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抗生素中L-玫红糖的生物合成基因簇结构与其合成途径
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作者 范凡 乔建军 《生命的化学》 CAS CSCD 北大核心 2007年第1期39-42,共4页
抗生素的生物合成过程中普遍存在被脱氧糖糖基化的现象。糖基的存在可以增加抗生素的溶解度和稳定性,提高抗生素的生物活性。L-玫红糖是6-脱氧己糖家族中的一种三脱氧葡萄糖。目前已有5种含有玫红糖及其衍生物的抗生素完成了糖基生物合... 抗生素的生物合成过程中普遍存在被脱氧糖糖基化的现象。糖基的存在可以增加抗生素的溶解度和稳定性,提高抗生素的生物活性。L-玫红糖是6-脱氧己糖家族中的一种三脱氧葡萄糖。目前已有5种含有玫红糖及其衍生物的抗生素完成了糖基生物合成基因簇克隆及测序。研究结果表明L-玫红糖的生物合成基因簇有了一定的分化,但在基因结构上仍有较大的保守性。L-玫红糖的生物合成主要包括形成dNDP-葡萄糖、脱水、脱氧、酮基还原和异构等反应,其衍生物的合成还包括甲基化、酰基化等;这被人们普遍认可,但在一些细节上,如是否形成中间体dNDP-3,4-二酮-2,6-双脱氧-D-葡萄糖,以及糖基的异构何时发生等问题还存在分歧,仍需进一步研究。 展开更多
关键词 L-玫红糖 三脱氧糖 生物合成基因簇 生物合成途径 抗生素
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Design and choice of TFO binding and cleaving HBV core promoter
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作者 光丽霞 袁发焕 +2 位作者 任平 奚敏 艾友平 《Journal of Medical Colleges of PLA(China)》 CAS 2003年第1期36-41,共6页
Objective: To screen a triple helix-forming oligodeoxyribonucleotide (TFO) that can bind HBV core promoter at target site with high affinity and specificity, and to observe the ability of manganese porphyrin modified ... Objective: To screen a triple helix-forming oligodeoxyribonucleotide (TFO) that can bind HBV core promoter at target site with high affinity and specificity, and to observe the ability of manganese porphyrin modified TFO to combine and cleave HBV DNA. Methods: Similar homopurine domain (1 734 - 1 754) in HBV core promoter was selected as target sequence. Several corresponding TFOs were synthesized. The affinities and specificities of TFOs binding target sequence were tested with electrophoretic mobility shift and DNase I footprinting assays. The selected best TFO was modified with manganese porphyrin and acridine. The ability of the TFO derivative to cleave HBV DNA was observed with cleavage experiment. Results: Under the condition of 371 and pH 7. 4, the TFO consisting of cytidylate and thymidylate (CT-TFO) and the parallel TFO consisting of guanylate and thymidylate (GT-TFOp) bound the target sequence weakly with Kd values much more than 10 -6 mol/L. The affinities of anti-parallel GT-TFO ( GT-TFOap) and short TFO consisting of adenine nucleotide and guanylate (AG-TFOsh) binding the target sequence were higher than those of the formers, with Kd values of 5 μ 10-7 mol/L and 2. 5 μ 10-8 mol/L respectively. Long AG-TFO (AG-TF01) had the highest binding affinity with a Kd value of 3 μ 10 -9 mol/L among all the TFOs studied for sequence specificity. In the presence of potassium monopersulfate, KHSO5, TFO modified with manganese porphyrin and acridine cleaved the target sequence where the triplex DNA formed. Conclusion: TFO containing AG or GT binds homopurine in HBV core promoter in adverse parallel direction to form triple helix. AG-TFO1 has the highest binding affinity among all the TFOs studied. After modified with manganese porphyrin, AG-TFO1 completely binds and cleaves the target HBV DNA sequence where triplex DNA is formed. 展开更多
关键词 triple helix-forming oligodeoxyribonucleotides hepatitis B virus triplex DNA
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