Dynamic changes of rumen microbiota and serum metabolome revealed increases in meat quality and growth performances of sheep fed bio‑fermented rice straw

Background Providing high-quality roughage is crucial for improvement of ruminant production because it is an essential component of their feed.Our previous study showed that feeding bio-fermented rice straw(BF)improved the feed intake and weight gain of sheep.However,it remains unclear why feeding BF to sheep increased their feed intake and weight gain.Therefore,the purposes of this research were to investigate how the rumen micro-biota and serum metabolome are dynamically changing after feeding BF,as well as how their changes influence the feed intake,digestibility,nutrient transport,meat quality and growth performances of sheep.Twelve growing Hu sheep were allocated into 3 groups:alfalfa hay fed group(AH:positive control),rice straw fed group(RS:negative control)and BF fed group(BF:treatment).Samples of rumen content,blood,rumen epithelium,muscle,feed offered and refusals were collected for the subsequent analysis.Results Feeding BF changed the microbial community and rumen fermentation,particularly increasing(P<0.05)relative abundance of Prevotella and propionate production,and decreasing(P<0.05)enteric methane yield.The histomorphology(height,width,area and thickness)of rumen papillae and gene expression for carbohydrate trans-port(MCT1),tight junction(claudin-1,claudin-4),and cell proliferation(CDK4,Cyclin A2,Cyclin E1)were improved(P<0.05)in sheep fed BF.Additionally,serum metabolome was also dynamically changed,which led to up-regulating(P<0.05)the primary bile acid biosynthesis and biosynthesis of unsaturated fatty acid in sheep fed BF.As a result,the higher(P<0.05)feed intake,digestibility,growth rate,feed efficiency,meat quality and mono-unsaturated fatty acid concentration in muscle,and the lower(P<0.05)feed cost per kg of live weight were achieved by feeding BF.Conclusions Feeding BF improved the growth performances and meat quality of sheep and reduced their feed cost.Therefore,bio-fermentation of rice straw could be an innovative way for improving ruminant production with mini-mizing production costs.

Effects of Biostimulant NEAU10 on Growth of Rice Seedlings and Soil Physicochemical Parameters

The process of rice(Oryza sativa L.)seedling cultivation is often subjected to adverse environmental stress.Biostimulants regulate the robust growth of rice seedlings and play a crucial role in promoting the green and ecological development of agriculture.In this study,1.0 and 2.0 g•m^(-2) of the biostimulant were applied to soil in rice seedbeds.Growth indicators of rice,antioxidant enzyme activities and soil physicochemical characteristics were assessed at the 2.5-leaf and 4-leaf stages of rice.The results indicated that applying 2.0 g•m^(-2) of the biostimulant at both the 2.5-leaf and 4-leaf stages had the most significant promoting effect on rice growth.At the 2.5-leaf and 4-leaf stages,the number of fibrous roots increased by 23.43%and 22.25%,stem base width increased by 19.05%and 19.58%,above ground dry weight increased by 18.09%and 16.47%,root dry weight increased by 19.67%and 18.28%,leaf peroxidase(POD)activity increased by 34.44%and 42.94%,superoxide dismutase(SOD)activity increased by 37.24%and 56.79%,malondialdehyde(MDA)content decreased by 18.60%and 27.67%,and chlorophyll content increased significantly by 28.31%and 34.24%,respectively.At the 4-leaf stage of rice,urease,phosphatase and cellulase activities in the seedbed soil increased by 42.13%,25.96%and 33.59%,respectively,while soil alkaline nitrogen,available phosphorus and available potassium content decreased by 19.76%,19.02%and 17.88%,respectively.The application of biostimulants played a crucial role in promoting the growth of rice seedlings and enhancing soil nutrient absorption.

Effects of Nitrate on the Growth of Lateral Root and Nitrogen Absorption in Rice

Lateral root is primary organ for plant to explore and utilize soil nutrient efficiently. The development of lateral roots (LR) is controlled by both genetic factors and nutrient status in environment. To investigate the effects of nitrate (NO3-) on rice lateral root growth and nitrogen (N) uptake efficiency under upland condition, three treatments, including root-split culture and whole plant culture in N sufficient and deficient conditions, were used in a vermiculite culture experiment. Root-split treatment showed that the growth of lateral roots was stimulated by localized nitrate supply. However, in whole plant culture, elongation of lateral roots was induced by NO3- deficiency. The effects of NO3- on rice lateral root growth were genotype-dependent. Similar N concentration, soluble sugar concentration and N content in shoot were observed in both root-split treatment and whole plant culture under NO3- sufficient condition, suggesting that the nitrogen requirement for rice normal growth could be satisfied with only half of roots supplied with NO3-. In the root-split treatment, N uptake was positively correlated with the average of lateral root length (ALRL) in NO3--supplied side, suggesting that the ALRL is important for rice root N uptake in the environment where the nitrogen nutrient is limiting factor. No significant correlation was observed between N uptake and ALRL in whole plant culture under N sufficient condition, which implies that the length of lateral roots may not be the main factor to determine tire rice root N uptake in nutrient-rich zone. Morphological and metabolic evidence in this study provided some prospects for genetic improvement of root system characters to improve the efficiency of nutrient absorption in rice.

Genetic Analysis of Root Growth in Rice Seedlings Under Different Water Supply Conditions

To understand the genetic background of root growth of rice ( Oryza sativa L.) seedlings under different water supply conditions, quantitative trait loci (QTLs) and epistatic effect on seminal root length, maximum adventitious root length, adventitious root number, total root dry weight and ratio of root to shoot were detected using molecular map including 103 restriction fragment length polymorphism (RFLP) markers and 104 amplified fragment length polymorphism (AFLP) markers mapped on a recombinant inbred line (RIL) population with 150 lines derived from a cross between an lowland rice IR1552 and an upland rice Azucena in both solution culture (lowland condition) and paper culture (upland condition). Six QTLs and twenty-two pairs of epistatic loci for the four parameters were detected. Three QTLs detected for maximum adventitious root length in solution culture (MARLS), total root dry weight in both solution culture and paper culture (TRDWS and TRDWP) accounted for about 20%, 23% and 13% of the total variations, respectively. Only epistatic loci were found for maximum adventitious root length and adventitious root number in paper culture (MARLP and ARNP), and for ratio of root to shoot in both paper and solution culture (R/SP and R/SS), which accounted for about 12%-61% of the total variations in the parameters, respectively. No identical QTL or epistatic loci were found for the parameters in both solution and paper culture. The results indicate that there is a different genetic system responsible to root growth of rice seedlings under lowland and upland conditions and epistasis might be the major genetic basis for MARLP, ARNP, R/SP and R/SS.

Effects of Tiller-inhibitor on Growth and Yield Formation of Super Early Hybrid Rice Jinyou458

[Objective]The paper was to study the effect of tiller-inhibitor on the growth and yield formation of super early rice Jinyou 458.[Method] Two treatments including spraying tiller-inhibitor（TI） and spraying water（CK） at the SN-n stage were set in the test,the effect of tiller-inhibitor on yield and its components,leaf and plant morphology,field microclimate at booting stage and quality characteristics of rice population were studied.[Result] Spraying tiller-inhibitor could effectively reduce the occurrence of invalid and inefficient tillers,increase the proportion of high effective tillers（tiller with 4 or more leaves） in tiller composition at the maximal tiller stage.The panicle length,spikelets per panicle,spikelets density,number of secondary branches and the secondary spikelets,seed setting rate of rice plant sprayed with tiller-inhibitor were significantly higher than CK.Meanwhile,spraying tiller-inhibitor could increase plant height,biomass weight and leaf area index of rice population during middle and late stages of rice growing,improve the leaf temperature of top three leaves and the light transmittance of rice population at the booting stage,increase the leaf SPAD value,thus enhance photosynthetic capacity of rice plants.It also showed the characteristics of elongating the internode of rice plant and decreasing the stem thickness,etc.[Conclusion] The panicle-bearing rate of stems and tillers,effective panicles,spikelets per panicle,seed setting rate and 1 000-grain weight had coordinately increased after spraying tiller-inhibitor,thus increased the yield.

Effect of Fulvic Acid on Growth and Yield Components of Direct Seeding Rice

ObjectiveThis study aimed to investigate the effect of fulvic acid on the growth and yield components of direct seeding rice （Nanjing 44）. MethodThe rice seeds were soaked in 0 （water as a control）, 1, 2, 4 and 6 g/L fulvic acid （FA） before sowed. Then, the rice morphological indices, leaf chlorophyll content, photosynthesis parameters, root activity and chlorophyll fluorescence parameters were measured in the following field studies. ResultCompared with the control, the leaf area index, chlorophyll content, net photosynthetic rate, stomatal conductance and dry matter weight and some fluorescence parameters such as the maximum photochemical efficiency of photosystem II （PSII） （Fv/Fm）, excitation energy capture efficiency of opened PSII reaction center （Fv’/Fm’） and efficiency of the open reaction centre （ΦPS II） increased by different levels at both jointing stage and heading stage of direct seeding rice, whose seeds were soaked by FA with different concentrations. High FA concentration （4-6 g/L） significantly increased the cultivated rice leaf area index, chlorophyll content, net photosynthetic rate, stomatal conductance, transpiration rate and dry matter weight by 10.32% -22.88% , 5.88% -13.11% , 12.16% -26.84% , 11.43% -88.46% , 10.63% -21.63% , 18.49% -19.68% , respectively, thereby improving the physiological function and light energy transform efficiency of rice at the growth stage. With FA concentration increasing, the yield, effective panicles, grain number per panicle and seed setting rate were increased significantly compared with the control by 17.52%-18.71%, 3.46%-3.85%, 6.30%- 6.51% and 7.82%-8.69% respectively. ConclusionSoaking rice seed with FA could be considered as an effective way to improve the rice competitiveness at early growth stage.

Effect of Microbial Inoculum Fertilizer on the Growth and Yield of Super Hybrid Rice

The research designed four application quantities of 0, 2 250, 4 500 and 6 750 g/hm2 based on Liangyou No. 959 to explore the effects of microbial inocu- lure fertilizer on growth and yield of super hybrid rice. The results indicate that the treatment with traditional fertilizers and 4 500 g/hm2 HYT microbial inoculum fertilizer performed the best, where average number of tiller was 2.4 more than that of the control; the number of effective ear was 11.05% higher; yield increased by 10.3%. These have demonstrated that microbial inoculum fertilizer is of great value in pro- motion on super hybrid rice production.

Study on Cadmium Tolerance of Seed Germination and Seedlings Growth of Different Rice Varieties

The research used bioassay method to explore seed tolerance of Cd in terms of seed germination and seedling growth. Specifically, 12 rice varieties of three types were investigated under Cd stress, covering germination rate, shooting index, vigor index, seedling and shoot lengths, and fresh weights. The results showed that as Cd concentration grew, seed germination and seedling growth kept increasingly inhibited; germination index, vigor index, root length, shoot length and fresh weights went down; inhibition effects on seed germination and seedling growth were conventional rice〉two-line hybrid rice〉three-line hybrid ,rice. Shanyou 9588, Tianyou 998, Chuanxiang 8, and Y Liangyou 1 performed ~rongly in Cd tolerance; C Liangyou 651, Nei 5 You 263, Xiangwanxian 16, Huanghuazhan, Xiangwanxian 13, and Zhunliangyou 527 performed poorly in Cd tolerance, and Cd tolerance of rest treatments were moderate.

Effects of Farming and Seedling-raising Methods on Population Growth and Grain Yield of Mechanized Transplanting Rice

The effects of farming method, rice variety and seedling-raising method were studied on the population growth quality and grain yield of the mechanized transplanting rice by way of three-factor split plot design. The results showed that the no-tillage mechanical transplanting treatment was poorer than the conventional mechanical transplanting treatment in transplanting quality in general, but the former was similar to the latter in population growth quality. In regard to grain yield, the no-tillage mechanical transplanting treatment was lower than the conventional me- chanical transplanting treatment. Raising both pot-mat seedling and plastic-tray seedling did not make much difference in population growth and grain yield of mechanized transplanting rice, so both of the seedling-raising methods can be adopted according to practical conditions.

A Study on the Effects of Oxygenation Irrigation on Some Growth Agronomic Traits of Super Rice Shenyou 9516

In the growing process of rice, roots need aerobic respiration. Oxygenation irrigation means oxygenation in accordance with the demand of crops for oxygen for their growth. This experiment designed three treatments： mechanical oxygenation, chemical oxygenation and conventional irrigation. The mechanical oxygenation group A was divided into 6 small treatment groups and the chemical oxygenation group B was divided into 3 small treatment groups. Each treatment group had 3 replications and the average was used for analysis. Some agronomic traits of the roots and the plants of super rice were examined. The result showed that the two oxygenation treatments significantly promoted the growth of the roots and the plants. In the me- chanical oxygenation group A4, the number of filled grain per panicle was 37.6% higher than that of the conventional treatment group, and the kilo-grain weight was 7.4% higher than that of the conventional treatment group. The study results provide a theoretical basis for the application of oxygenation irrigation to super rice.

On the Growth and Physiological Characteristics of Rice under Smashing Ridge Tillage

Two-line super hybrid rice （Oryza sativa L.） Guiliangyou 2 was taken as the experimental variety, the growth and physiological characteristics of rice under conventional tillage and smashing ridge tillage were compared based on field re- search. The results showed that smashing ridge tillage was beneficial to the tillering growth of rice plants in the the middle and later periods of tillering; under the tillage mode, the white root was more, the vigour was strong during the whole growing period, the SPAD was extremely significantly higher than that of conventional tillage, the net photosynthetic rate of the leaves was high and held green long, which were beneficial to the production and accumulation of photoassimilates; during mature pe- riod, the dry matter accumulation of the overground part under smashing ridge tillage was significantly higher than that of conventional tillage, and the number of productive ears under smashing ridge tillage was more than that of conventional tillage by 27.6×10^4/hm2, thus, the yield-increasing effect was significant and in- creased by 20.36%.

Effects of elevated ozone on growth and yield of field-grown rice in Yangtze River Delta,China

With rapid industrialization and urbanization in the Yangtze Delta, China, the tropospheric ozone concentration has increased to levels that induce crop yield loss. Rice, a widely grown crop in China, was investigated in field-established, open-top chambers. Four treatments were used： charcoal-filtered air （CF）, non-charcoal-filtered air （NF）, and charcoal-filtered air with two levels of additional ozone （O3-1 and O3-2）. The AOT40s （accumulated hourly mean ozone concentration above 40 ppbv） were 0, 0.91, 23.24, and 39.28 ppmv.h for treatment of CE NF, O3-1, and O3-2, respectively. The rice height and biomass were reduced in the elevated ozone concentration. Less organic matter partitioning to roots under the elevated ozone significantly decreased rice root activity. The yield loss was 14.3% and 20.2% under O3-1 and O3-2 exposure, respectively. This was largely caused by a reduction in grain weight per panicle.

Effects of Integrated Organic and Inorganic Fertilizers on Yield and Growth Parameters of Rice Varieties

We investigated the effects of integrated organic and inorganic fertilizers on the growth and yield of indica rice variety Manawthukha and japonica rice variety Genkitsukushi.In a split-plot design,the two rice varieties were assigned as main plot factors,and the integrated treatments were the subplot factors,including no-N fertilizer(N0),50%chemical fertilizer(CF)(CF50),100%CF(CF100),50%CF+50%poultry manure(PM)(CF50PM50),50%CF+50%cow manure(CM)(CF50CM50),and 50%CF+50%compost(CP)(CF50CP50).CF100 was equivalent to N at 85 kg/hm2.Manure was applied based on the estimated mineralizable nitrogen(EMN)level,which is dependent on total N(%)of each manure type.Manawthukha rice plants were taller with higher tiller number and dry matter content.However,higher soil-plant analysis development(SPAD)values were measured in Genkitsukushi throughout the crop growth period,resulting in higher seed-setting rate(%)and greater yield.At the same N level,CF50PM50 application in both rice varieties resulted in higher SPAD values,plant height and tiller number than CF100.CF50PM50 containing total N more than 4%supplied synchronized N for the demands of the rice plants,resulting in maximum dry matter,yield and yield components.CF50CM50 and CF50CP50 treatments containing total N less than 4%resulted in lower yields which were similar to CF100.These results indicated that integrating organic and inorganic fertilizers enhanced growth parameters and yields of Manawthukha and Genkitsukushi,while reducing the dose of chemical fertilizer.

Comparisons of Yield and Growth Behaviors of Hybrid Rice Under Different Nitrogen Management Methods in Tropical and Subtropical Environments

To compare the grain yield and growth behaviors of hybrid rice, field experiments were conducted in a subtropical environment in Changsha, Hunan Province, China, and in two tropical environments in Gazipur and Habiganj in Bangladesh during 2009 to 2011. Three hybrid rice cultivars were grown under three nitrogen （N） management treatments in each experiment. The results showed that grain yield was significantly affected by locations, N treatments and their interaction but not by cultivars. Changsha produced 8-58% higher grain yields than Bangladesh locations. Sink size （spikelet number per unit land area） was responsible for these yield differences. Larger panicle size （spikelet number per panicle） contributed to greater sink size in Changsha. Aboveground total biomass was greater in Changsha than in Bangladesh locations, whereas harvest index was higher in Bangladesh locations than in Changsha. Crop growth rate （CGR） was greater at Changsha than Bangladesh locations during vegetative phase, while the difference was relatively small and not consistent during the later growth phases. Higher leaf area index and leaf area duration were partly responsible for the greater CGR in Changsha. Real-time N management （RTNM） produced lower grain yields than fixed-time N management in more than half of the experiments. Our study suggested that further improvement in rice yield in the tropical environments similar to those of Bangladesh will depend mainly on the ability to increase panicle size as well as CGR during vegetative phase, and the chlorophyll meter threshold value used in RTNM needs to be modified according to environmental conditions and cultivar characteristics to achieve a desirable grain yield.

Rice Yield Estimation by Integrating Remote Sensing with Rice Growth Simulation Model

Since remote sensing can provide information on the actual status of an agricultural crop, the integration between remote sensing data and crop growth simulation models has become an important trend for yield estimation and prediction.The main objective of this research was to combine a rice growth simulation model with remote sensing data to estimate rice grain yield for different growing seasons leading to an assessment of rice yield at regional levels. Integration between NOAA (National Oceanic and Atmospheric Administration) AVHRR (Advanced Very High Resolution Radiometer) data and the rice growth simulation model ORYZA1 to develop a new software, which was named as Rice-SRS Model, resulted in accurate estimates for rice yield in Shaoxing, China, with an estimation error reduced to 1.03% and 0.79% over-estimation and 0.79% under-estimation for early, single and late season rice, respectively. Selecting suitable dates for remote sensing images was an important factor which could influence estimation accuracy. Thus, given the different growing periods for each rice season, four images were needed for early and late rice, while five images were preferable for single season rice.Estimating rice yield using two or three images was possible, however, if images were obtained during the panicle initiation and heading stages.

Nitrate Effect on Rice Growth and Nitrogen Absorption and Assimilation at Different Growth Stages

The effect of nitrate （NO3^-） on rice （Oryza sativa L.） growth as well as N absorption and assimilation during different growth stages was examined using three typical rice cultivars. Dry weight, yield, N uptake, nitrate reductase activity （NRA） in leaves, and glutamine synthetase activity （GSA） in roots and leaves during their entire growth periods, as well as the kinetic parameters of ammonium （NH4^＋） uptake at the seedling stage, were measured with solution culture experiments. Results indicated that addition of NH4^＋-N and NO3^-N at a ratio of 75：25 （NH4^＋＋NO3^- treatment） when compared with that of NH4^＋-N alone （NH4^＋ treatment） increased the dry weight of ‘Nanguang＇ cultivar by 30% and ‘Yunjing 38＇ cultivar by 31%, and also increased their grain yield by 21% and 17%, respectively. For the four growth stages, the total N accumulation in plants increased by an average of 36% for ‘Nanguang＇ and 31% for ‘Yunjing 38＇, whereas the increasing effect of NO3^- in the ‘4007＇ cultivar was only found at the seedling stage, in the NH4^＋＋NO3^- treatment compared to the NH4^＋ treatment, NRA in the leaves increased by 2.09 folds, and GSA increased by 92% in the roots and 52% in the leaves of the three cultivars. NO3^- supply increased the maximum uptake rate （Vmax） in the ‘Nanguang＇ and ‘Yunjing 38＇ cultivars, reflecting that the NO3^- itself, not the increasing N concentration, increased the uptake rate of NH4^＋ by rice. There was no effect on the apparent Michaelis-Menten constant （Kin） of the three cultivars. Thus, some replacement of NH4^＋ with NO3^-could greatly improve the growth of rice plants, mainly on account of the increased uptake of NH4^＋ promoted by NO3^-, and future studies should focus on the molecular mechanism of the increased uptake of NH4^＋ by NO3^-.

Effects of Temperature,Humidity and Different Rice Growth Stages on Vertical Migration of Aphelenchoides besseyi

The vertical migration of Aphelenchoides besseyi under different temperatures and humidities and at different rice growth stages was investigated. It was found that the optimum temperature for the development and reproduction of A. besseyiwas 25-30℃. At the same temperature, the rate of vertical migration increased with rising relative humidity. Artificial inoculation tests showed that at the elongation stage, nematodes survived mainly on the upper and middle parts of rice culms and the number of nematodes decreased by 50% at 20 days after inoculation compared with that at 5 days after inoculation. Whereas at the booting stage, nematodes accumulated in young panicles and reproduced quickly,, and the average number of nematodes at 20 days after inoculation increased to 164.5, three times of that at 5 days after inoculation.

Characteristics of Growth and Yield Formation of Rice in Rice-Fish Farming System

By using single rice cultivation as a control, the effect of rice-fish culture on growth dynamic, plant type and yield formation of rice was studied. The results showed as follows： rice-fish culture improved the physical-chemical properties of arable layer soil of paddy field, extended growth period of rice, increased dry matter and LAI of different growth stages, improved three top leaves area, deterred the degeneration of leaves function, increased the diameter of stem, promoted the growth of roots and the formation of roots in the extended stem. At the same time, rice-fish culture extended the length of basal internodes, increased the number of internodes, uplifted the gravity of plant, and depressed the root vigor. For the grain yield and yield structure office, rice-fish culture decreased ear/tillering ratio, spikelet/panicle and seed set percentage, increased grain weight. If variety choice and cultivation technology were controlled appropriately, rice-fish culture could increase the effective panicles and improve grain yield of rice.

Advanced Backcross QTL Analysis for the Whole Plant Growth Duration Salt Tolerance in Rice(Oryza sativa L.)

Salinity is a major factor limiting rice yield in coastal areas of Asia. To facilitate breeding salt tolerant rice varieties, the wholeplant growth duration salt tolerance（ST） was genetically dissected by phenotyping two sets of BC2F5 introgression lines（ILs） for four yield traits under severe natural salt stress and non-stress filed conditions using SSR markers and the methods of advanced backcross QTL（AB-QTL） analysis and selective introgression. Many QTLs affecting four yield traits under salt stress and nonstress conditions were identified, most（〉90%） of which were clustered in 13 genomic regions of the rice genome and involved in complex epistasis. Most QTLs affecting yield traits were differentially expressed under salt stress and non-stress conditions. Our results suggested that genetics complementarily provides an adequate explanation for the hidden genetic diversity for ST observed in both IL populations. Some promising Huanghuazhan（HHZ） ILs with favorable donor alleles at multiple QTLs and significantly improved yield traits under salt stress and non-stress conditions were identified, providing excellent materials and relevant genetic information for improving rice ST by marker-assisted selection（MAS） or genome selection.

Growth Characteristics and Yield of Late-Season Rice under No-tillage and Non-flooded Cultivation with Straw Mulching

A long-term field experiment （started at 2003） was conducted to determine the effects of different dce cultivation methods on growth characteristics and grain yield of late-season rice under double-rice cropping system in seasonal drought region of southeast China （Yujiang County, Jiangxi Province）. The rice cultivation methods included no-tillage and flooded rice cultivation （N-F）, no-tillage and non-flooded rice cultivation with straw mulching （N-SM）, and no-tillage and non-flooded rice cultivation without straw mulching （N-ZM）. There was no significant difference in rice grain yield between the N-SM and N-F treatments. However, the rice grain yields in the N-SM and N-F treatments were significantly higher than that in the N-ZM treatment. The late-season rice plants in the N-SM treatment had significantly higher numbers of effective panicles and total grains per hill compared with those in the N-ZM treatment. The above-ground dry matter of late-season rice was similar between the N-SM and N-F treatments. Compared with the N-F treatment, the N-ZM and N-SM treatments significantly decreased the leaf area at the heading stage. Moreover, the N-SM treatment could significantly increase total root length and root tip number at the grain-filling stage compared with the N-ZM treatment.