生物基因序列信息处理中的数据库技术(综述)

介绍国内外生物基因序列信息处理的数据库技术,该技术包括对基因信息的获取、存储、查询、分析和注释等方面,重点介绍了国际上常用的基因序列分析算法,包括BLAST算法和SmithWaterman算法.同时介绍了生物基因序列信息处理的数据库技术发展的趋势.

Cloning and Sequence Analysis of Sheeppox Virus RPO30 Gene

[Objective] The study aimed to clone RPO30 gene from Sheeppox virus （SPPV） and predict the structure and function of the sequence. [Method] RPO30 gene of SPPV was cloned with PCR, linked into pMD18-T simple vector and then transformed into E. coli DH5a. In blue-white screen, the white colonies were selected to prepare plasmids. The positive plasmids were selected by double digestion and PCR, and then sequenced. Finally, the structure and function of the sequence obtained were predicted by bioinformatics methods. [Results] The RPO30 gene was successfully obtained; its ORF was 585 bp, encoding 193 amino acids and containing a recognition site for Hind III. Moreover, the SPPV RPO30 gene shared different homologies with the RPO30 gene sequences of other pox virus strains from GenBank database. Further analysis by biological software showed that in RPO30 protein, amino acids 4-12, 18-26, 50- 61, 68- 92 and 176-190 had a high possibility to form the active center, and acting to these regions was likely to inactivate the enzyme encoded by the sequence, thus to inhibit viral replication efficiently. [Conclusion] This study will lay foundation for further study on the structure and function of RPO30.

向日葵抗列当育种研究进展

向日葵是世界四大油料作物之一,列当是对向日葵生长危害极为严重的一类寄生植物,且在全球范围内的发生面积逐年增加,对向日葵产业发展造成严重危害。培育抗列当品种是防治向日葵列当最为有效的途径,也是目前育种家的首要目标。育种家们通过传统的育种方法鉴定抗性基因,培育了一系列向日葵抗列当品种,并在世界范围内向日葵主栽区广泛种植,有效缓解了向日葵列当对该产业的冲击。然而,随着毒力更强的列当生理小种的出现与传播,亟待培育新的、抗性更强的品种。本文综述了新的、毒性强的列当生理小种的结构与分布,对如何利用分子标记辅助选择(MAS)策略提高向日葵的抗性分析,对向日葵抗列当基因序列信息做了归纳总结,对向日葵抗列当育种研究发展前景进行了分析与展望。