对疑似为患有绵羊肺炎支原体的病羊无菌采取病料,经临床症状、病理剖检、病原分离培养、形态学观察、生化试验、生长抑制试验,代谢抑制试验,人工接种发病,间接血凝试验,对内蒙古克什克腾旗羊群以呼吸道疾病为主要特征的传染病进行初步诊...对疑似为患有绵羊肺炎支原体的病羊无菌采取病料,经临床症状、病理剖检、病原分离培养、形态学观察、生化试验、生长抑制试验,代谢抑制试验,人工接种发病,间接血凝试验,对内蒙古克什克腾旗羊群以呼吸道疾病为主要特征的传染病进行初步诊断,参考国际已知支原体16S r RNA序列,选取共同保守性强的片段设计出一对引物,提取病原分离株(MY1)和人工感染分离株(SY1)培养物的菌体DNA进行PCR扩增并克隆、测序。将该序列与Gen Bank中支原体序列比较,结果证明,分离株MY1和SY1与Y-98序列与绵羊肺炎支原体标准株Y-98同源性为99.7%,与丝状支原体山羊亚种标准株PG3同源性为78.7%,故确定分离株为绵羊肺炎支原体。展开更多
In order to amplify the complete genome of enJSRV from the strain of Inner Mongolia (enJSRV-NM), we used enJSRV-specific and JSRV-specific DNA probes in dot blot hybridization. Seven pairs of primers were designed bas...In order to amplify the complete genome of enJSRV from the strain of Inner Mongolia (enJSRV-NM), we used enJSRV-specific and JSRV-specific DNA probes in dot blot hybridization. Seven pairs of primers were designed based on Genbank sequences. Seven fragments were obtained by PCR and were cloned into the PMD19-T vectors. The recombinant plasmids were sequenced and analyzed. The results showed that the genome was 7 942 bp in length and contained four overlapping open reading frames corresponding to the gag, pro, pol and env genes as well as an additional open reading frame (orf-x) that overlaps the 3' end of the pol gene. The nucleotide acid sequences of the enJSRV-NM loci were compared with the sequences of South Africa enJS56A1 strain (Accession No. AF153615) and USA JSRV21 strain (Accession No. AF105220). The nucleotide acid identities were 99.2% and 92.3% respectively. Two zinc fingers were found in the NC region in the predicted amino acid sequence. However, the YXXM motif, which is a reliable molecular marker for the infectious exogenous virus, was not found in the TM region. It was found that the enJSRV-NM region was 90%-98% identical at the amino acid level to its exogenous infectious counterparts in most of the retroviral genome. This is the first nucleotide sequence of enJSRV reported in P.R China. The resource work has provided a wide range of information useful not only for expression genomics and annotation of genomic DNA sequence, but also for further research on the clinical diagnosis of OPA.展开更多
文摘对疑似为患有绵羊肺炎支原体的病羊无菌采取病料,经临床症状、病理剖检、病原分离培养、形态学观察、生化试验、生长抑制试验,代谢抑制试验,人工接种发病,间接血凝试验,对内蒙古克什克腾旗羊群以呼吸道疾病为主要特征的传染病进行初步诊断,参考国际已知支原体16S r RNA序列,选取共同保守性强的片段设计出一对引物,提取病原分离株(MY1)和人工感染分离株(SY1)培养物的菌体DNA进行PCR扩增并克隆、测序。将该序列与Gen Bank中支原体序列比较,结果证明,分离株MY1和SY1与Y-98序列与绵羊肺炎支原体标准株Y-98同源性为99.7%,与丝状支原体山羊亚种标准株PG3同源性为78.7%,故确定分离株为绵羊肺炎支原体。
基金National Natural Science Foundation ofChina (Grant No. 30560108)
文摘In order to amplify the complete genome of enJSRV from the strain of Inner Mongolia (enJSRV-NM), we used enJSRV-specific and JSRV-specific DNA probes in dot blot hybridization. Seven pairs of primers were designed based on Genbank sequences. Seven fragments were obtained by PCR and were cloned into the PMD19-T vectors. The recombinant plasmids were sequenced and analyzed. The results showed that the genome was 7 942 bp in length and contained four overlapping open reading frames corresponding to the gag, pro, pol and env genes as well as an additional open reading frame (orf-x) that overlaps the 3' end of the pol gene. The nucleotide acid sequences of the enJSRV-NM loci were compared with the sequences of South Africa enJS56A1 strain (Accession No. AF153615) and USA JSRV21 strain (Accession No. AF105220). The nucleotide acid identities were 99.2% and 92.3% respectively. Two zinc fingers were found in the NC region in the predicted amino acid sequence. However, the YXXM motif, which is a reliable molecular marker for the infectious exogenous virus, was not found in the TM region. It was found that the enJSRV-NM region was 90%-98% identical at the amino acid level to its exogenous infectious counterparts in most of the retroviral genome. This is the first nucleotide sequence of enJSRV reported in P.R China. The resource work has provided a wide range of information useful not only for expression genomics and annotation of genomic DNA sequence, but also for further research on the clinical diagnosis of OPA.
