CB955802)National Natural Science Foundation of China(No.41171099)Strategy of Public Participation of Low Carbon Development in China(No.201315)
文摘Global warming is recently an urgent issue worldwide. The increase of carbon emissions induced by human economic activi- ties has become a major driving force behind global climate change. Thus, as a matter of social responsibility, reasonable carbon con- straints should be implemented to ensure environmental security and sustainable development for every country. Based on a summary of studies that examined the relationship between carbon emissions and regional development, this paper shows that human activity-led carbon emission is caused by the combination of several influencing factors, including population size, income level, and technical pro- gress. Thus, a quantitative model derived from IPAT-ImPACT-Kaya series and STIRPAT models was established. Empirical analysis using multivariate nonlinear regression demonstrated that the origins of growing global carbon emission included the increasing influ- encing elasticity of the population size and the declining negative effect of technical progress. Meanwhile, in context of classification of country groups at different income levels, according to the comparison of fluctuating patterns of the influencing elasticity, technical progress was found as the main factor influencing carbon emission levels in high-income countries, and population size might he the controlling factor in middle-income countries. However, for low-income countries, the nonlinear relationship between carbon emission and its influencing factors was not significant, whereas population growth was identified as an important potential driving force in future carbon emissions. This study can therefore provide a reference for the formulation of policies on carbon constraints, especially to de- velop more efficient carbon mitigating policies for countries at different income levels.
基金Under the auspices of the National Key R&D Program of China (No. 2017YFE0104600)。
文摘Based on Remote Sensing (RS) and Geographical Information System (GIS) technology,urban expansion of 75 cities in China from the 1970s to 2020 was reconstructed by visual-interpretation method,which described the growing process of urban lands and its influences on local land use structures synchronously.By employing annual expansion area per city and urban expansion density,spatial-temporal characteristics and macro patterns of urban expansion were analyzed from the aspects of regional-distributions,administrative-levels and population-sizes comprehensively.Results indicate that:1) urban expansion in China was universal,distinct,persistent,periodic and fluctuating.In the past five decades,urban lands of 75 monitored cities in China expanded dramatically from 3606.26 km2 to 30 521.13 km2.2) Though urban expansion presented significant differences from the aspects of regional distribution,administrative levels,and population sizes,it exhibited a deceleration trend in the 13th Five-Year Plan among all kinds of cities.3) Cultivated lands were the first land resource for urban expansion,and 55.17% of newly-expanded urban lands appeared by encroaching this land use type.China’s urban expansion has caused sustained pressure on cultivated land protection,especially in super megacities,and the contradiction between urban expansion and cultivated land protection will always exist.4) The compactness of urban lands in China increased before 1987 and reduced in the next three decades,which was consistent with the implementation of major policies and the deployment of national strategies,and is expected to become compact with a stopping declining or even rebounding after the 13th Five-Year Plan.
基金supported by the National Natural Science Foundation of China(31460107)Siberian Crane Wetland Project-ChinaConstruction Office of Poyang Lake Water Control Project of Jiangxi Province(KT201401)
文摘Using total counts in simultaneous annual surveys, we monitored the population size and spatial distribution of oriental white storks (Ciconia boyciana) wintering in Poyang Lake between 1998 and 2011. Results showed that Poyang Lake wetland is an important wintering ground for oriental white storks, with an annual average population number of 2 305+326. The population sizes in 2004, 2005, 2010, and 2011 were higher than the highest-ever estimate of its global population. In 2005, we recorded 3 789 individuals, which was the maximum population number within the period of 1998-2011. The storks inhabited 52 lakes, with the greatest distance between these lakes being 180.3 km. The storks presented a clustered distribution pattern in the Poyang Lake wetland, irrespective of the number of individuals or occurrence frequencies. Shahu, Dahuchi, Banghu, and Hanchihu were most frequently used lakes and had the largest annual average numbers of storks. There was a significant positive correlation between occurrence frequency and annual average number of storks in the lakes. Most of the lakes important for storks were covered by existing nature reserves, though some lakes outside the reserves were also frequently used. About 64.9%+ 5.5% of the storks were found in nature reserves. In addition, the storks more frequently used and clumped in significantly larger flocks in lakes within nature reserves than lakes outside.
基金This work was supported by the National Natural Science Foundation of China(31270462).
文摘Aims small plant populations may be more likely to suffer more severe pollen limitation due to the lower number of potential mates or suitable pollinators.For invasive species,this phenomenon may be more common when an invading population colonizes a new habitat.Here,we investigated whether pollen limitation occurs in invasive populations of Solanum rostratum during its invasion from North america to China and evaluated the patterns between pollen limitation and population size.Methods Pollen addition experiments were performed on six invasive populations of S.rostratum.by comparing fruit set and seed production with open pollination treatment,we calculated the index of pollen limitation and regressed it to population size and density.Important Findingsamong the six sampled invasive populations of S.rostratum,the fruit set and seed production per fruit were 0.346±0.014 and 52.38±9.29,respectively,with open pollination treatment and 0.572±0.022 and 56.28±10.79,respectively,with pollen addition treatment.Compared with open pollination,pollen addition significantly increased fruit set and seed production by 65.3 and 7.4%,respectively.The standardized index of pollen limitation ranged from 0.022 to 0.125,with an average of 0.065,suggesting that invasive populations of S.rostratum do suffer from pollen limitation.The index of pollen limitation was negatively correlated with population size,which is consistent with the pattern that smaller populations suffer from more severe pollen limitation.
基金the National Key R&D Program of China(2018YFD0501200)the earmarked fund for China Agriculture Research System(CARS-35)the Key R&D Program of Guangdong Province,China(2018B020203003)。
文摘To explore the genetic features and signatures of selection in indigenous pigs from South China and Duroc pigs,259 pigs from six populations were genotyped using single-nucleotide polymorphism(SNP)BeadChips.Principal component analysis(PCA),effective population size(Ne),linkage disequilibrium(LD),and signatures of selection were explored and investigated among the six pig populations.The results showed the Ne of five South China indigenous pig populations has been decreasing rapidly since 100 generations ago.The LD between pairwise SNP distance at 100 kb ranged from 0.16 to 0.20 for the five indigenous pig populations,while it was 0.32 for the Duroc population.However,the LD of all six pig populations showed the opposite order at long distances(>5 Mb).Furthermore,15 potential signatures of selection associated with meat quality and age at puberty were exclusively detected in South China indigenous pigs,while eight potential signatures of selection associated with growth traits were detected in Duroc pigs.Our work provides valuable insights for the utilization and conservation of South China indigenous pigs.
基金supported by grants from the National High Technology Research and Development Program (2012AA10A405-6)National Natural Science Foundation of China (31372524)Special Fund for Independent Innovation of Shandong Province (2013CX80202)
文摘Abstract Four successive mass selection lines of the Pacific oyster, Crassostrea gigas, selected for faster growth in breeding pro- grams in China were examined at ten polymorphic microsatellite loci to assess the level of allelic diversity and estimate the effective population size. These data were compared with those of their base population. The results showed that the genetic variation of the four generations were maintained at high levels with an average allelic richness of 18.8-20.6, and a mean expected heterozygosity of 0.902-0.921. They were not reduced compared with those of their base population. Estimated effective population sizes based on temporal variances in microsatellite frequencies were smaller to that of sex ratio-corrected broodstock count estimates. Using a rela- tively large number ofbroodstock and keeping an equal sex ratio in the broodstock each generation may have contributed to retaining the original genetic diversity and maintaining relatively large effective population size. The results obtained in this study showed that the genetic variation was not affected greatly by mass selection progress and high genetic variation still existed in the mass selection lines, suggesting that there is still potential for increasing the gains in future generations of C. gigas. The present study provided im- portant information for future genetic improvement by selective breeding, and for the design of suitable management guidelines for genetic breeding of C. gigas.