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用逐步回归鉴别上位性QTL互作标记的模拟研究(英文) 被引量:4
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作者 王道龙 朱军 黎志康 《浙江大学学报(农业与生命科学版)》 CAS CSCD 北大核心 1999年第5期453-461,共9页
利用蒙特卡罗模拟对逐步回归分析在鉴别代表QTL 上位性的互作遗传标记上的应用进行了详细研究⒚结果表明,逐步回归分析能够有效、准确地鉴别出反映QTL上位性的互作遗传标记,并优于当前常用的双向方差分析⒚QTL之间的紧密连... 利用蒙特卡罗模拟对逐步回归分析在鉴别代表QTL 上位性的互作遗传标记上的应用进行了详细研究⒚结果表明,逐步回归分析能够有效、准确地鉴别出反映QTL上位性的互作遗传标记,并优于当前常用的双向方差分析⒚QTL之间的紧密连锁会导致互作标记鉴别的分辨率降低,并使鉴别的效率出现扭曲⒚大样本和/或高遗传率可以从总体上提高互作标记准确鉴别的效率,而特定的互作标记鉴别的效率在很大程度上取决于它所代表的QTL上位性的相对贡献率⒚显著水平也是影响互作标记鉴别效率的一个重要因子⒚本文建议在几种不同的显著水平下进行若干次逐步回归分析。 展开更多
关键词 蒙特卡罗模拟 互作标记 QTL上位性 遗传标记
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A novel long non-coding RNA Myolinc regulates myogenesis through TDP-43 and Filip1 被引量:8
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作者 Giuseppe Militello Mohammed Rabiul Hosen +13 位作者 Yuliya Ponomareva Pascal Gellerts Tyler Weirick David John Sajedah Mahmoud Hindi Kamel Mamchaoui Vincent Mouly Claudia Doring Lidan Zhang Miki Nakamura Ashok Kumar So-ichiro Fukada Stefanie Dimmeler Shizuka Uchida 《Journal of Molecular Cell Biology》 SCIE CAS CSCD 2018年第2期102-117,共16页
Myogenesis is a complex process required for skeletal muscle formation during embryonic development and for regeneration and growth of myofibers in adults. Accumulating evidence suggests that long non-coding RNAs (In... Myogenesis is a complex process required for skeletal muscle formation during embryonic development and for regeneration and growth of myofibers in adults. Accumulating evidence suggests that long non-coding RNAs (IncRNAs) play key roles in regulating cell fate decision and function in various tissues. However, the role of IncRNAs in the regulation of myogenesis remains poorly understood. In this study, we identifed a novel muscle-enriched IncRNA called 'Myolinc (AK142388)', which we functionally characterized in the C2C12 myoblast cell line. Myolinc is predominately localized in the nucleus, and its levels increase upon induction of the differ-entiation. Knockdown of Myolinc impairs the expression of myogenic regulatory factors and formation of multi-nucleated myotubes in cultured myoblasts. Myolinc also regulates the expression of Filipl in a cis-manner. Similar to MyoUnc, knockdown of FiUpl inhi-bits myogenic differentiation. Furthermore, Myolinc binds to TAR DNA-binding protein 43 (TDP-43), a DNA/RNA-binding protein that regulates the expression of muscle genes (e.g. Actal and MyoD). Knockdown of TDP-43 inhibits myogenic differentiation. We also show that Myolinc-TDP-43 interaction is essential for the binding of TDP-43 to the promoter regions of muscle marker genes. Finally, we show that silencing of Myolinc inhibits skeletal muscle regeneration in adult mice. Altogether, our study identifies a novel IncRNA that controls key regulatory networks of myogenesis. 展开更多
关键词 long non-coding RNA skeletal muscle myoblasts differentiation transcriptional regulation
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Label-free high-throughput and real-time detections of protein interactions by oblique-incidence reflectivity difference method 被引量:1
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作者 HE LiPing LIU Shuang +5 位作者 DAI JunBeijing National Laboratory for Condensed Matter Physics Institute of Physics Chinese Academy of Sciences Lü HuiBin JIN KuiJuan YANG GuoZhen 《Science China(Physics,Mechanics & Astronomy)》 SCIE EI CAS 2014年第4期615-618,共4页
Selected Mouse IgG of 1 mg/mL as target was fabricated on microarray for 500 sample dots.Label-free and real-time reaction dynamic processes were detected between the microarrays with Goat Anti-mouse IgG of 0.02 mg/mL... Selected Mouse IgG of 1 mg/mL as target was fabricated on microarray for 500 sample dots.Label-free and real-time reaction dynamic processes were detected between the microarrays with Goat Anti-mouse IgG of 0.02 mg/mL using the obliqueincidence reflectivity difference(OIRD)method.We obtained the reaction results and the reaction dynamic curves of 500 protein dots.In addition,we also used label-free detection of protein microarrays of 10080 sample dots,including BSA and different concentrations of Mouse IgG and Rabbit IgG,by OIRD.The obtained reaction results between the protein microarray with 1 mg/mL Goat Anti-mouse IgG and 1 mg/mL Goat Anti-rabbit IgG are reported herein.Experimental results show that OIRD can be not only label-free high-throughput detection method for biological microarrays but also label-free real-time detection in the interaction processes of biomolecules. 展开更多
关键词 oblique-incidence reflectivity difference(OIRD) LABEL-FREE REAL-TIME HIGH-THROUGHPUT
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Label-free and real-time detection of antigen-antibody interactions by Oblique-incidence Reflectivity Difference(OIRD) method 被引量:4
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作者 HE LiPing SUN Yue +6 位作者 DAI Jun WANG JingYi LU HuiBin WANG ShuFang JIN KuiJuan ZHOU YueLiang YANG GuoZhen 《Science China(Physics,Mechanics & Astronomy)》 SCIE EI CAS 2012年第9期1585-1588,共4页
We label-free and real-time detected three interaction processes of antigen-antibodies,Human Immunoglobulin G(IgG),Rabbit IgG,and Mouse IgG as the targets,and Goat Anti-human IgG,Goat Anti-rabbit IgG,and Goat Anti-mou... We label-free and real-time detected three interaction processes of antigen-antibodies,Human Immunoglobulin G(IgG),Rabbit IgG,and Mouse IgG as the targets,and Goat Anti-human IgG,Goat Anti-rabbit IgG,and Goat Anti-mouse IgG as the probe,by the Oblique-incidence Reflectivity Difference(OIRD) method.The interaction dynamic curves of the OIRD signal,corresponding to the interaction processes of antigen-antibodies,are generated.The reaction times from beginning to equilibrium state are about 1800,900,and 1200 s for Human IgG,Rabbit IgG,and Mouse IgG,respectively.The experimental results demonstrate that the OIRD method not only can distinguish biomolecular interactions,but also can be used in real-time detection of interactions and dynamic processes of biomolecules. 展开更多
关键词 Oblique-incidence Reflectivity Difference (OIRD) label-free and real-time detection dynamic process of biomolecularinteraction
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