Genetic comparison between Rhynchophorus ferrugineus （Coleoptera： Curculionidae： Rhynchophorinae） and other four Rhynchophorus spp. such as R. bilineatus, R. phoenicis, R. cruentatus and R. palmarum was investigat...Genetic comparison between Rhynchophorus ferrugineus （Coleoptera： Curculionidae： Rhynchophorinae） and other four Rhynchophorus spp. such as R. bilineatus, R. phoenicis, R. cruentatus and R. palmarum was investigated using partial sequences of Cytochrome c oxidase subunit I （COl） mitochondrial gene. The number ofpolymorphic sites ranged from 79 to 102 while the genetic distances ranged from 0.058 to 0.095. The number of polymorphic sites, genetic distances and phylogenetic relationships among R. ferrugineus and the other four tested species revealed that R.ferrugineus was more closely related to R. bilineatus while it was distantly related to R. palmarum. It is possible to rank the five tested species as follows： R.ferrugineus, R. bilineatus, R. phoenicis, R. cruentatus and R. palmarum. The result of this study is the first step of the revision of the uncertain taxonomic status and phylogenetic relationships among the Rhynchophorus genus. Further analysis should be performed using other Rhynchophorus species as well as other molecular markers.展开更多
The lesser Egyptian jerboa Jaculus jaculus, is a member of the subfamily Dipodinae, known to have a number of subspecies. Previous studies of J. jaculus from North Africa found various morphological forms of unknown t...The lesser Egyptian jerboa Jaculus jaculus, is a member of the subfamily Dipodinae, known to have a number of subspecies. Previous studies of J. jaculus from North Africa found various morphological forms of unknown taxonomic status, which are frequently grouped into two taxa： J. jaculus and J. deserti. We assessed the taxonomic status of this taxon in Tunisia using allozymic （phylogenetic analysis of 23 genetic loci encoding 16 enzymatic proteins） and morphological （multivariate analysis of 13 craniodental characters） analyses of 136 J. jaculus specimens collected from seven localities within its distribution range. Allozymic analysis clearly indicated the existence of two distinct groups of J. jaculus, with a mean genetic distance （D） value of 0.99 and FΩ=0.52. Individuals within the two groups did not show any obvious geographical structuration, even within the Matmata locality which represents the meeting point for the two groups where they were found in sympatry. Additionally, morphometric analysis of 13 craniodental characters was clearly separated the two groups. These results were obtained over a very restricted area of the total distribution of J. jaculus and strongly suggest the occurrence of two separate and often sympatric species within the currently accepted J.jaculus in Tunisia： J.jaculus and J. deserti展开更多
Because of its importance as a food source, Nemipterus japonicus （Bloch, 1791） （Nemipteridae） or Japanese threadfin bream is the best studied of these taxa, and numerous investigations have examined its fisheries,...Because of its importance as a food source, Nemipterus japonicus （Bloch, 1791） （Nemipteridae） or Japanese threadfin bream is the best studied of these taxa, and numerous investigations have examined its fisheries, its biology and biochemistry. De- spite such intensive work, the taxonomic status of N. japonicus has never been seriously questioned and it is regarded as a common species, widely distributed throughout the Indo-Westem Pacific Ocean. In fact, Bloch＇s description of the type specimen of N.ja- ponicus has ambiguous collection data and lacks a designation for the type locality, though it is probably Java. In this paper, DNA barcode results based on COl gene support the existence of two geographically separated lineages of the Japanese threadfin bream, both being an Indian Ocean and western Pacific lineage, with 2.7% sequence divergence, and the results indicate a possible existing of some cryptic species. The two lineages also possess a diagnostic difference in their belly color, with specimens in the South China Sea having a silver belly, while those from the Indian Ocean isolate specimen have a yellow coloration. Based upon new collections from the South China Sea, this species from the western Pacific is morphologically redescribed and its details of DNA barcode diver- sity are shown for the future investigations.展开更多
The taxonomic status of the medicinal plants in Jordan is expressed in terms of its diversity, the documentation of the scientific research that is carried out locally over the last many years; to test for the potenti...The taxonomic status of the medicinal plants in Jordan is expressed in terms of its diversity, the documentation of the scientific research that is carried out locally over the last many years; to test for the potential of some medicinal plant species （MPS） in Jordan on different biological aspects is also prepared. This has been reported here by revising and documenting the available literature to the author on this subject. The ecological status of medicinal plants in Jordar is also pointed out. The aim of this research was mainly to evaluate the status of the research on medicinal plants that was carried oul： to test for the different biological potentials of medicinal plants in Jordan and to emphasis the richness of the country of its wild medicinal plants, which are of promising value in whether for use in traditional medicine or in pharmaceutical industry, and certainly need lots of investigations and scientific research. Photographs of some medicinal plants that are common in Jordan and are used in traditional medicine in the urban areas and the Badia region, which is located in the Eastern part of the country and characterized by its dry weather conditions and least amount of rainfall in the country, are also included; the plant photographs are selected from different representative families of the common flowering plants in Jordan.展开更多
Ecological niche modeling has emerged as an useful tool in the investigation of the phylogeographic histories of species or communities in a region. The high biodiversity （oftentimes cryptic）, and complex geography ...Ecological niche modeling has emerged as an useful tool in the investigation of the phylogeographic histories of species or communities in a region. The high biodiversity （oftentimes cryptic）, and complex geography and geological history of Southeast Asia particularly call for multipronged approaches in phylogeographic investigations. Past studies have focused on taxa that are associated with lowland rainforests, which is the dominant natural vegetation type. Here, we combine published phylogenetic data, ecological niche modeling and paleo-climate models to reveal potential drivers of divergence in two open-forest bird species, the oriental magpie-robin Copsychus saularis and Coppersmith barbet Megalaima haemacephala. In spite of broad overlap in current distributions, there are subtle differences in their climatic niches, which result in different responses to past climatic changes. For C saularis, both Last Glacial Maximum climate models indicated that the entire Sundaland was climati- cally suitable, while phylogenetic analyses found divergent eastern and western Sundaland lineages. We thus postulate that this genetic divergence was a result of past separations of coastal habitats into eastern and western portions due to the emergence of Sunda shelf as sea-level fell. The current separation of morphological subspecies in Borneo is maintained by low climatic suitability （high annual rainfall） in certain regions. The extirpation of M. haemacephala from Borneo and southern Malay Peninsula might have been driven by unsuitable conditions （high temperature seasonality） in central Sundaland and/or the lack of open woodlands. Our study shows that ecological niche modeling adds a powerful dimension to our attempt to understand lineage evolution in space [Current Zoology 61 （5）： 922-934, 2015].展开更多
文摘Genetic comparison between Rhynchophorus ferrugineus （Coleoptera： Curculionidae： Rhynchophorinae） and other four Rhynchophorus spp. such as R. bilineatus, R. phoenicis, R. cruentatus and R. palmarum was investigated using partial sequences of Cytochrome c oxidase subunit I （COl） mitochondrial gene. The number ofpolymorphic sites ranged from 79 to 102 while the genetic distances ranged from 0.058 to 0.095. The number of polymorphic sites, genetic distances and phylogenetic relationships among R. ferrugineus and the other four tested species revealed that R.ferrugineus was more closely related to R. bilineatus while it was distantly related to R. palmarum. It is possible to rank the five tested species as follows： R.ferrugineus, R. bilineatus, R. phoenicis, R. cruentatus and R. palmarum. The result of this study is the first step of the revision of the uncertain taxonomic status and phylogenetic relationships among the Rhynchophorus genus. Further analysis should be performed using other Rhynchophorus species as well as other molecular markers.
文摘The lesser Egyptian jerboa Jaculus jaculus, is a member of the subfamily Dipodinae, known to have a number of subspecies. Previous studies of J. jaculus from North Africa found various morphological forms of unknown taxonomic status, which are frequently grouped into two taxa： J. jaculus and J. deserti. We assessed the taxonomic status of this taxon in Tunisia using allozymic （phylogenetic analysis of 23 genetic loci encoding 16 enzymatic proteins） and morphological （multivariate analysis of 13 craniodental characters） analyses of 136 J. jaculus specimens collected from seven localities within its distribution range. Allozymic analysis clearly indicated the existence of two distinct groups of J. jaculus, with a mean genetic distance （D） value of 0.99 and FΩ=0.52. Individuals within the two groups did not show any obvious geographical structuration, even within the Matmata locality which represents the meeting point for the two groups where they were found in sympatry. Additionally, morphometric analysis of 13 craniodental characters was clearly separated the two groups. These results were obtained over a very restricted area of the total distribution of J. jaculus and strongly suggest the occurrence of two separate and often sympatric species within the currently accepted J.jaculus in Tunisia： J.jaculus and J. deserti
文摘Because of its importance as a food source, Nemipterus japonicus （Bloch, 1791） （Nemipteridae） or Japanese threadfin bream is the best studied of these taxa, and numerous investigations have examined its fisheries, its biology and biochemistry. De- spite such intensive work, the taxonomic status of N. japonicus has never been seriously questioned and it is regarded as a common species, widely distributed throughout the Indo-Westem Pacific Ocean. In fact, Bloch＇s description of the type specimen of N.ja- ponicus has ambiguous collection data and lacks a designation for the type locality, though it is probably Java. In this paper, DNA barcode results based on COl gene support the existence of two geographically separated lineages of the Japanese threadfin bream, both being an Indian Ocean and western Pacific lineage, with 2.7% sequence divergence, and the results indicate a possible existing of some cryptic species. The two lineages also possess a diagnostic difference in their belly color, with specimens in the South China Sea having a silver belly, while those from the Indian Ocean isolate specimen have a yellow coloration. Based upon new collections from the South China Sea, this species from the western Pacific is morphologically redescribed and its details of DNA barcode diver- sity are shown for the future investigations.
文摘The taxonomic status of the medicinal plants in Jordan is expressed in terms of its diversity, the documentation of the scientific research that is carried out locally over the last many years; to test for the potential of some medicinal plant species （MPS） in Jordan on different biological aspects is also prepared. This has been reported here by revising and documenting the available literature to the author on this subject. The ecological status of medicinal plants in Jordar is also pointed out. The aim of this research was mainly to evaluate the status of the research on medicinal plants that was carried oul： to test for the different biological potentials of medicinal plants in Jordan and to emphasis the richness of the country of its wild medicinal plants, which are of promising value in whether for use in traditional medicine or in pharmaceutical industry, and certainly need lots of investigations and scientific research. Photographs of some medicinal plants that are common in Jordan and are used in traditional medicine in the urban areas and the Badia region, which is located in the Eastern part of the country and characterized by its dry weather conditions and least amount of rainfall in the country, are also included; the plant photographs are selected from different representative families of the common flowering plants in Jordan.
文摘Ecological niche modeling has emerged as an useful tool in the investigation of the phylogeographic histories of species or communities in a region. The high biodiversity （oftentimes cryptic）, and complex geography and geological history of Southeast Asia particularly call for multipronged approaches in phylogeographic investigations. Past studies have focused on taxa that are associated with lowland rainforests, which is the dominant natural vegetation type. Here, we combine published phylogenetic data, ecological niche modeling and paleo-climate models to reveal potential drivers of divergence in two open-forest bird species, the oriental magpie-robin Copsychus saularis and Coppersmith barbet Megalaima haemacephala. In spite of broad overlap in current distributions, there are subtle differences in their climatic niches, which result in different responses to past climatic changes. For C saularis, both Last Glacial Maximum climate models indicated that the entire Sundaland was climati- cally suitable, while phylogenetic analyses found divergent eastern and western Sundaland lineages. We thus postulate that this genetic divergence was a result of past separations of coastal habitats into eastern and western portions due to the emergence of Sunda shelf as sea-level fell. The current separation of morphological subspecies in Borneo is maintained by low climatic suitability （high annual rainfall） in certain regions. The extirpation of M. haemacephala from Borneo and southern Malay Peninsula might have been driven by unsuitable conditions （high temperature seasonality） in central Sundaland and/or the lack of open woodlands. Our study shows that ecological niche modeling adds a powerful dimension to our attempt to understand lineage evolution in space [Current Zoology 61 （5）： 922-934, 2015].
