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Analysis of Genetic Alterations in TP53 Gene in Breast Cancer - A Secondary Publication
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作者 Baqaur Rehman Muhammad Abubakar +1 位作者 Muhammad Naeem Kiani Rooma Ayyoub 《Proceedings of Anticancer Research》 2024年第3期25-35,共11页
Tumor protein p53 (TP53) mediates DNA repair and cell proliferation in growing cells. The TP53 gene is a tumor suppressor that regulates the expression of target genes in response to multiple cellular stress factors. ... Tumor protein p53 (TP53) mediates DNA repair and cell proliferation in growing cells. The TP53 gene is a tumor suppressor that regulates the expression of target genes in response to multiple cellular stress factors. Key target genes are involved in crucial cellular events such as DNA repair, cell cycle regulation, apoptosis, metabolism, and senescence. TP53 genetic variants and the activity of the wild-type p53 protein (WT-p53) have been linked to a wide range of tumorigenesis. Various genetic and epigenetic alterations, including germline and somatic mutations, loss of heterozygosity, and DNA methylation, can alter TP53 activity, potentially resulting in cancer initiation and progression. This study was designed to screen three reported mutations in the DNA-binding domain of the p53 protein in breast cancer, to evaluate the relative susceptibility and risk associated with breast cancer in the local population. Genomic DNA was isolated from 30 breast tumor tissues along with controls. Tetra and Tri ARMS PCR were performed to detect mutations in the TP53 coding region. For SNPs c.637C>T and c.733C>T, all analyzed cases were homozygous for the wild-type allele ‘C,’ while for SNP c.745A>G, all cases were homozygous for the wild-type allele ‘A.’ These results indicate no relevance of these three SNPs to cancer progression in our study cohort. Additionally, the findings from whole exon sequencing will help to predict more precise outcomes and assess the importance of TP53 gene mutations in breast cancer patients. 展开更多
关键词 Breast cancer p53 gene expression MUTATION SNpS
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乳腺癌组织miR-1247-5p表达及其靶基因生物信息学预测研究
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作者 陈芳 王仡阳 马方婧 《中国现代普通外科进展》 CAS 2024年第6期453-457,共5页
目的:探讨微小核糖核酸-1247-5p(miR-1247-5p)在乳腺癌组织中的表达,并对其预测的靶基因进行生物信息学分析。方法:收集2019年6月至2020年12月本院手术治疗的104例乳腺癌患者癌组织及其癌旁组织。RT-PCR检测标本中miR-1247-5p的相对表达... 目的:探讨微小核糖核酸-1247-5p(miR-1247-5p)在乳腺癌组织中的表达,并对其预测的靶基因进行生物信息学分析。方法:收集2019年6月至2020年12月本院手术治疗的104例乳腺癌患者癌组织及其癌旁组织。RT-PCR检测标本中miR-1247-5p的相对表达量;比较不同临床病理特征患者癌组织miR-1247-5p表达;预测miR-1247-5p的靶基因;采用DAVID数据库对miR-1247-5p靶基因进行功能和通路富集分析;String数据库对miR-1247-5p靶基因进行互作分析。结果:miR-1247-5p在乳腺癌组织中的表达水平较癌旁组织下调(P<0.05)。miR-1247-5p潜在靶基因38个,其靶基因功能主要富集于RNA聚合酶Ⅱ启动子的转录调控、基因表达/转录调控、质膜部分、突触小体、蛋白质结合、poly(A)RNA结合等;参与的通路主要富集于癌症通路、细胞因子与细胞因子受体的相互作用、磷脂酰肌醇3激酶(PI3K)-蛋白激酶B(Akt)信号通路等。磷酸酯酶与张力蛋白同源物(PTEN)、上皮生长因子受体(EGFR)、假尿苷酸合酶1(PUS1)的编码蛋白质在miR-1247-5p基因靶基因蛋白质互作网络(PPI)中关键节点位置。结论:miR-1247-5p在乳腺癌组织中的表达下调,其靶基因富集于多个生物学过程及与肿瘤相关的信号转导通路上,miR-1247-5p可能通过调控其靶基因的表达参与乳腺癌的发生发展过程。 展开更多
关键词 乳腺肿瘤 微小核糖核酸-1247-5p 靶基因 生物信息学
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Role of p53 suppression in the pathogenesis of hepatocellular carcinoma 被引量:2
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作者 Heena B Choudhary Satish K Mandlik Deepa S Mandlik 《World Journal of Gastrointestinal Pathophysiology》 2023年第3期46-70,共25页
In the world,hepatocellular carcinoma(HCC)is among the top 10 most prevalent malignancies.HCC formation has indeed been linked to numerous etiological factors,including alcohol usage,hepatitis viruses and liver cirrho... In the world,hepatocellular carcinoma(HCC)is among the top 10 most prevalent malignancies.HCC formation has indeed been linked to numerous etiological factors,including alcohol usage,hepatitis viruses and liver cirrhosis.Among the most prevalent defects in a wide range of tumours,notably HCC,is the silencing of the p53 tumour suppressor gene.The control of the cell cycle and the preservation of gene function are both critically important functions of p53.In order to pinpoint the core mechanisms of HCC and find more efficient treatments,molecular research employing HCC tissues has been the main focus.Stimulated p53 triggers necessary reactions that achieve cell cycle arrest,genetic stability,DNA repair and the elimination of DNA-damaged cells’responses to biological stressors(like oncogenes or DNA damage).To the contrary hand,the oncogene protein of the murine double minute 2(MDM2)is a significant biological inhibitor of p53.MDM2 causes p53 protein degradation,which in turn adversely controls p53 function.Despite carrying wt-p53,the majority of HCCs show abnormalities in the p53-expressed apoptotic pathway.High p53 in-vivo expression might have two clinical impacts on HCC:(1)Increased levels of exogenous p53 protein cause tumour cells to undergo apoptosis by preventing cell growth through a number of biological pathways;and(2)Exogenous p53 makes HCC susceptible to various anticancer drugs.This review describes the functions and primary mechanisms of p53 in pathological mechanism,chemoresistance and therapeutic mechanisms of HCC. 展开更多
关键词 Hepatocellular carcinoma p53 Tumour suppressor gene Murine double minute 2 CHEMORESISTANCE
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微小扇头蜱P0基因的克隆及其编码蛋白的生物信息学分析
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作者 李中波 杨甜 +1 位作者 罗世民 黄翠琴 《浙江农业学报》 CSCD 北大核心 2024年第8期1800-1810,共11页
为探究微小扇头蜱P0基因序列特征,预测P0蛋白的理化性质和二、三级结构,筛选出P0蛋白的B、T优势抗原表位,本研究克隆了微小扇头蜱P0基因,运用Clustal X软件分析P0基因序列特征,用在线软件EXPASY、PRABI和SWISS-MODEL预测P0蛋白的理化性... 为探究微小扇头蜱P0基因序列特征,预测P0蛋白的理化性质和二、三级结构,筛选出P0蛋白的B、T优势抗原表位,本研究克隆了微小扇头蜱P0基因,运用Clustal X软件分析P0基因序列特征,用在线软件EXPASY、PRABI和SWISS-MODEL预测P0蛋白的理化性质和二、三级结构,用在线软件ABCpred Prediction、Scratch、IEDB和NetCTL筛选P0蛋白的B、T优势抗原表位。试验结果显示:微小扇头蜱P0基因全长957 bp,碱基A含量为24.0%,T含量为20.3%,G含量为27.5%,C含量为28.2%,A+T含量为44.3%,G+C含量为55.7%,共编码318个氨基酸;P0蛋白分子量为34 ku,理论等电点(pI)为5.86,平均亲水系数为-0.153,不稳定指数为38.15;P0蛋白的二级结构含163个α螺旋(占比51.25%),130个无规卷曲(占比40.88%),25个延伸链(占比7.86%),其中以α螺旋为主要结构;P0蛋白的三级结构以α螺旋的含量最高,该蛋白的全局模型质量评估(global model quality estimation, GMQE)、定性模型能量分析(qualitative model energy analysis, QMEAN)值分别为0.49和0.52±0.05,无信号肽和跨膜结构域,但存在40个磷酸化位点和1个糖基化位点;P0蛋白有13个B淋巴细胞优势抗原表位和6个T淋巴细胞优势抗原表位。综上所述,微小扇头蜱P0基因序列呈GC偏好,P0蛋白是以α螺旋为主要结构成分的亲水性酸蛋白,具有B、T淋巴细胞优势抗原表位,是今后研制防控微小扇头蜱疫苗的理想靶标。 展开更多
关键词 微小扇头蜱 p0基因 p0蛋白 抗原表位
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Study of pathogenic genes in a pedigree with familial dilated cardiomyopathy
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作者 Xin-Ru Zhang Hang Ren +2 位作者 Fang Yao Yang Liu Chun-Li Song 《World Journal of Clinical Cases》 SCIE 2023年第11期2412-2422,共11页
BACKGROUND Dilated cardiomyopathy(DCM)is a genetically heterogeneous cardiac disorder characterized by left ventricular dilation and contractile dysfunction.The substantial genetic heterogeneity evident in patients wi... BACKGROUND Dilated cardiomyopathy(DCM)is a genetically heterogeneous cardiac disorder characterized by left ventricular dilation and contractile dysfunction.The substantial genetic heterogeneity evident in patients with DCM contributes to variable disease severity and complicates overall prognosis,which can be very poor.AIM To identify pathogenic genes in DCM through pedigree analysis.METHODS Our research team identified a patient with DCM in the clinic.Through invest-igation,we found that the family of this patient has a typical DCM pedigree.High-throughput sequencing technology,next-generation sequencing,was used to sequence the whole exomes of seven samples in the pedigree.RESULTS A novel and potentially pathogenic gene mutation-ANK2p.F3067L-was discovered.The mutation was completely consistent with the clinical information for this DCM pedigree.Sanger sequencing was used to further verify the locus of the mutation in pedigree samples.These results were consistent with those of high-throughput sequencing.CONCLUSIONS ANK2p.F3067L is considered a novel and potentially pathogenic gene mutation in DCM. 展开更多
关键词 Dilated cardiomyopathy gene mutation Whole exomes sequencing Sanger sequencing ANK2p.F3067L potentially pathogenic gene
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机械振动对去卵巢大鼠骨质疏松性骨折愈合中CGRP和SP表达的影响
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作者 熊亭亭 胡曼娅 +5 位作者 王延留 汤振达 代沂航 吴佳 濮烨 汪学红 《中国骨质疏松杂志》 CAS CSCD 北大核心 2024年第6期813-817,共5页
目的探讨机械振动对去卵巢后骨质疏松性骨折大鼠骨折端愈合过程中神经肽降钙素基因相关肽(calcitonin gene-related peptide,CGRP)和P物质(substance P,SP)表达的影响。方法选取3月龄的雌性Wistar大鼠30只,按照随机法分为对照组(Sham)... 目的探讨机械振动对去卵巢后骨质疏松性骨折大鼠骨折端愈合过程中神经肽降钙素基因相关肽(calcitonin gene-related peptide,CGRP)和P物质(substance P,SP)表达的影响。方法选取3月龄的雌性Wistar大鼠30只,按照随机法分为对照组(Sham)、去卵巢组(OVX)、振动组(OVX-V),每组10只。摘除去卵巢组和振动组大鼠的卵巢以建立骨质疏松模型,对照组则去除同质量脂肪组织构建假去卵巢骨质疏松模型,同时对振动组大鼠进行频率35 Hz、振幅2 mm、加速度0.5 g的振动干预,持续20 min,其他组放于关闭的振动台上自由活动20 min,每周5 d。在干预2周和6周后,拍摄大鼠骨折端X线片观察对比3组的愈合情况,采用酶联免疫吸附测定(ELISA)技术来测定骨折端CGRP和SP的表达水平。结果对照组与振动组在干预2周后大鼠骨折愈合率较去卵巢组高,振动组在干预6周后大鼠骨折愈合率高于其他两组(P<0.05)。在干预2周后,振动组大鼠骨组织CGRP含量[0.464±0.018]和SP含量[0.450±0.019]均高于去卵巢组但明显低于对照组(P<0.05)。在干预6周后,振动组大鼠骨组织中CGRP含量[0.632±0.016]和SP含量[0.636±0.017]呈上升趋势且明显高于去卵巢组,但仍低于对照组(P<0.05)。结论机械振动有助于提高去卵巢骨质疏松骨折大鼠骨组织中神经肽CGRP和SP的表达水平,从而增加成骨细胞活性并抑制骨吸收,加速骨折愈合。 展开更多
关键词 机械振动 骨质疏松性骨折 绝经后骨质疏松 降钙素基因相关肽 p物质 大鼠
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Allotetraploidization event of Coptis chinensis shared by all Ranunculales
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作者 Yan Zhang Weina Ge +15 位作者 Jia Teng Yanmei Yang Jianyu Wang Zijian Yu Jiaqi Wang Qimeng Xiao Junxin Zhao Shaoqi Shen Yishan Feng Shoutong Bao Yu Li Yuxian Li Tianyu Lei Yuxin Pan Lan Zhang Jinpeng Wang 《Horticultural Plant Journal》 SCIE CAS CSCD 2024年第1期288-303,共16页
Coptis chinensis Franch.,also named Chinese goldthread is a member of Ranunculaceae in the order Ranunculales and represents an important lineage of early eudicots with traditional medicinal value.In our study,by usin... Coptis chinensis Franch.,also named Chinese goldthread is a member of Ranunculaceae in the order Ranunculales and represents an important lineage of early eudicots with traditional medicinal value.In our study,by using syntenic analysis combined with phylogenomic analysis of C.chinensis and four other representative genomes from basal and core eudicots,we confirmed that the WGD event in C.chinensis was shared by Aquilegia coerulea and Papaver somniferum L.and quickly occurred after Ranunculales diverged from other eudicots,likely a Ranunculales common tetraploidization(RCT).The synonymous nucleotide substitutions at synonymous sites distribution of syntenic blocks across these genomes showed that the evolutionary rate of the P.somniferum genome is faster than that of the C.chinensis genome by approximately 13.7%,possibly due to Papaveraceaes having an additional special tetraploidization event(PST).After Ks correction,the RCT dated to 115—130 million years ago(MYA),which was close to the divergence of Ranunculaceaes and Papaveraceaes approximately115.45—130.51 MYA.Moreover,we identified homologous genes related to polyploidization and speciation and constructed multiple sequence alignments with different reference genomes.Notably,the event-related subgenomes in the basal genomes all showed genomic fractionation bias,suggesting a likely allopolyploid nature of the RCT,PST and T-Alpha and T-Beta events in Tetracentron sinense.In addition,we detected that the sixteen P450 subfamilies were markedly expanded in the genomes of Ranunculales,and most of them were related to the RCT and PST events.We constructed a new platform for Early Eudicot Comparative Genomic Research(http://www.cgrpoee.top/index.html)to store more information.In summary,our findings support the WGD of C.chinensis shared by Ranunculales,which is likely an allotetraploidization event.This present effort offered new insights into the evolution of key polyploidization events and the genes related to secondary metabolites during the diversification of early eudicots. 展开更多
关键词 Coptis chinensis RANUNCULALES pOLYpLOIDIZATION Genomic fractionation p450 genes
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ExosomalmicroRNA let-7c-5p enhances cell malignant characteristics by inhibiting TAGLN in oral cancer
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作者 YI LI TIANYI WANG +3 位作者 HAORAN DING SHIYONG ZHUANG XIAOBO DAI BING YAN 《Oncology Research》 SCIE 2024年第10期1623-1635,共13页
Background:Oral cancer,a malignancy that is prevalent worldwide,is often diagnosed at an advanced stage.MicroRNAs(miRNAs)in circulating exosomes have emerged as promising cancer biomarkers.The role of miRNA let-7c-5p ... Background:Oral cancer,a malignancy that is prevalent worldwide,is often diagnosed at an advanced stage.MicroRNAs(miRNAs)in circulating exosomes have emerged as promising cancer biomarkers.The role of miRNA let-7c-5p in oral cancer remains underexplored,and its potential involvement in tumorigenesis warrants comprehensive investigation.Methods:Serum samples from 30 patients with oral cancer and 20 healthy controls were used to isolate exosomes and quantify their RNA content.Isolation of the exosomes was confirmed through transmission electron microscopy.Quantitative PCR was used to assess the miRNA profiles.The effects of let-7c-5p and TAGLN overexpression on oral cancer cell viability,migration,and invasion were analyzed via CCK-8 and Transwell assays.Moreover,we conducted mRNA sequencing of exosomal RNA from exosomes overexpressing let-7c-5p to delineate the gene expression profile and identify potential let-7c-5p target genes.Results:let-7c-5p was upregulated in serumderived exosomes of patients with oral cancer.Overexpression of let-7c-5p in the TCA8113 and CAL-27 cell lines enhanced their proliferative,migratory,and invasive capacities,and overexpression of let-7c-5p cell-derived exosomes promoted oral cancer cell invasiveness.Exosomal mRNA sequencing revealed 2,551 differentially expressed genes between control cell-derived exosomes and overexpressed let-7c-5p cell-derived exosomes.We further identified TAGLN as a direct target of let-7c-5p,which has been implicated in modulating the oncogenic potential of oral cancer cells.Overexpression of TAGLN reverses the promoting role of let-7c-5p on oral cancer cells.Conclusion:Our findings highlight the role of exosomal let-7c-5p in enhancing oral cancer cell aggressiveness by downregulating TAGLN expression,highlighting its potential as a diagnostic and therapeutic strategy. 展开更多
关键词 Oral cancer Exosomal microRNA let-7c-5p Tumorigenesis biomarkers gene expression profiling TAGLN
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Exercise-induced modulation of miR-149-5p and MMP9 in LPS-triggered diabetic myoblast ER stress: licorice glycoside E as a potential therapeutic target
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作者 Yi Du Hong Liu 《Traditional Medicine Research》 2024年第8期23-34,共12页
Background:This study explores the relationship between endoplasmic reticulum(ER)stress and diabetes,particularly focusing on the impact of physical exercise on ER stress mechanisms and identifying potential therapeut... Background:This study explores the relationship between endoplasmic reticulum(ER)stress and diabetes,particularly focusing on the impact of physical exercise on ER stress mechanisms and identifying potential therapeutic drugs and targets for diabetes-related sepsis.The research also incorporates traditional physical therapy perspectives,emphasizing the genomic insights gained from exercise therapy in disease management and prevention.Methods:Gene analysis was conducted on the GSE168796 and GSE94717 datasets to identify ER stress-related genes.Gene interactions and immune cell correlations were mapped using GeneCard and STRING databases.A screening of 2,456 compounds from the TCMSP database was performed to identify potential therapeutic agents,with a focus on their docking potential.Techniques such as luciferase reporter gene assay and RNA interference were used to examine the interactions between microRNA-149-5p and MMP9.Results:The study identified 2,006 differentially expressed genes and 616 miRNAs.Key genes like MMP9,TNF-α,and IL1B were linked to an immunosuppressive state.Licorice glycoside E demonstrated high affinity for MMP9,suggesting its potential effectiveness in treating diabetes.The constructed miRNA network highlighted the regulatory roles of MMP9,IL1B,IFNG,and TNF-α.Experimental evidence confirmed the binding of microRNA-149-5p to MMP9,impacting apoptosis in diabetic cells.Conclusion:The findings highlight the regulatory role of microRNA-149-5p in managing MMP9,a crucial gene in diabetes pathophysiology.Licorice glycoside E emerges as a promising treatment option for diabetes,especially targeting MMP9 affected by ER stress.The study also underscores the significance of physical exercise in modulating ER stress pathways in diabetes management,bridging traditional physical therapy and modern scientific understanding.Our study has limitations.It focuses on the microRNA-149-5p-MMP9 network in sepsis,using cell-based methods without animal or clinical trials.Despite strong in vitro findings,in vivo studies are needed to confirm licorice glycoside E’s therapeutic potential and understand the microRNA-149-5p-MMP9 dynamics in real conditions. 展开更多
关键词 ER stress diabetes physical exercise gene expression microRNA-149-5p MMp9 licorice glycoside E traditional physical therapy genomics insights
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致病性猪沙门菌四环素耐药基因tetB的PCR检测 被引量:8
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作者 刘维红 徐引弟 +3 位作者 郭爱珍 贾爱卿 刘军发 陈焕春 《中国抗生素杂志》 CAS CSCD 北大核心 2007年第1期51-55,共5页
目的检测临床分离猪源致病性沙门菌四环素的耐药基因,确定沙门菌四环素耐药基因类型。方法用KB法测定分离株对四环素等21种抗生素的耐药情况,用PCR方法检测四环素耐药基因tetA、tetB、tetC、tetD、tetE、tetG及tetK,并对扩增产物进行测... 目的检测临床分离猪源致病性沙门菌四环素的耐药基因,确定沙门菌四环素耐药基因类型。方法用KB法测定分离株对四环素等21种抗生素的耐药情况,用PCR方法检测四环素耐药基因tetA、tetB、tetC、tetD、tetE、tetG及tetK,并对扩增产物进行测序。结果临床分离株全部对四环素耐药,33株沙门菌中有29株扩增出tetB特异性片段,基因序列与参考菌的同源性为99%,tetB检测与药敏试验阳性符合率为87.9%。结论tetB的PCR检测对四环素耐药性具有较高的特异性,tetB基因是决定本试验中临床分离株四环素耐药的主要基因,为四环素耐药性的分子流行病学监测提供了依据。 展开更多
关键词 沙门菌 四环素耐药基因 tetb pCR
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A型产气荚膜梭菌tetB(P)耐药基因核苷酸序列与蛋白结构分析 被引量:1
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作者 冶贵生 马玉花 +5 位作者 张爽 梅成和 张晓芬 韩志辉 贾跃宁 邹勇 《甘肃农业大学学报》 CAS CSCD 北大核心 2015年第4期160-164,共5页
为了对产气荚膜梭菌tetB(P)耐药基因进行分析,通过生物软件设计引物,扩增A型产气荚膜梭菌tetB(P)耐药基因,测序后对tetB(P)基因核苷酸序列与蛋白结构进行分析.结果表明:分离株tetB(P)基因长度为1 959bp,编码652个氨基酸.与参考菌株CW92... 为了对产气荚膜梭菌tetB(P)耐药基因进行分析,通过生物软件设计引物,扩增A型产气荚膜梭菌tetB(P)耐药基因,测序后对tetB(P)基因核苷酸序列与蛋白结构进行分析.结果表明:分离株tetB(P)基因长度为1 959bp,编码652个氨基酸.与参考菌株CW92、EHE-NE18的核苷酸序列同源性依次为99.7%、99.9%,氨基酸序列同源性依次为99.4%、99.8%.分离株tetB(P)蛋白亲水性氨基酸较多,无跨膜区,含有4个N-糖基化位点,1个cAMP和cGMP依赖性蛋白激酶磷酸化位点,9个蛋白激酶C磷酸化位点,12个酪蛋白激酶Ⅱ磷酸化位点,7个N-豆寇酰化位点,1个ATP/GTP结合位点基序,1个翻译型鸟苷酸结合域,三级结构主要是由α-螺旋、β折叠和无规则卷曲形成. 展开更多
关键词 A型产气荚膜梭菌 tetb(p)基因 序列分析 蛋白结构
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Cloning and Bioinformatics Analysis of P23 Gene from Theileria sergenti 被引量:5
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作者 金春梅 张守发 于龙政 《Agricultural Science & Technology》 CAS 2008年第3期56-58,84,共4页
[Objective] The aim of this study is to provide basis for developing genetic engineering vaccine and diagnostic kit for Theileria sergenti infection. [Objective] P23 gene of Theileria sergenti was amplified from its g... [Objective] The aim of this study is to provide basis for developing genetic engineering vaccine and diagnostic kit for Theileria sergenti infection. [Objective] P23 gene of Theileria sergenti was amplified from its genomic DNA by PCR amplification, and cloned into the pGEM-Easy vector; then the sequencing result was analyzed with bioinformatics methods. [Result] Whole length of the P23 gene from Theileria sergenti is 684 bp containing a 672 bp open reading frame. The deduced amino acid sequence (223 amino acid residues) contains a signal peptide of 19 amino acid residues and two fragments of transmembrane domains, with relative molecular weight of the 25.886 kD and with the pI of 9.22. The homology between the yielded sequence and Chitose of Theileria sergenti P23 gene(TS-Chitose type, D84446), Ikeda of Theileria sergenti P23 gene(TS-Ikeda type, D84447) reached 99% and 90%, respectively. The sequence has been accessed in GenBank(EU573168). [Conclusion] The protein encoded by the P23 gene has better stability and immunogenicity, thus can be used as the antigen candidate for preparing genetic engineering vaccine for Theileria sergenti. 展开更多
关键词 THEILERIA sergenti p23 gene CLONING BIOINFORMATICS
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P53-inducible Gene 3(PIG-3)在弥漫性大B细胞淋巴瘤中的表达及意义 被引量:2
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作者 朱锋 张鲁勤 +2 位作者 顾卫军 朱伟 郭玉琳 《中国实验血液学杂志》 CAS CSCD 北大核心 2013年第2期396-398,共3页
本研究旨在探究P53-inducible gene 3(PIG-3)在弥漫性大B细胞淋巴瘤(DLBCL)中的表达情况及其与淋巴瘤发病机制的相关性。应用免疫印迹(Western blot)和RT-PCR等方法,检测弥漫性大B细胞淋巴瘤患者和健康成年人PIG-3蛋白的表达情况,并判... 本研究旨在探究P53-inducible gene 3(PIG-3)在弥漫性大B细胞淋巴瘤(DLBCL)中的表达情况及其与淋巴瘤发病机制的相关性。应用免疫印迹(Western blot)和RT-PCR等方法,检测弥漫性大B细胞淋巴瘤患者和健康成年人PIG-3蛋白的表达情况,并判断其与淋巴瘤发病机制的相关性。结果表明,Western blot检测弥漫性大B细胞淋巴瘤细胞中PIG-3蛋白表达明显低于对照组,化疗后6个月PIG-3蛋白表达较化疗前升高。RT-PCR结果显示,扩增产物大小为1285 bp,与理论值吻合。结论:PIG-3表达下调可能与弥漫性大B细胞淋巴瘤发生密切相关,故PIG-3有可能作为弥漫性大B细胞淋巴瘤治疗及预后检测的一个重要指标。 展开更多
关键词 弥漫性大B细胞淋巴瘤 p53-inducible gene 3 免疫印迹 RT-pCR
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The Promoter Hypermethylation of DAPK Gene and pl6 Gene in Sera from Chinese Non-small Cell Lung Cancer Patients 被引量:1
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作者 林勍 陈龙邦 +1 位作者 唐永明 王晶 《The Chinese-German Journal of Clinical Oncology》 CAS 2006年第3期184-188,共5页
Objective: To evaluate the clinical significance of the aberrant methylation of DAPK gene and p16 gene in sera from 65 NSCLC patients from Nanjing General Hospital of Nanjing Command, China. Methods: A methylation-s... Objective: To evaluate the clinical significance of the aberrant methylation of DAPK gene and p16 gene in sera from 65 NSCLC patients from Nanjing General Hospital of Nanjing Command, China. Methods: A methylation-specific PCR (MSP) was performed for the detection of promoter hypermethylation of DAPK gene and p16 gene in blood DNA from 65 cases of NSCLC, and to analyze the relation of the aberrant methylation of DAPK gene and p16 gene and the clinicopathological data. Results: 30.8% (20/65) of the sera from 65 cases of NSCLC showed hypermethylation for DAPK promoter and 43.1% (28/65) the same for p16 promoter, whereas no methylated DAPK gene promoter and p16 gene promoter were found in sera from the patients with lung benign diseases and normal controls. Methylated DAPK gene promoter and p16 gene promoter in sera were not closely correlated with the pathological classification, stage, metastasis and differentiation in NSCLC. Conclusion: Detection of the aberrant methylation of DAPK gene and p16 gene in blood DNA from NSCLC patients might offer an effective means for the earlier auxiliary diagnosis of the malignancy. 展开更多
关键词 NSCLC DApK gene p16 gene SERUM DNA methylation
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Cloning and Prokaryotic Expression of P23 Major Surface Protein Gene from Theileria sergenti 被引量:2
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作者 李文学 李海峰 金清洙 《Agricultural Science & Technology》 CAS 2010年第5期96-100,共5页
[Objective] The aim was to study cloning and prokaryotic expression of P23 major surface protein gene of Theileria sergenti. [Method] A pair of specific primers was designed according to the sequence of P23 major surf... [Objective] The aim was to study cloning and prokaryotic expression of P23 major surface protein gene of Theileria sergenti. [Method] A pair of specific primers was designed according to the sequence of P23 major surface protein of T. sergenti (D84447).The P23 gene was amplified by PCR from genomic DNA of T. sergenti and cloned into pMD18-T vector to construct recombinant clonal vector pMD18-P23. Positive clones were identified by PCR screening and restriction digestion. A recombinant expression plasmid pGEX-4T-P23 was constructed by subcloning the cloned P23 gene into the linearized pGEX-4T-1 vector and transformed into E. coli BL21. After introduction by IPTG,the expressed fusion protein was identified by SDS-PAGE and Western-blotting. [Result] The cloned gene has a total length of 507 bp. Sequencing result showed that the nucleotide sequence of the cloned P23 gene shared 99.4% identity with that of P23 published in GenBank (D84447). The expressed fusion protein was 46 ku in molecular mass. Induction opportunity of zhours after culture inoculation was the best,the induction time of 6 h was the best,and induction temperature of 34 ℃ was the best as well,IPTG of 1 mmol/L had little effect on the expression. Western-blotting indicated that recombinant protein was recognized by specific antibody. [Conclusion] This study would lay a foundation for further research on the prevention and diagnose of T. sergenti. 展开更多
关键词 Theileria sergenti p23 major surface protein gene prokaryotic expression
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Construction of DNA Vaccine for FMDV P1 Gene and Immunization Experiment
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作者 史秋梅 高桂生 +2 位作者 张艳英 高光平 张东林 《Agricultural Science & Technology》 CAS 2013年第8期1069-1071,共3页
[Objective] This study aimed to construct DNA vaccine of foot-and-mouth disease (FMD).[Method] Plasmid carriers plESZP1 and pUTK3CP1 with PRV were constructed for FMDV P1 gene expression.Mice were immunized,and thei... [Objective] This study aimed to construct DNA vaccine of foot-and-mouth disease (FMD).[Method] Plasmid carriers plESZP1 and pUTK3CP1 with PRV were constructed for FMDV P1 gene expression.Mice were immunized,and their antibody level was detected.The two eukaryotic expression plasmids constructed were transfected into Vero cells.PCR,IFA and Westem-blot were carried out to detect the transcription and expression of the objective gene.Balb/C mice were intramuscularly inoculated with the DNA plasmid which expressed the target gene correctly,and the antibody level in mice was detected by the means of ELISA and serum neutralization (SN).[Result] DNA plasmid carrying P1 gene which encodes FMDV capsid protein caused specific body fluid immunoreaction in mice,and the antibody level of anti-FMDV had no difference in the mice induced by the two recombinant plasmids.[Conclusion] This study lays a foundation for evaluating the genetically modified vaccine by immunizing animals with recombinant PRV containing the FMDV P1 gene and recombinant virus. 展开更多
关键词 FMDV p1 gene DNA plasmid Immunization experiment
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p21^(WAF1/CIP1) Gene DNA Sequence Change and Their Relationship with the Phenotype of Human Osteosarcoma
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作者 张春林 廖威明 +2 位作者 李佛保 曾炳芳 曾益新 《The Chinese-German Journal of Clinical Oncology》 CAS 2004年第1期37-41,66,共6页
Objective: To investigate the p21WAF1 /CIP1gene DNA sequence change and their relationship with the phenotype of human osteosarcoma. Methods: p21WAF1 /CIP1gene DNA of 36 osteosarcoma spec- ... Objective: To investigate the p21WAF1 /CIP1gene DNA sequence change and their relationship with the phenotype of human osteosarcoma. Methods: p21WAF1 /CIP1gene DNA of 36 osteosarcoma spec- imens was examined by using polymerase chain reaction-single strand conformation polymorphism (PCR- SSCP) method. The PCR products were sequenced directly. Results: In p21WAF1 /CIP1 gene exon3 of 36 cases of human osteosarcoma, the change of C→T in the p21WAF1 /CIP1gene CDNA sequence of position 609th occurred in 17 cases with the incidence being 44.4%. In 10 normal blood samples, DNA sequence analysis showed the change of C→T in the p21WAF1 /CIP1gene CDNA sequence of position 609th occurred in 8 cases with the incidence being 80%. Conclusion: The novel location of p21WAF1 /CIP1gene polymorphism of osteosarcoma, but not mutation was de?ned, and this location might provide the meaningful reference for the further research of p21WAF1/CIP1 gene.p2lWAF1/CIP1基因DNA序列分析及其与骨肉瘤表型的关系 展开更多
关键词 p21WAF1 /CIp1 gene OSTEOSARCOMA pCR-SSCp DNA sequencing
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Overexpression and mutations of tumor suppressor gene p53 in hepatocellular carcinoma
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作者 王东 史景泉 《World Journal of Gastroenterology》 SCIE CAS CSCD 1996年第3期161-164,共4页
AIMS To examine the prevalance of p53 mutations in hepatocellular carcinoma (HCC) from Chongqing area and the relationship between the p53 mutations and clinicopathological features of HCC,as well as the risk factors.... AIMS To examine the prevalance of p53 mutations in hepatocellular carcinoma (HCC) from Chongqing area and the relationship between the p53 mutations and clinicopathological features of HCC,as well as the risk factors. METHODS The overexpression and point mutations of tumor suppressor gene p53 in 38 cases of HCC were detected by a sensitive antigen retrieval fluid (ARF) immunohistochemical method and polymerase chain re- action(PCR)-restriction fragment length polymorphism (RFLP),and single strand conformation polymorphism (SSCP)-silver staining analysis. RESULTS The results showed that 16 of 38 HCCs had positive p53 protein (42.1%),7 HCCs had p53 mutation at 249 (18.4 % ) and 2 HCCS had point muta- tion within exon 7 other than 249. Among 9 cases of HCC with mutations,8 cases demonstrated positive p53 protein,its coincidental rate was 88.9%. The overexpression and mutations of p53 were significantly related to the differentiation and metastasis of HCCs. The frequency of p53 mutations was consistent with high prevalence of HBV and a moderate aflatoxin B1 (AFB1) exposure in our area. CONCLUSIONS The results suggest that AFB1 acts synergistically with HBV in the generation of p53 mutations. Furthermore,dietary exposure to AFB1 may mainly contribute to the tumor specific mutation at codon 249,while HBV may account for other scattered mutations in HCC. 展开更多
关键词 liver neoplasms geneS SUppRESSOR tumor protein p53 point mutation
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p53 gene mutations in primary gastric cancer
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作者 李中信 《World Journal of Gastroenterology》 SCIE CAS CSCD 1996年第1期41-43,共3页
AIMS p53 gene is one of the focuses in the study of tu- mour suppressor genes.So far,there is still controversy about the relationship between p53 alterations and clinicolpathological parameters of gastic cancers such... AIMS p53 gene is one of the focuses in the study of tu- mour suppressor genes.So far,there is still controversy about the relationship between p53 alterations and clinicolpathological parameters of gastic cancers such as macroscopic classifica- tion,stage,degree of differentiation,depth of tumour invasion and lymphonod metastasis.Tamura has reported that p53 gene mutations mainly occur in the aneuploid tumours.But in China, nothing is reported in this field of study.Our aim is to analyze the relationship between p53 gene mutations and these param- eters including DNA ploidy in Chinese primary gasrtic cancers. METHODS Mutations of the p53 gene in exon5-8 were examined in 20 cases of primary gasric cancer by PCR-SSCP (Polymerase-chain-reaction-single-strand-conforma- tion-polymorphism)analysis. RESULTS Mutations were detected in 8(40%)cases:2 cases in exon5-6,2 cases in exon7,4 cases in exon8.These mutations were detected from stage 0 to stage Ⅲ No significant association was found between p53 gene mutations and the clinicopathological parameters such as macroscopic classifico- tion,degree of histological differentiation,depth of tumour in- vasion and lymphonod metastasis.In addition,66.7%(6 of 9) of aneuploid tumours had p53 mutations and only 18.2%(2 of 11)of diploid tumours had mutations. CONCLUSIONS These results suggest that p53 gene muta- tions are related to DNA ploidy alterations and that p53 gene is one of the important turnout suppressor genes in human gastric cancer. 展开更多
关键词 genes p53 stomach neoplasms MUTATION polymerase chain reaction
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胃食管反流病患者血清炎症因子水平、SP及CGRP的相关性分析 被引量:5
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作者 李兰花 王利丽 《胃肠病学和肝病学杂志》 CAS 2023年第12期1333-1338,共6页
目的研究胃食管反流病(gastroesophageal reflux disease,GERD)患者血清炎症因子水平、P物质(substance P,SP)及降钙素基因相关肽(calcitonin gene-related peptide,CGRP)的相关性。方法收集2018年5月至2021年5月本院128例GERD患者临床... 目的研究胃食管反流病(gastroesophageal reflux disease,GERD)患者血清炎症因子水平、P物质(substance P,SP)及降钙素基因相关肽(calcitonin gene-related peptide,CGRP)的相关性。方法收集2018年5月至2021年5月本院128例GERD患者临床资料,根据GERD症状评分分级,将患者分为轻度、中度、重度及危重度四组。比较不同病情程度患者血清炎症因子(IL-6、IL-8及TNF-α)、SP及CGRP水平。分析GERD患者血清炎症因子与SP、CGRP的关系。采用ROC分析血清炎症因子、SP及CGRP判断GERD病情程度的价值。结果128例患者中轻度组30例,中度组42例,重度组34例,危重组22例。四组患者血清IL-6、IL-8、TNF-α、SP及CGRP水平比较,差异有统计学意义(P<0.05)。四组患者间两两比较,血清IL-6、IL-8、TNF-α、SP及CGRP水平差异有统计学意义(P<0.05)。血清IL-6、IL-8及TNF-α与SP、CGRP呈显著正相关性(P<0.05)。经多因素Logistic回归分析证实,IL-6、IL-8、TNF-α、CGRP及SP水平是影响GERD患者病情程度的危险因素(均P<0.05)。经ROC分析,血清IL-6、IL-8、TNF-α、CGRP及SP对判断GERD病情程度具有较高应用价值。CGRP和SP与血清炎症因子判断GERD患者病情程度的AUC病情程度比较,差异均无统计学意义(P>0.05)。结论GERD患者病情程度与血清炎症因子、SP及CGRP相关,且血清炎症因子与SP、CGRP间存在相关性,二者发挥协同作用,参与GERD病理进程。 展开更多
关键词 胃食管反流病 炎症因子 p物质 降钙素原基因相关肽
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