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Cyber Resilience through Real-Time Threat Analysis in Information Security
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作者 Aparna Gadhi Ragha Madhavi Gondu +1 位作者 Hitendra Chaudhary Olatunde Abiona 《International Journal of Communications, Network and System Sciences》 2024年第4期51-67,共17页
This paper examines how cybersecurity is developing and how it relates to more conventional information security. Although information security and cyber security are sometimes used synonymously, this study contends t... This paper examines how cybersecurity is developing and how it relates to more conventional information security. Although information security and cyber security are sometimes used synonymously, this study contends that they are not the same. The concept of cyber security is explored, which goes beyond protecting information resources to include a wider variety of assets, including people [1]. Protecting information assets is the main goal of traditional information security, with consideration to the human element and how people fit into the security process. On the other hand, cyber security adds a new level of complexity, as people might unintentionally contribute to or become targets of cyberattacks. This aspect presents moral questions since it is becoming more widely accepted that society has a duty to protect weaker members of society, including children [1]. The study emphasizes how important cyber security is on a larger scale, with many countries creating plans and laws to counteract cyberattacks. Nevertheless, a lot of these sources frequently neglect to define the differences or the relationship between information security and cyber security [1]. The paper focus on differentiating between cybersecurity and information security on a larger scale. The study also highlights other areas of cybersecurity which includes defending people, social norms, and vital infrastructure from threats that arise from online in addition to information and technology protection. It contends that ethical issues and the human factor are becoming more and more important in protecting assets in the digital age, and that cyber security is a paradigm shift in this regard [1]. 展开更多
关键词 Cybersecurity Information Security Network Security Cyber Resilience Real-Time Threat analysis Cyber Threats Cyberattacks Threat Intelligence Machine Learning Artificial Intelligence Threat Detection Threat Mitigation Risk Assessment Vulnerability Management Incident Response Security Orchestration Automation Threat Landscape Cyber-Physical Systems Critical Infrastructure Data Protection Privacy Compliance Regulations Policy Ethics CYBERCRIME Threat Actors Threat Modeling Security Architecture
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Evaluation and Analysis of Hospital Disaster Preparedness in Jeddah 被引量:1
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作者 Nidaa A. Bajow Shahnaz M. Alkhalil 《Health》 2014年第19期2668-2687,共20页
Introduction: Disaster damage to health systems is a human and health tragedy, results in huge economic losses, deals devastating blows to development goals, and shakes social confidence. Hospital disaster preparednes... Introduction: Disaster damage to health systems is a human and health tragedy, results in huge economic losses, deals devastating blows to development goals, and shakes social confidence. Hospital disaster preparedness presents complex clinical operation. It is difficult philosophical challenge. It is difficult to determine how much time, money, and effort should be spent in preparing for an event that may not occur. Health facilities whether hospitals or rural health clinics, should be a source of strength during emergencies and disasters. They should be ready to save lives and to continue providing essential emergencies and disasters. Jeddah has relatively a level of disaster risk which is attributable to its geographical location, climate variability, topography, etc. This study investigates the hospital disaster preparedness (HDP) in Jeddah. Methods: Questionnaire was designed according to five Likert scales. It was divided into eight fields of 33 indicators: structure, architectural and furnishings, lifeline facilities’ safety, hospital location, utilities maintenance, surge capacity, emergency and disaster plan, and control of communication and coordination. Sample of six hospitals participated in the study and rated to the extent of disaster preparedness for each hospital disaster preparedness indicators. Two hazard tools were used to find out the hazards for each hospital. An assessment tool was designed to monitor progress and effectiveness of the hospitals’ improvement. Weakness was found in HDP level in the surveyed hospitals. Disaster mitigation needs more action including: risk assessment, structural and non-structural prevention, and preparedness for contingency planning and warning and evacuation. Conclusion: The finding shows that hospitals included in this study have tools and indicators in hospital preparedness but with lack of training and management during disaster. So the research shed light on hospital disaster preparedness. Considering the importance of preparedness in disaster, it is necessary for hospitals to understand that most of hospital disaster preparedness is built in the hospital system. 展开更多
关键词 HOSPITAL DISASTER PREPAREDNESS Indicators (HDPI) HOSPITAL DISASTER PREPAREDNESS (HDP) Hazard Vulnerability analysis (HVA) Mass CASUALTY Incident (MCI) Full-Scale Exercises (FSE) Emergency Medical Services (EMS) Joint Commission on Accreditation of Healthcare Organizations (JCAHO) Pan American Health Organization (PAHO) Hypothesis (H)
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Identification of microRNAs and messenger RNAs involved in human umbilical cord mesenchymal stem cell treatment of ischemic cerebral infarction using integrated bioinformatics analysis 被引量:14
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作者 Yin-Meng Qu Xin Sun +3 位作者 Xiu-Li Yan Hang Jin Zhen-Ni Guo Yi Yang 《Neural Regeneration Research》 SCIE CAS CSCD 2019年第9期1610-1616,共7页
In recent years,a large number of differentially expressed genes have been identified in human umbilical cord mesenchymal stem cell(hUMSC)transplants for the treatment of ischemic cerebral infarction.These genes are i... In recent years,a large number of differentially expressed genes have been identified in human umbilical cord mesenchymal stem cell(hUMSC)transplants for the treatment of ischemic cerebral infarction.These genes are involved in various biochemical processes,but the role of microRNAs(miRNAs)in this process is still unclear.From the Gene Expression Omnibus(GEO)database,we downloaded two microarray datasets for GSE78731(messenger RNA(mRNA)profile)and GSE97532(miRNA profile).The differentially expressed genes screened were compared between the hUMSC group and the middle cerebral artery occlusion group.Gene ontology enrichment and pathway enrichment analyses were subsequently conducted using the online Database for Annotation,Visualization,and Integrated Discovery.Identified genes were applied to perform weighted gene co-suppression analyses,to establish a weighted co-expression network model.Furthermore,the protein-protein interaction network for differentially expressed genes from turquoise modules was built using Cytoscape(version 3.40)and the most highly correlated subnetwork was extracted from the protein-protein interaction network using the MCODE plugin.The predicted target genes for differentially expressed miRNAs were also identified using the online database starBase v3.0.A total of 3698 differentially expressed genes were identified.Gene ontology analysis demonstrated that differentially expressed genes that are related to hUMSC treatment of ischemic cerebral infarction are involved in endocytosis and inflammatory responses.We identified 12 differentially expressed miRNAs in middle cerebral artery occlusion rats after hUMSC treatment,and these differentially expressed miRNAs were mainly involved in signaling in inflammatory pathways,such as in the regulation of neutrophil migration.In conclusion,we have identified a number of differentially expressed genes and differentially expressed mRNAs,miRNA-mRNAs,and signaling pathways involved in the hUMSC treatment of ischemic cerebral infarction.Bioinformatics and interaction analyses can provide novel clues for further research into hUMSC treatment of ischemic cerebral infarction. 展开更多
关键词 nerve REGENERATION ischemic cerebral infarction human umbilical cord mesenchymal STEM CELL TREATMENT bioinformatics analysis DIFFERENTIALLY EXPRESSED genes DIFFERENTIALLY EXPRESSED mRNAs inflammatory response STEM CELL therapy weighted gene co-suppression analysis WGCNA protein-protein interaction network PPI hUMSC neural REGENERATION
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Expansion of the Decoupled Discreet-Time Jacobian Eigenvalue Approximation for Model-Free Analysis of PMU Data
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作者 Sean D. Kantra Elham B. Makram 《Journal of Power and Energy Engineering》 2017年第6期14-35,共22页
This paper proposes an extension of the algorithm in [1], as well as utilization of the wavelet transform in event detection, including High Impedance Fault (HIF). Techniques to analyze the abundant data of PMUs quick... This paper proposes an extension of the algorithm in [1], as well as utilization of the wavelet transform in event detection, including High Impedance Fault (HIF). Techniques to analyze the abundant data of PMUs quickly and effectively are paramount to increasing response time to events and unstable parameters. With the amount of data PMUs output, unstable parameters, tie line oscillations, and HIFs are often overlooked in the bulk of the data. This paper explores model-free techniques to attain stability information and determine events in real-time. When full system connectivity is unknown, many traditional methods requiring other bus measurements can be impossible or computationally extensive to apply. The traditional method of interest is analyzing the power flow Jacobian for singularities and system weak points, attained by applying singular value decomposition. This paper further develops upon the approach in [1] to expand the Discrete-Time Jacobian Eigenvalue Approximation (DDJEA), giving values to significant off-diagonal terms while establishing a generalized connectivity between correlated buses. Statistical linear models are applied over large data sets to prove significance to each term. Then the off diagonal terms are given time-varying weights to account for changes in topology or sensitivity to events using a reduced system model. The results of this novel method are compared to the present errors of the previous publication in order to quantify the degree of improvement that this novel method imposes. The effective bus eigenvalues are briefly compared to Prony analysis to check similarities. An additional application for biorthogonal wavelets is also introduced to detect event types, including the HIF, for PMU data. 展开更多
关键词 SYNCHROPHASOR PMU openPDC Power Flow JACOBIAN Decoupled Discrete-Time JACOBIAN Approximation (DDJEA) SINGULAR value Decomposition (SVD) High Impedance Fault (HIF) Discrete Wavelet Transform (DWT)
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Improving Queuing System Throughput Using Distributed Mean Value Analysis to Control Network Congestion
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作者 Faisal Shahzad Muhammad Faheem Mushtaq +3 位作者 Saleem Ullah M. Abubakar Siddique Shahzada Khurram Najia Saher 《Communications and Network》 2015年第1期21-29,共9页
In this paper, we have used the distributed mean value analysis (DMVA) technique with the help of random observe property (ROP) and palm probabilities to improve the network queuing system throughput. In such networks... In this paper, we have used the distributed mean value analysis (DMVA) technique with the help of random observe property (ROP) and palm probabilities to improve the network queuing system throughput. In such networks, where finding the complete communication path from source to destination, especially when these nodes are not in the same region while sending data between two nodes. So, an algorithm is developed for single and multi-server centers which give more interesting and successful results. The network is designed by a closed queuing network model and we will use mean value analysis to determine the network throughput (b) for its different values. For certain chosen values of parameters involved in this model, we found that the maximum network throughput for &beta;≥0.7?remains consistent in a single server case, while in multi-server case for &beta;≥ 0.5?throughput surpass the Marko chain queuing system. 展开更多
关键词 Network CONGESTION THROUGHPUT QUEUING System DISTRIBUTED Mean value analysis
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Bioinformatics analyses of differentially expressed genes associated with spinal cord injury:a microarray-based analysis in a mouse model 被引量:3
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作者 Lei Guo Jing Lv +2 位作者 Yun-Fei Huang Ding-Jun Hao Ji-Jun Liu 《Neural Regeneration Research》 SCIE CAS CSCD 2019年第7期1262-1270,共9页
Gene spectrum analysis has shown that gene expression and signaling pathways change dramatically after spinal cord injury,which may affect the microenvironment of the damaged site.Microarray analysis provides a new op... Gene spectrum analysis has shown that gene expression and signaling pathways change dramatically after spinal cord injury,which may affect the microenvironment of the damaged site.Microarray analysis provides a new opportunity for investigating diagnosis,treatment,and prognosis of spinal cord injury.However,differentially expressed genes are not consistent among studies,and many key genes and signaling pathways have not yet been accurately studied.GSE5296 was retrieved from the Gene Expression Omnibus DataSet.Differentially expressed genes were obtained using R/Bioconductor software(expression changed at least two-fold;P < 0.05).Database for Annotation,Visualization and Integrated Discovery was used for functional annotation of differentially expressed genes and Animal Transcription Factor Database for predicting potential transcription factors.The resulting transcription regulatory protein interaction network was mapped to screen representative genes and investigate their diagnostic and therapeutic value for disease.In total,this study identified 109 genes that were upregulated and 30 that were downregulated at 0.5,4,and 24 hours,and 3,7,and 28 days after spinal cord injury.The number of downregulated genes was smaller than the number of upregulated genes at each time point.Database for Annotation,Visualization and Integrated Discovery analysis found that many inflammation-related pathways were upregulated in injured spinal cord.Additionally,expression levels of these inflammation-related genes were maintained for at least 28 days.Moreover,399 regulation modes and 77 nodes were shown in the protein-protein interaction network of upregulated differentially expressed genes.Among the 10 upregulated differentially expressed genes with the highest degrees of distribution,six genes were transcription factors.Among these transcription factors,ATF3 showed the greatest change.ATF3 was upregulated within 30 minutes,and its expression levels remained high at28 days after spinal cord injury.These key genes screened by bioinformatics tools can be used as biological markers to diagnose diseases and provide a reference for identifying therapeutic targets. 展开更多
关键词 nerve REGENERATION spinal cord injury differentially expressed GENES BIOINFORMATICS ANALYSES Database for Annotation Visualization and Integrated Discovery analysis inflammation Kyoto Encyclopedia of GENES and Genomes pathway MICROARRAY transcription factors neural REGENERATION
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Diagnostic Value Analysis of Dynamic Contrastenhanced Magnetic Resonance Imaging (DCE-MRI) combined with Diffusion Weighted Imaging (DWI) before Breast Cancer Surgery
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作者 Peng Jing Qiang Zhang 《Proceedings of Anticancer Research》 2018年第6期1-4,共4页
Objective:The objective of this study was to investigate the diagnostic efficacy of pre-operative magnetic resonance imaging(MRI)–dynamic contrast imaging(dynamic contrast-enhanced[DCE]-MRI)combined with diffusion-we... Objective:The objective of this study was to investigate the diagnostic efficacy of pre-operative magnetic resonance imaging(MRI)–dynamic contrast imaging(dynamic contrast-enhanced[DCE]-MRI)combined with diffusion-weighted imaging(DWI)in detecting breast cancer.Research Methodology:A retrospective study was performed to compare the results of DCE-MRI combined with DWI in 78 patients with breast cancer who were treated in our hospital between January 20 and December 2018.Results:After diagnosis,the coincidence rate of diagnosis by DCEMRI combined with DWI was significantly higher than ultrasound(91.0%vs.55.1%,respectively,P<0.05).Among the two diagnostic methods,DCE-MRI combined with DWI imaging showed more obvious tumor signals,and the difference was statistically significant(P<0.05).Conclusion:Pre-operative application of DCE-MRI combined with DWI can provide a more accurate and effective reference for surgical planning. 展开更多
关键词 breast cancer DYNAMIC contrast-enhancedmagnetic resonance IMAGING DIFFUSION-WEIGHTED IMAGING DIAGNOSTIC value
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Mapping theme trends and knowledge structures for human neural stem cells:a quantitative and co-word biclustering analysis for the 2013-2018 period 被引量:5
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作者 Wen-Juan Wei Bei Shi +3 位作者 Xin Guan Jing-Yun Ma Ya-Chen Wang Jing Liu 《Neural Regeneration Research》 SCIE CAS CSCD 2019年第10期1823-1832,共10页
Neural stem cells,which are capable of multi-potential differentiation and self-renewal,have recently been shown to have clinical potential for repairing central nervous system tissue damage.However,the theme trends a... Neural stem cells,which are capable of multi-potential differentiation and self-renewal,have recently been shown to have clinical potential for repairing central nervous system tissue damage.However,the theme trends and knowledge structures for human neural stem cells have not yet been studied bibliometrically.In this study,we retrieved 2742 articles from the PubMed database from 2013 to 2018 using "Neural Stem Cells" as the retrieval word.Co-word analysis was conducted to statistically quantify the characteristics and popular themes of human neural stem cell-related studies.Bibliographic data matrices were generated with the Bibliographic Item Co-Occurrence Matrix Builder.We identified 78 high-frequency Medical Subject Heading(MeSH)terms.A visual matrix was built with the repeated bisection method in gCLUTO software.A social network analysis network was generated with Ucinet 6.0 software and GraphPad Prism 5 software.The analyses demonstrated that in the 6-year period,hot topics were clustered into five categories.As suggested by the constructed strategic diagram,studies related to cytology and physiology were well-developed,whereas those related to neural stem cell applications,tissue engineering,metabolism and cell signaling,and neural stem cell pathology and virology remained immature.Neural stem cell therapy for stroke and Parkinson’s disease,the genetics of microRNAs and brain neoplasms,as well as neuroprotective agents,Zika virus,Notch receptor,neural crest and embryonic stem cells were identified as emerging hot spots.These undeveloped themes and popular topics are potential points of focus for new studies on human neural stem cells. 展开更多
关键词 nerve REGENERATION human NEURAL stem cells PubMed bibliometric analysis biclustering analysis co-word analysis strategic diagram analysis social network analysis hot research topics mapping THEME TRENDS knowledge structures NEURAL REGENERATION
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Is analysis of lower esophageal sphincter vector volumes of value in diagnosing gastroesophageal reflux disease? 被引量:3
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作者 Robert E.Marsh Christopher L.Perdue +4 位作者 Ziad T.Awad Patrice Watson Mohamed Selima Richard E.Davis Charles J.Filipi 《World Journal of Gastroenterology》 SCIE CAS CSCD 2003年第1期174-178,共5页
AIM:With successful surgical treatment of gastroesophageal reflux disease(GERD),there is interest in understanding the anti-reflux barrier and its mechanisms of failure.To date, the potential use of vector volumes to ... AIM:With successful surgical treatment of gastroesophageal reflux disease(GERD),there is interest in understanding the anti-reflux barrier and its mechanisms of failure.To date, the potential use of vector volumes to predict the DeMeester score has not been adequately explored. METHODS:627 patients in the referral database received esophageal manometry and ambulatory 24-hour pH monitoring.Study data included LES resting pressure(LESP), overall LES length(OL)and abdominal length(AL),total vector volume(TVV)and intrabdominal vector volume(IVV). RESULTS:In cases where LESP,TVV or IVV were all below normal,there was an 81.4%probability of a positive DeMeester score.In cases where all three were normal, there was an 86.9%probability that the DeMeester score would be negative.Receiver-operating characteristics(ROC) for LESP,TVV and IVV were nearly identical and indicated no useful cut-off values.Logistic regression demonstrated that LESP and IVV had the strongest association with a positive DeMeester score;however,the regression formula was only 76.1%accurate. CONCLUSION:While the indices based on TVV,IVV and LESP are more sensitive and specific,respectively,than any single measurement,the measurement of vector volumes does not add significantly to the diagnosis of GERD. 展开更多
关键词 ADOLESCENT ADULT Aged Aged 80 and over CHILD Child Preschool Esophagogastric Junction Female Gastroesophageal Reflux Humans Hydrogen-Ion Concentration Male MANOMETRY Middle Aged ROC Curve Regression analysis
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Set-Valued Non-Linear Random Implicit Quasivariational Inclusions
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作者 Salahuddin &emsp Mohammad Kalimuddin Ahmad 《Applied Mathematics》 2013年第3期421-428,共8页
In this paper, we propose iterative algorithms for set valued nonlinear random implicit quasivariational inclusions. We define the related random implicit proximal operator equations and establish an equivalence betwe... In this paper, we propose iterative algorithms for set valued nonlinear random implicit quasivariational inclusions. We define the related random implicit proximal operator equations and establish an equivalence between them. Finally, we prove the existence and convergence of random iterative sequences generated by random iterative algorithms. 展开更多
关键词 Set valued Nonlinear RANDOM IMPLICIT Quasivariational Inclusions RANDOM IMPLICIT Proximal Operator Equations Equivalence Relations RANDOM Iterative Algorithms Measurable SPACES Separable Real Hilbert SPACES RANDOM Strongly MONOTONE RANDOM Relaxed MONOTONE RANDOM Lipschitz Continuous MAPPINGS
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Statistical Methods of SNP Data Analysis and Applications
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作者 Alexander Bulinski Oleg Butkovsky +5 位作者 Victor Sadovnichy Alexey Shashkin Pavel Yaskov Alexander Balatskiy Larisa Samokhodskaya Vsevolod Tkachuk 《Open Journal of Statistics》 2012年第1期73-87,共15页
We develop various statistical methods important for multidimensional genetic data analysis. Theorems justifying application of these methods are established. We concentrate on the multifactor dimensionality reduction... We develop various statistical methods important for multidimensional genetic data analysis. Theorems justifying application of these methods are established. We concentrate on the multifactor dimensionality reduction, logic regression, random forests, stochastic gradient boosting along with their new modifications. We use complementary approaches to study the risk of complex diseases such as cardiovascular ones. The roles of certain combinations of single nucleotide polymorphisms and non-genetic risk factors are examined. To perform the data analysis concerning the coronary heart disease and myocardial infarction the Lomonosov Moscow State University supercomputer “Chebyshev” was employed. 展开更多
关键词 Genetic Data Statistical analysis Multifactor Dimensionality Reduction Ternary Logic Regression Random FORESTS Stochastic Gradient Boosting Independent Rule Single NUCLEOTIDE POLYMORPHISMS CORONARY Heart Disease MYOCARDIAL INFARCTION
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The Analysis of Human Development Index (HDI) for Categorizing the Member States of the United Nations (UN)
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作者 Sivarajah Mylevaganam 《Open Journal of Applied Sciences》 2017年第12期661-690,共30页
To categorize the nations to reflect the development status, to date, there are many conceptual frameworks. The Human Development index (HDI) that is published by the United Nations Development Programme is widely acc... To categorize the nations to reflect the development status, to date, there are many conceptual frameworks. The Human Development index (HDI) that is published by the United Nations Development Programme is widely accepted and practiced by many people such as academicians, politicians, and donor organizations. However, though the development of HDI has gone through many revisions since its formulation in 1990, even the current version of the index formulation published in 2016 needs research to better understand and to gap-fill the knowledge base that can enhance the index formulation to facilitate the direction of attention such as release of funds. Therefore, in this paper, based on principal component analysis and K-means clustering algorithm, the data that reflect the measures of life expectancy index (LEI), education index (EI), and income index (II) are analyzed to categorize and to rank the member states of the UN using R statistical software package, an open source extensible programming language for statistical computing and graphics. The outcome of the study shows that the proportion of total eigen value (i.e., proportion of total variance) explained by PCA-1 (i.e., first principal component) accounts for more than 85% of the total variation. Moreover, the proportion of total eigen value explained by PCA-1 increases with time (i.e., yearly) though the amount of increase with time is not significant. However, the proportions of total eigen value explained by PCA-2 and PCA-3 decrease with time. Therefore, the loss of information in choosing PCA-1 to represent the chosen explanatory variables (i.e., LEI, EI, and II) may diminish with time if the trend of increasing pattern of proportion of total eigen value explained by PCA-1 with time continues in the future as well. On the other hand, the correlation between EI and PCA-1 increases with time although the magnitude of increase is not that significant. This same trend is observed in II as well. However, in contrast to these observations, the correlation between PCA-1 and LEI decreases with time. These findings imply that the contributions of EI and II to PCA-1 increase with time, but the contribution of LEI to PCA-1 decreases with time. On top of these, as per Hopkins statistic, the clusterability of the information conveyed by PCA-1 alone is far better than the clusterability of the information conveyed by PCA scores (i.e., PCA-1, PCA-2, and PCA-3) and the explanatory variables. Therefore, choosing PCA-1 to represent the chosen explanatory variables is becoming more concrete. 展开更多
关键词 Human DEVELOPMENT Index Economy Sustainability UNITED Nations DEVELOPMENT Programme Education Life EXPECTANCY Per Capita INCOME JavaScript R Statistical Software Principal Component analysis K-Means Clustering HOPKINS Statistic
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Design and Analysis of a Power Efficient Linearly Tunable Cross-Coupled Transconductor Having Separate Bias Control
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作者 Vijaya Bhadauria Krishna Kant Swapna Banerjee 《Circuits and Systems》 2012年第1期99-106,共8页
A common current source, generally used to bias cross-coupled differential amplifiers in a transconductor, controls third harmonic distortion (HD3) poorly. Separate current sources are shown to provide better control ... A common current source, generally used to bias cross-coupled differential amplifiers in a transconductor, controls third harmonic distortion (HD3) poorly. Separate current sources are shown to provide better control on HD3) . In this paper, a detailed design and analysis is presented for a transconductor made using this biasing technique. The transconductor, in addition, is made to offer high Gm, low power dissipation and is designed for linearly tunable Gm with current mode load as one of the applications. The circuit exhibits HD3) of less than –43.7 dB, high current efficiency of 1.18 V-1 and Gm of 390 μS at 1 VGp-p @ 50 MHz. UMC 0.18 μm CMOS process technology is used for simulation at supply voltage of 1.8 V. 展开更多
关键词 ANALOG electronics low power ANALOG CMOS Circuit Operational TRANSCONDUCTANCE Amplifier (OTA) Multiple-output OTA (MOTA) MOS TRANSCONDUCTORS LINEARLY TUNABLE Gm Current efficiency Linearization Techniques Harmonic Distortion analysis
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Analysis of the autophagy gene expression profile of pancreatic cancer based on autophagy-related protein microtubule-associated protein 1A/1B-light chain 3 被引量:15
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作者 Yan-Hui Yang Yu-Xiang Zhang +3 位作者 Yang Gui Jiang-Bo Liu Jun-Jun Sun Hua Fan 《World Journal of Gastroenterology》 SCIE CAS 2019年第17期2086-2098,共13页
BACKGROUND Pancreatic cancer is a highly invasive malignant tumor. Expression levels of the autophagy-related protein microtubule-associated protein 1 A/1 B-light chain 3(LC3) and perineural invasion(PNI) are closely ... BACKGROUND Pancreatic cancer is a highly invasive malignant tumor. Expression levels of the autophagy-related protein microtubule-associated protein 1 A/1 B-light chain 3(LC3) and perineural invasion(PNI) are closely related to its occurrence and development. Our previous results showed that the high expression of LC3 was positively correlated with PNI in the patients with pancreatic cancer. In this study, we further searched for differential genes involved in autophagy of pancreatic cancer by gene expression profiling and analyzed their biological functions in pancreatic cancer, which provides a theoretical basis for elucidating the pathophysiological mechanism of autophagy in pancreatic cancer and PNI.AIM To identify differentially expressed genes involved in pancreatic cancer autophagy and explore the pathogenesis at the molecular level.METHODS Two sets of gene expression profiles of pancreatic cancer/normal tissue(GSE16515 and GSE15471) were collected from the Gene Expression Omnibus.Significance analysis of microarrays algorithm was used to screen differentially expressed genes related to pancreatic cancer. Gene Ontology(GO) analysis and Kyoto Encyclopedia of Genes and Genomes(KEGG) pathway analysis were used to analyze the functional enrichment of the differentially expressed genes. Protein interaction data containing only differentially expressed genes was downloaded from String database and screened. Module mining was carried out by Cytoscape software and ClusterOne plug-in. The interaction relationship between the modules was analyzed and the pivot nodes between the functional modules were determined according to the information of the functional modules and the data of reliable protein interaction network.RESULTS Based on the above two data sets of pancreatic tissue total gene expression, 6098 and 12928 differentially expressed genes were obtained by analysis of genes with higher phenotypic correlation. After extracting the intersection of the two differential gene sets, 4870 genes were determined. GO analysis showed that 14 significant functional items including negative regulation of protein ubiquitination were closely related to autophagy. A total of 986 differentially expressed genes were enriched in these functional items. After eliminating the autophagy related genes of human cancer cells which had been defined, 347 differentially expressed genes were obtained. KEGG pathway analysis showed that the pathways hsa04144 and hsa04020 were related to autophagy. In addition,65 clustering modules were screened after the protein interaction network was constructed based on String database, and module 32 contains the LC3 gene,which interacts with multiple autophagy-related genes. Moreover, ubiquitin C acts as a pivot node in functional modules to connect multiple modules related to pancreatic cancer and autophagy.CONCLUSION Three hundred and forty-seven genes associated with autophagy in human pancreatic cancer were concentrated, and a key gene ubiquitin C which is closely related to the occurrence of PNI was determined, suggesting that LC3 may influence the PNI and prognosis of pancreatic cancer through ubiquitin C. 展开更多
关键词 Pancreatic cancer Autophagy-related PROTEIN microtubule-associated PROTEIN 1A/1B-light chain 3 Perineural invasion Gene Ontology analysis Kyoto ENCYCLOPEDIA of Genes and Genomes pathway analysis Ubiquitin C
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Differential Diagnostic Value of Texture Feature Analysis of Magnetic Resonance T2 Weighted Imaging between Glioblastoma and Primary Central Neural System Lymphoma 被引量:5
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作者 王波涛 刘明霞 陈志晔 《Chinese Medical Sciences Journal》 CAS CSCD 2019年第1期10-17,共8页
Objective To investigate the difference in tumor conventional imaging findings and texture features on T2 weighted images between glioblastoma and primary central neural system(CNS) lymphoma. Methods The pre-operative... Objective To investigate the difference in tumor conventional imaging findings and texture features on T2 weighted images between glioblastoma and primary central neural system(CNS) lymphoma. Methods The pre-operative MRI data of 81 patients with glioblastoma and 28 patients with primary CNS lymphoma admitted to the Chinese PLA General Hospital and Hainan Hospital of Chinese PLA General Hospital were retrospectively collected. All patients underwent plain MR imaging and enhanced T1 weighted imaging to visualize imaging features of lesions. Texture analysis of T2 weighted imaging(T2 WI) was performed by use of GLCM texture plugin of ImageJ software, and the texture parameters including Angular Second Moment(ASM), Contrast, Correlation, Inverse Difference Moment(IDM), and Entropy were measured. Independent sample t-test and Mann-Whitney U test were performed for the between-group comparisons, regression model was established by Binary Logistic regression analysis, and receiver operating characteristic(ROC) curve was plotted to compare the diagnostic efficacy. Results The conventional imaging features including cystic and necrosis changes(P = 0.000), ‘Rosette' changes(P = 0.000) and ‘incision sign'(P = 0.000), except ‘flame-like edema'(P = 0.635), presented significantly statistical difference between glioblastoma and primary CNS lymphoma. The texture features, ASM, Contrast, Correlation, IDM and Entropy, showed significant differences between glioblastoma and primary CNS lympoma(P = 0.006,0.000, 0.002, 0.000, and 0.015 respectively). The area under the ROC curve was 0.671, 0.752, 0.695, 0.720 and 0.646 respectively, and the area under the ROC curve was 0.917 for the combined texture variables(Contrast, cystic and necrosis, ‘Rosette' changes, and ‘incision sign') in the model of Logistic regression. Binary Logistic regression analysis demonstrated that cystic and necrosis changes, ‘Rosette' changes and ‘incision sign' and texture Contrast could be considered as the specific texture variables for the differential diagnosis of glioblastoma and primary CNS lymphoma. Conclusion The texture features of T2 WI and conventional imaging findings may be used to distinguish glioblastoma from primary CNS lymphoma. 展开更多
关键词 GLIOBLASTOMA primary CENTRAL NEURAL system LYMPHOMA texture analysis T2 WEIGHTED imaging differential diagnosis
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Frequency Dependence of the <i>b</i>-Value Used for Acoustic Emission Analysis of Glass Fiber Reinforced Plastics
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作者 Do Yun Jung Yoshihiro Mizutani +1 位作者 Akira Todoroki Yoshiro Suzuki 《Open Journal of Composite Materials》 2017年第3期117-129,共13页
Acoustic Emission Testing (AT) is one of the major non-destructive testing methods used for severity evaluation of structures. Amplitude distributions of AE signals are characterized by b-value and the value is mainly... Acoustic Emission Testing (AT) is one of the major non-destructive testing methods used for severity evaluation of structures. Amplitude distributions of AE signals are characterized by b-value and the value is mainly used for the severity evaluation of concrete structures until now. The value is assumed to be independent with propagation distance between acoustic emission sources to AE sensors. We evaluate the influence of the wide frequency band encountered in the fracture behavior of glass fiber reinforced plastic (GFRP) on the b-value analysis. In tensile tests, the b-value was determined from an acoustic emission (AE) source generated near a centered hole in a specimen of GFRP. At 15 mm from the hole, the b-value analysis indicated a decreasing trend with increasing tensile stress. At a propagation length of 45 mm, farthest from the hole, a?small number of AE signals were received. The attenuation is more rapid for high-frequency AE signals. Thus, the amplitude distribution bandwidth is wide and the b-value changes. This change in b-value for GFRPs is investigated by analyzing the spectral components of the AE signals. For a single-frequency AE source, the b-value is unchanged with propagation length. In contrast, multiple-frequency AE sources produce changes in b-value proportional to the fraction of each spectral component in the received signal. This is due to the frequency dependence of the attenuation with propagation length.?From these results, the b-value analysis cannot be applied to considering frequency dependence of AE attenuation. 展开更多
关键词 Structure Health Monitoring B-value analysis Acoustic Emission Testing Fi-ber Reinforced Plastics Frequency Dependence of ATTENUATION
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Structure Sorting of Multiple Macromolecular States in Heterogeneous Cryo-EM Samples by 3D Multivariate Statistical Analysis
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作者 Bruno P. Klaholz 《Open Journal of Statistics》 2015年第7期820-836,共17页
Heterogeneity of biological samples is usually considered a major obstacle for three-dimensional (3D) structure determination of macromolecular complexes. Heterogeneity may occur at the level of composition or conform... Heterogeneity of biological samples is usually considered a major obstacle for three-dimensional (3D) structure determination of macromolecular complexes. Heterogeneity may occur at the level of composition or conformational variability of complexes and affects most 3D structure determination methods that rely on signal averaging. Here, an approach is described that allows sorting structural states based on a 3D statistical approach, the 3D sampling and classification (3D-SC) of 3D structures derived from single particles imaged by cryo electron microscopy (cryo-EM). The method is based on jackknifing & bootstrapping of 3D sub-ensembles and 3D multivariate statistical analysis followed by 3D classification. The robustness of the statistical sorting procedure is corroborated using model data from an RNA polymerase structure and experimental data from a ribosome complex. It allows resolving multiple states within heterogeneous complexes that thus become amendable for a structural analysis despite of their highly flexible nature. The method has important implications for high-resolution structural studies and allows describing structure ensembles to provide insights into the dynamics of multi-component macromolecular assemblies. 展开更多
关键词 Heterogeneity Structural Biology Cryo Electron Microscopy Particle SORTING MULTIPLE States Macromolecular Complexes RESAMPLING Jackknifing BOOTSTRAPPING Multivariate Statistical analysis 3D MSA 3D-SC RIBOSOME RNA Polymerase
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Value of Texture Analysis of Intravoxel Incoherent Motion Parameters in Differential Diagnosis of Pancreatic Neuroendocrine Tumor and Pancreatic Adenocarcinoma 被引量:8
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作者 王英伟 张兴华 +5 位作者 王波涛 王叶 刘梦琦 王海屹 叶慧义 陈志晔 《Chinese Medical Sciences Journal》 CAS CSCD 2019年第1期1-9,共9页
Objective To evaluate the value of texture features derived from intravoxel incoherent motion(IVIM) parameters for differentiating pancreatic neuroendocrine tumor(pNET) from pancreatic adenocarcinoma(PAC).Methods Eigh... Objective To evaluate the value of texture features derived from intravoxel incoherent motion(IVIM) parameters for differentiating pancreatic neuroendocrine tumor(pNET) from pancreatic adenocarcinoma(PAC).Methods Eighteen patients with pNET and 32 patients with PAC were retrospectively enrolled in this study. All patients underwent diffusion-weighted imaging with 10 b values used(from 0 to 800 s/mm2). Based on IVIM model, perfusion-related parameters including perfusion fraction(f), fast component of diffusion(Dfast) and true diffusion parameter slow component of diffusion(Dslow) were calculated on a voxel-by-voxel basis and reorganized into gray-encoded parametric maps. The mean value of each IVIM parameter and texture features [Angular Second Moment(ASM), Inverse Difference Moment(IDM), Correlation, Contrast and Entropy] values of IVIM parameters were measured. Independent sample t-test or Mann-Whitney U test were performed for the betweengroup comparison of quantitative data. Regression model was established by using binary logistic regression analysis, and receiver operating characteristic(ROC) curve was plotted to evaluate the diagnostic efficiency.Results The mean f value of the pNET group were significantly higher than that of the PAC group(27.0% vs. 19.0%, P = 0.001), while the mean values of Dfast and Dslow showed no significant differences between the two groups. All texture features(ASM, IDM, Correlation, Contrast and Entropy) of each IVIM parameter showed significant differences between the pNET and PAC groups(P = 0.000-0.043). Binary logistic regression analysis showed that texture ASM of Dfast and texture Correlation of Dslow were considered as the specific imaging variables for the differential diagnosis of pNET and PAC. ROC analysis revealed that multiple texture features presented better diagnostic performance than IVIM parameters(AUC 0.849-0.899 vs. 0.526-0.776), and texture ASM of Dfast combined with Correlation of Dslow in the model of logistic regression had largest area under ROC curve for distinguishing pNET from PAC(AUC 0.934, cutoff 0.378, sensitivity 0.889, specificity 0.854). Conclusion Texture analysis of IVIM parameters could be an effective and noninvasive tool to differentiate pNET from PAC. 展开更多
关键词 NEUROENDOCRINE TUMOR PANCREATIC ADENOCARCINOMA texture analysis intravoxel INCOHERENT motion differential diagnosis
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A retrospective view on the history of natural sciences in XX-XXI
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作者 Vladislav Sergeyevich Olkhovsky 《Natural Science》 2010年第3期228-245,共18页
The presented paper is dedicated to a new ret-rospective view on the history of natural sci-ences in XX-XXI cc, partially including the sci-ence philosophy (mainly, the problems of the scientific realism, i.e. the cor... The presented paper is dedicated to a new ret-rospective view on the history of natural sci-ences in XX-XXI cc, partially including the sci-ence philosophy (mainly, the problems of the scientific realism, i.e. the correspondence of science to reality) and also a novel scheme for different classes of sciences with different ob-jects and paradigms. There are analyzed the chosen “great” and “grand” problems of phys-ics (including the comprehension of quantum mechanics, with a recently elaborated new chapter, connected with time as a quantum obs- ervable and time analysis of quantum processes) and also of natural sciences as a whole. The particular attention is paid to the interpretation questions and slightly to the aspects, inevitably connected with the world- views of the res- earchers (which do often constitute a part of the interpretation questions). 展开更多
关键词 SCIENCE history SCIENCE realism paradigm PROBLEM of interpretation and comprehension of QUANTUM mechanics the WAVE-FUNCTION collapse the Einstein-Podolsky-Rosen paradox TIME as a QUANTUM observable canonically conjugated to energy maximal hermitian TIME operator TIME analysis of QUANTUM processes relationship be-tween physics and biology PROBLEM of origin of biologic life REDUCTIONISM cosmologic PROBLEM Big Bang anthropic principle
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Finite Element Analysis of the Ramberg-Osgood Bar
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作者 Dongming Wei Mohamed B. M. Elgindi 《American Journal of Computational Mathematics》 2013年第3期211-216,共6页
In this work, we present a priori error estimates of finite element approximations of the solution for the equilibrium equation of an axially loaded Ramberg-Osgood bar. The existence and uniqueness of the solution to ... In this work, we present a priori error estimates of finite element approximations of the solution for the equilibrium equation of an axially loaded Ramberg-Osgood bar. The existence and uniqueness of the solution to the associated nonlinear two point boundary value problem is established and used as a foundation for the finite element analysis. 展开更多
关键词 Nonlinear Two Point Boundary value Problem Ramberg-Osgood AXIAL BAR EXISTENCE and UNIQUENESS of Solutions Finite Element analysis CONVERGENCE and a Priori Error ESTIMATES
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