Integrative biogeography: Validating hypotheses of species distribution

DEAR EDITOR,Biogeography is a scientific field dedicated to the investigation of the origins and distribution patterns of organisms,as well as predicting future alterations in their geographical distributions(Cox&Moore,2005).However,the majority of conclusions drawn within the field of biogeography are hypothetical.Rigorous testing of these biogeographic hypotheses remains a considerable challenge.This paper presents the concept of“integrative biogeography”,which emphasizes the experimental testing of biogeographic hypotheses through studies on geological history,as well as biotic and abiotic factors(Figure 1).

Detecting the distribution of and public attitudes to charismatic alien species based on media coverage

Charismatic species are often reported by the media,providing information for detecting population status and public perception.To identify the number and distribution of free-living Black Swan(Cygnus atratus),a charismatic alien species in Chinese mainland and to detect the public and the media attitudes to the species,we analyzed the reports and emotional tendency from media coverage in 2000-2022 using manual reading,crawler extraction and latent Dirichlet allocation.A total of 6654 Black Swans were reported at 711 sites,including 147 individuals at 30 nature reserves.Successful breeding was reported at one-fourth of the total sites,including five nature reserves.The proportion of positive emotional tendency to Black Swans was overwhelming in the reports and was higher than that to alien species in general,suggesting that the public and the media are unaware of the risk of biological invasion.Effective management of invasive species requires the media clarifies the invasion risk of charismatic alien species.Promoting the unity between the harmfulness of abstract concept of alien species and the charisma of a specific alien species among the public help effective management.

Distribution and dynamics of niche and interspecific association of dominant phytoplankton species in the Feiyun River basin,Zhejiang,China

To investigate the dominant species and interspecific association in the phytoplankton community of the Feiyun River basin in Zhejiang Province,East China,the main stream and the Shanxi Zhaoshandu Reservoir in the downstream were chosen as the study area,for which 22 sampling sites were designated.Sampling was conducted in September 2021,January,May,and July 2022.Phytoplankton species were identified from both quantitative samples and in-vivo observations.Phytoplankton was quantified by direct counting.Results show that there were 98 species belonging to 6 phyla and 78 genera.In addition,to clarify the niches of the dominant phytoplankton species and their interspecific association,the dominance index was calculated,and a comprehensive analysis was conducted including niche width,niche overlap value,ecological response rate,overall association,chi-square test,and the stability.The phytoplankton community exhibited characteristics of a Cyanobacteria-Chlorophyta-Diatom type community,showing higher diversity in spring and lower diversity in summer.Among 11 dominants phytoplankton species from 3 phyla,both frequency and dominance degree varied seasonally,of which Microcystis sp.was the dominant species in Spring,Autumn,and Winter.The niche widths of the dominant species ranged from 0.234 to 0.933,and were categorized into three groups.The niche overlap values of the 11 dominant species ranged from 0.359 to 0.959,exhibiting significant seasonal differences-highest in winter followed by autumn,spring,and summer in turn.The overall correlation among dominant species in all four seasons revealed a non-significant negative association,resulting in an unstable community structure.A significant portion(84.2%)of species pairs displayed positive associations,suggesting a successional pattern where Diatoms dominated while other dominant species shared resources and space.Despite this pattern,stability measurements indicated that the dominant species community remained unstable.Therefore,careful monitoring is recommended for potential water environment issues arising from abnormal proliferation of dominant species in the watershed during winter.This research built a theoretical foundation with a data support to the early warning of eutrophication and provided a reference for water resources management in similar watersheds along the eastern coast of China.

Optimal Control for Age Distribution and Weighted Size Competitive Species in a Polluted Environment

In the paper,we study an optimal control for a system representing a competitive species model with fertility and mortality depending on a weighted size in a polluted environment.A fixed point theorem is applied to obtain the existence and uniqueness exhibited by a non-negative solution of above mentioned model.A maximum principle helps to carefully verify the existence of the optimal control policy,and tangent-normal cone techniques help to obtain the optimal condition specific to control issue.

Species composition and distribution of common Crassostrea and Saccostrea oysters along the coast of Hainan Island

Oyster cultivation is a pivotal economic industry in Hainan Island,South China,where a high oyster species diversity is shown.However,the specific distribution and biodiversity of oyster resources in the island have remained unclear.To elucidate the diversity of oyster species and their distribution there,307 oyster samples were collected from 29 sites in the intertidal zone around the island,and were identified using both morphological and molecular approaches.A minimum of 12 oyster species were identified in taxonomy,including Crassostrea species(C.gigas angulata,C.sikamea,C.iredalei,C.dianbaiensis,C.talonata,C.ariakensis,and C.hongkongensis),and Saccostrea species(S.malabonensis,S.mordax,S.echinata,S.circumsuta,and S.mordoides).The results revealed a remarkable diversity of oyster species along the coast of the island.Particularly noteworthy are that S.malabonensis and S.mordax constituted 36%and 22%of the collected specimens,respectively.This study provided a comprehensive overview on current state of oyster biodiversity in Hainan,serving as a valuable reference for conservation and research on species distribution and resource dynamics in oyster populations.

How elevation and soil properties affect plant distribution patterns and species diversity in the Mediterranean mountain ecosystem of Al-Jabal Al- Akhdar, Libya

The objectives of this study were to assess distribution patterns of plant species richness,plant diversity and vegetation structure in relation to environmental factors along elevation gradient in Al-Jabal Al-Akhdar,Libya.For each species,its growth form,chorological affinities,degree of occurrence,endemism status and originality were provided.A total of 534 taxa were generated from 70 families of the flowering plants,and 3 of the non-flowering plants were identified.The native flora of the study area was counted for 80.2%of the total indigenous taxa(465).The hump-shaped pattern of plant species richness was obtained,with the highest species richness at the mid-elevations,and both ends of the gradient have the lowest.The annuals(300 species,56.2%)and non-succulent perennial herbs(165 species,30.9%)were the most dominant growth forms of the total species composition.Along the elevation gradient,Asteraceae,Fabaceae,Poaceae,Lamiaceae and Apiaceae were the dominant families with the highest numbers of species.This investigation recorded 31 endemic taxa,comprising 25 dicots and 6 monocots,primarily of Mediterranean origin,with most belonging to the Asteraceae and Lamiaceae families.Mediterranean chorotype was the dominant,whether pure(mono-),or combined with one(bi-and pluri-regional)or more(pluri-regional).Application of cluster analysis on the vegetation data yielded four cluster groups;each was linked to an elevation level.It emphasized the importance of establishing conservation strategies to minimize human disturbance and safeguard relic habitats of Juniperus phoenicea L.at its southern distribution limits in Africa,underlining the proactive management required for species preservation.The application of Redundancy Analysis revealed that Shannon diversity index(H'),pH and Fe were the determinant soil factor in the mid-elevation levels(L2 and L3)whereas altitude,fine sand,HCO3,OM,and soil contents of Na,SO4 and Cl for the extreme levels(L1 and L4).

Environmental factors influencing the distribution of endangered endemic species Hedysarum criniferum Boiss in arid and semi-arid rangelands,Iran

Understanding the factors influencing the distribution of plant species is crucial for enhancing the management of endangered ecosystems. This study investigated the response of Hedysarum criniferum Boiss, an endemic and endangered species to 25 environmental variables within its habitats with an area of 2.95×10^(5) km^(2) in arid and semi-arid rangelands of Iran. The purpose of this research is to identify the key environmental factors affecting the distribution and habitat preferences of H. criniferum for further conservation and restoration of the species. To predict the occurrence of H. criniferum and explore its relationship with environmental factors, we employed the best subset regression analysis, the hierarchical classification, and the extended Huisman-Olf-Fresco(eHOF) model. The results showed that four environmental variables, i.e., gravel content, pH, annual minimum temperature, and mean annual temperature showed significant correlations with the canopy cover of H. criniferum(P<0.05). The probability of H. criniferum occurrence increased with higher precipitation and elevation, while it decreased with higher mean annual temperature, annual minimum temperature, and gravel content. The species' response curves and their optimal values, as assessed by the eHOF model, indicated that the response to mean annual temperature, ranging from 12℃ to 16℃, was optimal at 13℃. The response to mean annual precipitation, within a range of 150–650 mm, was optimal at 650 mm. Elevation responses, spanning from 1546 to 2450 m, showed an optimum at 2450 m. Regarding soil characteristics, the response to gravel content, ranging from 13.0%–48.0%, demonstrated an optimal value at 20.0%. The pH levels, varying from 7.5 to 8.2, prompted a sine-shaped response with an optimal pH of 8.0. These findings provide valuable insights for predicting species occurrence and identifying suitable locations for restoration programs. Our study underscores the importance of considering multiple environmental variables in habitat suitability assessments. By incorporating these broader considerations, we can further refine predictive models and enhance conservation efforts aimed at restoring habitats conducive to the luxuriance of endangered species like H. criniferum.

Distributional patterns of species diversity of main plant communities along altitudinal gradient in secondary forest region,Guandi Mountain,China

Fourteen plots were chosen along with the altitude of 1600-2600 m in Guandi Mountain, Shanxi Province, China to investigate all the trees in the plots, and the species diversity indexes were calculated for analyzing the effects of altitudinal gradient on plant species diversity. The results showed that the order of dominant species from low altitude to high altitude is as Quercus liaotungensis Koidz, Pinus tabulaeformis, Betula platyphylla, B. albo-sinensis, Picea wilsonii, P. Meyeri and Larix principis-rupprechtii. With altitude increasing, the average height and DBH of the arbor firstly increase and then decrease, the maximal height and DBH of the arbor present the unimodal variable trend, the maximal height of coniferous and broad-leaved trees firstly increases and then decreases, the maximal DBH of broad-leaf trees has no clear fluctuation, and the maximal DBH of the needle-leaf trees decreases gradually. Moreover, in middle altitudinal communities （the altitude of 1900-2200 m）, the maximal height and DBH of the needle-leaf trees are larger than these of broad-leaf trees. Both Shannon-wiener index and Margalef index of the communities present the unimodal variable trend, with a peak in the mid-altitude. Plant species diversity in the mid-altitude （1900-2200 m） is higher than that of the low altitude （1600-1900 m） and the high altitude （2200-2600 m）. In addition, the unimodal variable trend of α species diversity is clearly correlated with the altitudinal gradient. The change of plant species diversity is significantly correlated with the altitudinal gradient, and also related to the community structure, the community composition, the feature of species and the human disturbance.

Distribution Patterns of Ground Moss Species and Its Relationships with Environmental Factors in Changbai Mountain, Northeast China

The relationships of 42 species of ground moss with six environmental factors in 41 sites on Changbai Mountain Biosphere Reserve were analyzed. Four site groups and four groups of ground moss ecological species were identified using the method of Two-way Indicator Species Analysis (TWINSPAN). The results of Detrended Canonical. Correspondence Analysis (DCCA) showed that altitude, soil sand content, soil acidity, forest canopy coverage and soil water content are the five major environmental factors influencing the distributional patterns of the moss species. The four groups of ecological species, which correspond well with the four site groups, are projected on the species-environment biplot of DCCA. Group 1 dominated in the bogs of Larix olgensis forest, group 2 in the alpine tundra, group 3 in the dense conifer forest, and group 4 mainly in the Betula ermanii community and the Betula ermanii-Larix olgensis forest in sub-alpine respectively.

Climatic Factors for Limiting Northward Distribution of Eight Temperate Tree Species in Eastern North America

Eight temperate deciduous tree species, Acer rubrum L., A. saccharinum L., A. saccharum Marsh., Belluta alleghaniensis Britton., Fraxinus nigra Marsh., Quercus rubra L., Titia americana L., and Ulmus americana L. in eastern North America, were selected to explore relationship between the northward distribution of temperate tree species and climatic factors. For each species, more than 30 sites at their north limits of distribution were obtained from their distribution maps, and 11 climatic indices at the north limits were computed. The standardized standard deviation (SD) method, which compares the magnitude of variance of climatic indices, was used to detect which climatic parameter was the most important for explaining northward distribution of these species. We presume that the climatic parameter that has the smallest variance at the north limit would be assigned as the dominant climatic factor for limiting the distribution of this species. The results derived from the standardized SD method indicated that the SD value of warmth index (WI) and/or annual biotemperature (ABT) were the smallest among the 11 climatic indices. Since both WI and ABT represent growing season temperature, it suggested that growing season temperature was the most important climatic factor for explaining the northward distribution of these temperate tree species. The relationships between several climatic indices, WI, coldness index (CI), annual precipitation (AP), annual range of temperature (ART) and humid/arid index were also analyzed. As a result, at the north limits of all these species, both WI and CI decreased with an increase of AP, and CI increased with an increase of ART. Besides growing season temperature, precipitation and climatic continentality also have influence on the northward distribution of the temperate trees in eastern North America.

Efficient and Stable Perovskite Solar Cells and Modules Enabled by Tailoring Additive Distribution According to the Film Growth Dynamics

Gas quenching and vacuum quenching process are widely applied to accelerate solvent volatilization to induce nucleation of perovskites in blade-coating method.In this work,we found these two pre-crystallization processes lead to different order of crystallization dynamics within the perovskite thin film,resulting in the differences of additive distribution.We then tailor-designed an additive molecule named 1,3-bis(4-methoxyphenyl)thiourea to obtain films with fewer defects and holes at the buried interface,and prepared perovskite solar cells with a certified efficiency of 23.75%.Furthermore,this work also demonstrates an efficiency of 20.18%for the large-area perovskite solar module(PSM)with an aperture area of 60.84 cm^(2).The PSM possesses remarkable continuous operation stability for maximum power point tracking of T_(90)>1000 h in ambient air.

Differential distribution of PINK1 and Parkin in the primate brain implies distinct roles

The vast majority of in vitro studies have demonstrated that PINK1 phosphorylates Parkin to work together in mitophagy to protect against neuronal degeneration.However,it remains largely unclear how PINK1 and Parkin are expressed in mammalian brains.This has been difficult to address because of the intrinsically low levels of PINK1 and undetectable levels of phosphorylated Parkin in small animals.Understanding this issue is critical for elucidating the in vivo roles of PINK1 and Parkin.Recently,we showed that the PINK1 kinase is selectively expressed as a truncated form(PINK1–55)in the primate brain.In the present study,we used multiple antibodies,including our recently developed monoclonal anti-PINK1,to validate the selective expression of PINK1 in the primate brain.We found that PINK1 was stably expressed in the monkey brain at postnatal and adulthood stages,which is consistent with the findings that depleting PINK1 can cause neuronal loss in developing and adult monkey brains.PINK1 was enriched in the membrane-bound fractionations,whereas Parkin was soluble with a distinguishable distribution.Immunofluorescent double staining experiments showed that PINK1 and Parkin did not colocalize under physiological conditions in cultured monkey astrocytes,though they did colocalize on mitochondria when the cells were exposed to mitochondrial stress.These findings suggest that PINK1 and Parkin may have distinct roles beyond their well-known function in mitophagy during mitochondrial damage.

Pretreatment red blood cell distribution width as a predictive marker for postoperative complications after laparoscopic pancreatoduodenectomy

BACKGROUND Red blood cell distribution width(RDW)is associated with the development and progression of various diseases.AIM To explore the association between pretreatment RDW and short-term outcomes after laparoscopic pancreatoduodenectomy(LPD).METHODS A total of 804 consecutive patients who underwent LPD at our hospital between March 2017 and November 2021 were retrospectively analyzed.Correlations between pretreatment RDW and clinicopathological characteristics and short-term outcomes were investigated.RESULTS Patients with higher pretreatment RDW were older,had higher Eastern Cooperative Oncology Group scores and were associated with poorer short-term outcomes than those with normal RDW.High pretreatment RDW was an independent risk factor for postoperative complications(POCs)(hazard ratio=2.973,95%confidence interval:2.032-4.350,P<0.001)and severe POCs of grade IIIa or higher(hazard ratio=3.138,95%confidence interval:2.042-4.824,P<0.001)based on the Clavien-Dino classification system.Subgroup analysis showed that high pretreatment RDW was an independent risk factor for Clavien-Dino classi-fication grade IIIb or higher POCs,a comprehensive complication index score≥26.2,severe postoperative pancreatic fistula,severe bile leakage and severe hemorrhage.High pretreatment RDW was positively associated with the neutrophil-to-lymphocyte ratio and platelet-to-lymphocyte ratio and was negatively associated with albumin and the prognostic nutritional index.CONCLUSION Pretreatment RDW was a special parameter for patients who underwent LPD.It was associated with malnutrition,severe inflammatory status and poorer short-term outcomes.RDW could be a surrogate marker for nutritional and inflammatory status in identifying patients who were at high risk of developing POCs after LPD.

Modelling the spatial distribution of snake species in northwestern Tunisia using maximum entropy(Maxent) and Geographic Information System(GIS)

We used GIS and maximum entropy to predict the potential distribution of six snake species belong to three families in Kroumiria（Northwestern Tunisia）： Natricidae（Natrix maura and Natrix astreptophora）, Colubridae（Hemorrhois hippocrepis, Coronella girondica and Macroprotodon mauritanicus）, and Lamprophiidae（Malpolon insignitus）. The suitable habitat for each species was modelled using the maximum entropy algorithm, combining presence field data（collected during 16 years：2000–2015） with a set of seven environmental variables（mean annual precipitation, elevation, slope gradient,aspect, distance to watercourses, land surface temperature and normalized Differential Vegetation Index. The relative importance of these environmental variables was evaluated by jackknife tests and the predictive power of our models was assessed using the area under the receiver operating characteristic. The main explicative variables of the species distribution were distance from streams and elevation, with contributions ranging from 60 to 77 and from 10 to 25%,respectively. Our study provided the first habitat suitability models for snakes in Kroumiria and this information can be used by conservation biologists and land managers concerned with preserving snakes in Kroumiria.

Environmental Correlates of Distribution of the 25 Broad-leaved Tree Species Indigenous to Guangdong Province,China

Twenty-five tree species indigenous to Guangdong Province were chosen in this study to portray their distribution patterns in relation to environmental factors. Both data of species distribution and environmental factors were tabulated based on a digitized map of Guangdong Province gridded at 0.5° latitude × 0.5° longitude. Grid-based diversity was mapped using DMAP, a distribution mapping program, and horizontal patterns were assessed using Kruskal-Wallis tests. The diversity center of the indige- nous tree species under study is located north of 23° N. These tree species exhibit significant latitudinal variation (P = 0.007 4), but no significant longitudinal difference (P = 0.052 2). Non-metric Multidimensional Scaling (NMS) identified five different ecological species groups, while Canonical Correspondence Analysis (CCA) showed the distribution of tree species along each of the five envi- ronmental gradients. An understanding of the environmental correlates of distribution patterns has great implication for the introduc- tion of the indigenous tree species for afforestation.

Species composition,distribution patterns and ecological functions of biological soil crusts in the Gurbantunggut Desert

As one of the most important biological factors that maintain the stability of the largest fixed and semi-fixed desert in China,the Gurbantunggut Desert,the biological soil crusts (BSCs) develop well and play critical ecological roles in the desert ecosystem. In this paper,we briefly summarize our research findings since 2002 including species composition,distribution pattern and ecological functions of BSCs in the desert. Our results indicate abundant species diversity of BSCs in the Gurbantunggut Desert in comparison to other deserts in China. At the scales of sand dune or whole desert,the distribution patterns of BSCs are location-specific. The existence of BSCs in this desert could:(1) accelerate the formation of desert soil and the weathering of minerals; (2) accumulate organic matter in surface soil through related species in soil crusts; (3) enhance the abilities of sand surface to resist wind erosion; (4) influence seed germination of vascular plants; and (5) enhance the production of dew deposition on sandy soil surface.

Species distribution of polymeric aluminium ferrum——timed complexation colorimetric analysis method of Al-Fe-Ferron

The effects of the calorimetric buffer solutions were investigated while the two colorimetric reactions of AI-ferron complex and Fe-ferron complex occurred individually, and the effects of the testing wavelength and the pH of the solutions were also investigated. A timed complexatian colorimetric analysis method of Al-Fe-ferron in view of the total concentration of {AI + Fe} was then established to determine the species distribution of polymeric Al-Fe. The testing wavelength was recommended at 362 net and the testing pH value was 5. With a comparison of the ratios of n(Al)/n(Fe), the standard adsorption curves of the polymeric Al-Fe solutions were derived from the experimental results. Furthermore, the solutions' composition were carious in both the molar n(Al)/n(Fe) ratios, i.e. 0/0, 5/5, 9/1 and 0/10, and the concentrations associated with the total ( Al + Fe which ranged from 10(-5) to 10(-4) mol/L..

Variation of Cd concentration in various rice cultivars and derivation of cadmium toxicity thresholds for paddy soil by species-sensitivity distribution

It is imperative to derive an appropriate cadmium (Cd) health risk toxicity threshold for paddy soils to ensure the Cd con-centration of rice grains meet the food safety standard. In this study, 20 rice cultivars from the main rice producing areas in China were selected, and a pot-experiment was conducted to investigate transformation of Cd in paddy soil-rice system with 0 (CK), 0.3 mg kg–1 (T1) and 0.6 mg kg–1 (T2) Cd treatments in greenhouse. The results showed that Cd concentrations of rice grains existed signiifcant difference (P<0.05) in 20 rice cultivars under the same Cd level in soil. The Cd concentrations of rice grains of the CK, T1 and T2 treatments were in the range of 0.143–0.202, 0.128–0.458 and 0.332–0.806 mg kg–1, respectively. Marked differences of the ratios of Cd concentration for soil to rice grain (BCFs) and transfer factors (TFs, root to grain and straw to grain) among the tested cultivars were observed in this study. The bioconcentration factors (BCFgrain) and TFs of the 20 rice cultivars were 0.300–1.112 and 0.342–0.817, respectively. The TFs of Cd from straw to grain ranged from 0.366 to 1.71, with signiifcant differences among these 20 rice cultivars. The bioconcentration factors (BCFgrain) and TFs among the 20 rice cultivars ranged from 0.300–1.112 and 0.342–0.817, respectively. The species-sensitivity distribu-tion (SSD) of Cd sensitivity of the rice species could be iftted wel with Burr-III (R2=0.987) based on the data of BCFs. The toxicity threshold of Cd derived from SSD for the paddy soil was 0.507 mg kg–1 in the present study.

Distributional responses to climate change for alpine species of Cyananthus and Primula endemic to the Himalaya-Hengduan Mountains

Global warming increases the vulnerability of plants, especially alpine herbaceous species, to local extinction. In this study, we collected species distribution information from herbarium specimens for ten selected Cyananthus and Primula alpine species endemic to the Himalaya-Hengduan Mountains(HHM).Combined with climate data from WorldClim, we used Maximum Entropy Modeling(MaxEnt) to project distributional changes from the current time period to 2070. Our predictions indicate that, under a wide range of climate change scenarios, the distributions of all species will shift upward in elevation and northward in latitude; furthermore, under these scenarios, species will expand the size of their range. For the majority of the species in this study, habitats are available to mitigate upward and northward shifts that are projected to be induced by changing climate. If current climate projections, however, increase in magnitude or continue to increase past our projection dates, suitable habitat for future occupation by alpine species will be limited as we predict range contraction or less range expansion for some of the species under more intensified climate scenarios. Our study not only underscores the value of herbarium source information for future climate model projections but also suggests that future studies on the effects of climate change on alpine species should include additional biotic and abiotic factors to provide greater resolution of the local dynamics associated with species persistence under a warming climate.

Species and Distribution of Rice Root Nematode in Yunnan Province, China

Rice root nematodes, Hirschmanniella spp. parasitize in the roots of rice and water plantspread widely. Ten species of the genus Hirschmanniella Luc et Goody, 1964 (Nemata:Pratylenchidae) collected from the root of rice in Yunnan Province are reported. They areH. belli, H. caudacrena, H. diversa, H. gracilis, H. imamuri, H. mexicana, H. microtyla,H. mucronata, H. oryzae and H. spinicaudata, including seven species of importantpathogenic nematodes of rice and two dominant species H. oryzae and H. imamari. Generally,the trend of species composition pattern is H. oryzae and H. imamari, which is a commoncomposition pattern in the world, but the species composition mode varies with thedifference of altitude and latitude. Their distribution relates to altitude and latitudeclosely, and also to the type of rice, such as indica or japonica rice.