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基于XML的主体基因及其实现
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作者 王嘉 董明楷 +1 位作者 史中植 关小敏 《计算机应用》 CSCD 北大核心 2003年第2期50-52,55,共4页
移动主体是一种自治地、有目的地在网络中移动的软件实体,它通过与分布资源的交互而完成分布任务。文中针对现有的移动主体技术在移动灵活性、个性化信息的存储等方面的不足,提出了将主体个性化信息和功能模块分离的新思路,把基因概念... 移动主体是一种自治地、有目的地在网络中移动的软件实体,它通过与分布资源的交互而完成分布任务。文中针对现有的移动主体技术在移动灵活性、个性化信息的存储等方面的不足,提出了将主体个性化信息和功能模块分离的新思路,把基因概念引入到主体系统中,用于刻画主体的基本特征,并以XML技术作为个性化信息的存储方式,通过XML的相关技术简化了移动主体的构造,增强了移动主体的灵活性和适用性。 展开更多
关键词 XML 主体基因 计算机网络 移动主体 电子商务
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肾癌转移关键基因的Top250基因集富集分析
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作者 徐珊 张海宝 +4 位作者 种岳 田娟华 穆丽君 贺大林 杜岳峰 《现代泌尿外科杂志》 CAS 2018年第8期620-625,共6页
目的筛选影响肾癌转移的关键基因,为肾癌治疗研究奠定科学依据。方法从基因表达综合数据库(GEO)下载基因表达谱(GSE47352),利用GEO2R在线分析提取肾癌转移患者和未转移患者显著表达差异的前250位基因,运用基因本体(GO)富集分析、京都基... 目的筛选影响肾癌转移的关键基因,为肾癌治疗研究奠定科学依据。方法从基因表达综合数据库(GEO)下载基因表达谱(GSE47352),利用GEO2R在线分析提取肾癌转移患者和未转移患者显著表达差异的前250位基因,运用基因本体(GO)富集分析、京都基因与基因组百科全书(KEGG)信号通路富集分析、PPI(蛋白质-蛋白质互作用)网络构建以及Venn分析方法,筛选影响肾癌转移的核心基因。结果通过对比富集分析,PPI以及Venn分析结果,我们发现肾癌转移患者和未转移患者显著变化是细胞应激、细胞粘附特性、血管生成以及细胞向外信息传递等生物学功能,其中粘连蛋白α4链(LAMA4)和JUN有可能是肾癌转移的核心基因。结论 JUN和LAMA4可能在肾癌转移中发挥着重要作用,是肾癌转移的核心基因,本研究后续将对JUN和LAMA4基因进行生物学功能验证。 展开更多
关键词 肾癌 基因表达综合数据库(GEO) 肿瘤转移 基因主体(GO) 关键基因
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Genetic Analysis of Embryo Production Frequency in Wheat × Maize Cross
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作者 刘琨 宁波 +4 位作者 李宏生 李绍祥 顾坚 赵红 杨木军 《Agricultural Science & Technology》 CAS 2015年第9期1869-1872,共4页
A DH population derived from C49S-87/01Y1-1069 was used to study the inheritance of wheat haploid embryo production frequency(EPF) in wheat × maize cross with the mixed major gene and polygene inheritance model... A DH population derived from C49S-87/01Y1-1069 was used to study the inheritance of wheat haploid embryo production frequency(EPF) in wheat × maize cross with the mixed major gene and polygene inheritance model of quantitative traits. The results showed that the EPF of wheat × maize cross was controlled by two dominant epistatic genes and polygene with gene effects of 1.95 for the first major gene, 6.69 for the second one and 2.80 for the polygene. The inheritability of major genes was as high as 72.09%, suggesting that the differences in EPF among wheat materials were mainly influenced by genotype. However, non-genetic factors were still important, especially for wheat materials with low EPF. 展开更多
关键词 Wheat × maize cross Haploid embryo production frequency Double Haploid population Mixed major gene and polygene inheritance model
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解释人类全DNA的新线索:三重螺旋DNA
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作者 胡连荣 《国外医学情报》 1992年第20期4-4,共1页
提到构成遗传基因主体的DNA,人们都会想到它的双螺旋体。对双螺旋体外还存在第三条链,并相互绞成三重螺旋这一结构,最近引起学术界的广泛关注。它不仅对调解遗传基因功能有重大意义,将来还可以人为地向细胞移入一条单链,为癌症及艾滋病... 提到构成遗传基因主体的DNA,人们都会想到它的双螺旋体。对双螺旋体外还存在第三条链,并相互绞成三重螺旋这一结构,最近引起学术界的广泛关注。它不仅对调解遗传基因功能有重大意义,将来还可以人为地向细胞移入一条单链,为癌症及艾滋病的治疗开辟新路。 展开更多
关键词 三重螺旋 遗传基因 基因功能 双螺旋 艾滋病 重大意义 螺旋体 基因主体 解释 人类
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c-Fos enhances the survival of thymocytes during positive selection by upregulating Bcl-2 被引量:2
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作者 Xiaoming Wang Yafeng Zhang +2 位作者 Gang Xiao Xiang Gao Xiaolong Liu 《Cell Research》 SCIE CAS CSCD 2009年第3期340-347,共8页
T cells are derived from progenitor thymocytes, of which only a minority receive the appropriate TCR signal, undergo positive selection and mature. Owing to the very short lifespan of thymocytes, the prerequisite for ... T cells are derived from progenitor thymocytes, of which only a minority receive the appropriate TCR signal, undergo positive selection and mature. Owing to the very short lifespan of thymocytes, the prerequisite for posi- tive selection is survival. TCR signal-induced Bcl-2 expression is believed to play a dominant role in the survival of positively selecting thymocytes, but how Bcl-2 is directly regulated is unknown. Here we report that the immediate early gene (IEG) c-Fos can stimulate the expression of Bcl-2, depending on a specific AP-l-binding site in the Bcl-2 promoter. In c-Fos transgenic (Fos-Tg) mice, c-Fos binds to this site and promotes the expression of Bcl-2. As a result, Fos-Tg thymocytes exhibited enhanced survival, and more mature single-positive (SP) thymocytes were generated, even on a unique TCR background. The TCR repertoire remained normal in Fos-Tg mice. Our results identified c-Fos as the mediator of the stimulatory effect of TCR signaling on Bcl-2 expression. Therefore, c-Fos, as an IEG, because of its early response ability, can quickly rescue the survival of short-lived thymocytes during positive selection. Our results provide novel insight into the mechanism regulating the survival of positively selecting thymocytes. 展开更多
关键词 C-FOS BCL-2 SURVIVAL thymocyte development positive selection
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Hepatitis B virus infection and the risk of hepatocellular carcinoma 被引量:25
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作者 Ya-Jun Tan 《World Journal of Gastroenterology》 SCIE CAS CSCD 2011年第44期4853-4857,共5页
Epidemiological studies have provided overwhelming evidence for a causal role of chronic hepatitis B virus(HBV) infection in the development of hepatocellular carcinoma(HCC).However,the pathogenesis of HBV infection a... Epidemiological studies have provided overwhelming evidence for a causal role of chronic hepatitis B virus(HBV) infection in the development of hepatocellular carcinoma(HCC).However,the pathogenesis of HBV infection and carcinogenesis of HBV-associated HCC are still elusive.This review will summarize the current knowledge on the mechanisms involved in HBV-related liver carcinogenesis.The role of HBV in tumor formation appears to be complex,and may involve both direct and indirect mechanisms.Integration of HBV DNA into the host genome occurs at early steps of clonal tumor expansion,and it has been shown to enhance the host chromosomal instability,leading to large inverted duplications,deletions and chromosomal translocations.It has been shown that the rate of chromosomal alterations is increased significantly in HBV-related tumors.Prolonged expression of the viral regulatory HBV x protein may contribute to regulating cellular transcription,protein degradation,proliferation,and apoptotic signaling pathways,and it plays a critical role in the development of hepatocellular carcinoma. 展开更多
关键词 Hepatocellular carcinoma Hepatitis B virus infection Hepatitis B virus genotypic variations Hepatitis B virus x protein
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Template-module assembly to prepare low-molecular-weight gene transport system with enhanced transmembrane capability 被引量:4
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作者 YANG Bin LV Yin +5 位作者 WANG QingRong LIU Yun AN Hong FENG Jun ZHANG XianZheng ZHUO RenXi 《Science China Chemistry》 SCIE EI CAS 2014年第4期558-567,共10页
Based on specific host-guest interactions between amine-modified [3-cyclodextrin (CD-TAEA) and functional adamantane (AD) derivatives, a module-template strategy has been proposed for the construction of low-molec... Based on specific host-guest interactions between amine-modified [3-cyclodextrin (CD-TAEA) and functional adamantane (AD) derivatives, a module-template strategy has been proposed for the construction of low-molecular-weight cationic assem- blies for gene transport. This strategy offers great flexibility in terms of the introduction of mono- or multi-functionality by the inclusion of one or more adamantane-based modules with the desired functionalities. As proof of concept, phenylboronic acid (PB) containing adamantane (PB-AD) was used as a model module in the hope of offering enhanced cytosolic delivery in con- sideration of the special affinity of PB groups with cell membranes. The physicochemical properties of the complexes formed with plasmid DNA, such as particle size, zeta potential and morphology were investigated. Confocal laser scanning microsco- py and flow cytometry experiments demonstrated the important contribution of the functional PB-AD module to the consider- ably enhanced intracellular internalization and uptake by cellular nuclei. Compared to the parent CD-TAEA, PB-AD/CD- TAEA assemblies mediated higher transfection rates, which were even comparable to that of PEI25K. In addition, PB-AD/CD- TAEA displayed much lower cytotoxicity than PEI25K in both 293T and HeLa cell lines. The encouraging results suggest that CD-TAEA can be developed as a powerful template capable of readily accommodating various AD-based modules giving versatile functionalities for improved transfection. 展开更多
关键词 template-module assembly host-guest interaction gene delivery
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JAMIP:an artificial-intelligence aided data-driven infrastructure for computational materials informatics 被引量:6
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作者 Xin-Gang Zhao Kun Zhou +13 位作者 Bangyu Xing Ruoting Zhao Shulin Luo Tianshu Li Yuanhui Sun Guangren Na Jiahao Xie Xiaoyu Yang Xinjiang Wang Xiaoyu Wang Xin He Jian Lv Yuhao Fu Lijun Zhang 《Science Bulletin》 SCIE EI CSCD 2021年第19期1973-1985,M0003,共14页
Materials informatics has emerged as a promisingly new paradigm for accelerating materials discovery and design.It exploits the intelligent power of machine learning methods in massive materials data from experiments ... Materials informatics has emerged as a promisingly new paradigm for accelerating materials discovery and design.It exploits the intelligent power of machine learning methods in massive materials data from experiments or simulations to seek new materials,functionality,and principles,etc.Developing specialized facilities to generate,collect,manage,learn,and mine large-scale materials data is crucial to materials informatics.We herein developed an artificial-intelligence-aided data-driven infrastructure named Jilin Artificial-intelligence aided Materials-design Integrated Package(JAMIP),which is an open-source Python framework to meet the research requirements of computational materials informatics.It is integrated by materials production factory,high-throughput first-principles calculations engine,automatic tasks submission and monitoring progress,data extraction,management and storage system,and artificial intelligence machine learning based data mining functions.We have integrated specific features such as an inorganic crystal structure prototype database to facilitate high-throughput calculations and essential modules associated with machine learning studies of functional materials.We demonstrated how our developed code is useful in exploring materials informatics of optoelectronic semiconductors by taking halide perovskites as typical case.By obeying the principles of automation,extensibility,reliability,and intelligence,the JAMIP code is a promisingly powerful tool contributing to the fast-growing field of computational materials informatics. 展开更多
关键词 DATA-DRIVEN Materials informatics Computational material First-principles calculation High-throughput calculation
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