Here we report the codon bias and the mRNA secondary structural features of the hemagglutinin(HA)cleavage site basic amino acid regions of avian influenza virus H5N1 subtypes.We have developed a dynamic extended foldi...Here we report the codon bias and the mRNA secondary structural features of the hemagglutinin(HA)cleavage site basic amino acid regions of avian influenza virus H5N1 subtypes.We have developed a dynamic extended folding strategy to predict RNA secondary structure with RNAstructure 4.1 program in an iterative extension process.Statistical analysis of the sequences showed that the HA cleavage site basic amino acids favor the adenine-rich codons,and the corresponding mRNA fragments are mainly in the folding states of single-stranded loops.Our sequential and structural analyses showed that to prevent and control these highly pathogenic viruses,that is,to inhibit the gene expression of avian influenza virus H5N1 subtypes,we should consider the single-stranded loop regions of the HA cleavage site-coding sequences as the targets of RNA interference.展开更多
线粒体相关内质网膜(mitochondria-associated ER membrane,MAM)是线粒体与内质网之间形成的具有一定功能的动态膜结构。MAM在维持内质网和线粒体正常功能的同时,也广泛参与氧化应激、脂质代谢、自噬、Ca^(2+)稳态等多种生理和病理生理...线粒体相关内质网膜(mitochondria-associated ER membrane,MAM)是线粒体与内质网之间形成的具有一定功能的动态膜结构。MAM在维持内质网和线粒体正常功能的同时,也广泛参与氧化应激、脂质代谢、自噬、Ca^(2+)稳态等多种生理和病理生理过程调节。随着研究的开展,透射电子显微镜、免疫荧光、邻位连接技术、基于分裂绿色荧光蛋白的接触位点传感器等技术逐渐被用于MAM功能和机制的相关研究,为深入揭示MAM在疾病发生发展中的功能提供了技术支撑。本文主要就目前MAM相关检测方法作一综述,为更好地开展MAM相关研究提供参考和借鉴。展开更多
基金the National Natural Science Foundation of China(Grants No.90208018,39970412and90303018)the CAS Knowledge Innovation Project Cross-Frontier Project(No.KJCX1-08)
文摘Here we report the codon bias and the mRNA secondary structural features of the hemagglutinin(HA)cleavage site basic amino acid regions of avian influenza virus H5N1 subtypes.We have developed a dynamic extended folding strategy to predict RNA secondary structure with RNAstructure 4.1 program in an iterative extension process.Statistical analysis of the sequences showed that the HA cleavage site basic amino acids favor the adenine-rich codons,and the corresponding mRNA fragments are mainly in the folding states of single-stranded loops.Our sequential and structural analyses showed that to prevent and control these highly pathogenic viruses,that is,to inhibit the gene expression of avian influenza virus H5N1 subtypes,we should consider the single-stranded loop regions of the HA cleavage site-coding sequences as the targets of RNA interference.
文摘线粒体相关内质网膜(mitochondria-associated ER membrane,MAM)是线粒体与内质网之间形成的具有一定功能的动态膜结构。MAM在维持内质网和线粒体正常功能的同时,也广泛参与氧化应激、脂质代谢、自噬、Ca^(2+)稳态等多种生理和病理生理过程调节。随着研究的开展,透射电子显微镜、免疫荧光、邻位连接技术、基于分裂绿色荧光蛋白的接触位点传感器等技术逐渐被用于MAM功能和机制的相关研究,为深入揭示MAM在疾病发生发展中的功能提供了技术支撑。本文主要就目前MAM相关检测方法作一综述,为更好地开展MAM相关研究提供参考和借鉴。