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水稻黑条矮缩病毒基因组片段S10的cDNA克隆及全序列分析 被引量:8
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作者 张恒木 陈剑平 +1 位作者 薛庆中 雷娟利 《中国水稻科学》 CAS CSCD 北大核心 2002年第1期24-28,共5页
基于 RT- PCR策略克隆了水稻黑条矮缩病毒 (rice black- streaked dwarf virus,RBSDV)浙江分离株基因组 S10 ,并测定了它的全序列。结果表明 ,水稻黑条矮缩病毒浙江分离物 (RBSDV- Zj)基因组片段 S10全长 180 1nt(EMBL登录号为AJ2 97433... 基于 RT- PCR策略克隆了水稻黑条矮缩病毒 (rice black- streaked dwarf virus,RBSDV)浙江分离株基因组 S10 ,并测定了它的全序列。结果表明 ,水稻黑条矮缩病毒浙江分离物 (RBSDV- Zj)基因组片段 S10全长 180 1nt(EMBL登录号为AJ2 97433) ,仅含有一个大的开放阅读框 (open reading frame,ORF) ,编码一个 6 3.1k D的多肽 ,与日本的水稻黑条矮缩病毒基因组片段 S10在核苷酸和氨基酸水平上同源性分别为 93.8%和 96 .2 %;与意大利玉米粗缩病毒 (maize rough dwarfvirus,MRDV)的基因组片段 S10在核苷酸和氨基酸水平上的同源性分别为 87.7%和 92 .0 %,推测它们是同一病毒的不同地理小种。 展开更多
关键词 水稻黑条矮缩病毒 基因线片段 序列分析 CDNA克隆
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DGGE Analysis on Mitochondrial Cyt b Gene of Eriocheir sinensis and Eriocheir hepuensis 被引量:2
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作者 王晓梅 李晓东 +1 位作者 王茜 靳婷婷 《Agricultural Science & Technology》 CAS 2011年第6期890-892,907,共4页
[Objective] The aim was to investigate the possibility to analyze the genetic diversity of Eriocheir sinensis and Eriocheir hepuensis by using the technique denaturing gradient gel electrophoresis(DGGE).[Method] Mit... [Objective] The aim was to investigate the possibility to analyze the genetic diversity of Eriocheir sinensis and Eriocheir hepuensis by using the technique denaturing gradient gel electrophoresis(DGGE).[Method] Mitochondrial cyt b gene fragment was amplified from 180 individuals of five populations of E.sinensis and a population of E.hepuensis and then analyzed by using DGGE.[Result] All PCR products showed two kinds of electrophoretic mobility on DGGE.The PCR products of all individuals from E.hepuensis showed the same mobility with that of the individuals from 46.7% of Jiangdu population,23.3% of Yizheng population and 20.0% of Wenzhou population of E.sinensis,while the rest of the individuals from the three populations of E.sinensis mentioned above as well as all the individuals of Nanjing and Panjin populations showed the same mobility,which was higher compared with that of E.hepuensis.The results indicated that there was the same genetic marker in E.sinensis populations as that of E.hepuensis population,which was consistent with previous studies.[Conclusion] DGGE technique could be used to analyze the genetic diversity of Chinese mitten crab. 展开更多
关键词 E.sinensis E.hepuensis Mitochondrial cyt b gene fragment DGGE
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A Method for Detecting Adhesive Related-Factors of Streptococcus suis Serotype 2 by Real-time PCR 被引量:1
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作者 汪伟 何孔旺 +9 位作者 倪艳秀 周俊明 张雪寒 俞正玉 吕立新 茅爱华 温立斌 王小敏 李彬 郭容莉 《Agricultural Science & Technology》 CAS 2013年第10期1378-1382,共5页
[Objective] This study aimed to establish a method for quantitative detection of mRNA transcriptional level of SS2 adhesive related-factors of Streptococcus suis serotype 2 (SS2) by fluorescent quantitative PCR. []V... [Objective] This study aimed to establish a method for quantitative detection of mRNA transcriptional level of SS2 adhesive related-factors of Streptococcus suis serotype 2 (SS2) by fluorescent quantitative PCR. []Vlethod] The gene fragments en- coding SS2 adhesive related-factors MRP, FBPS and CPS2J and a housekeeping gene aroA were amplified by reverse transcription PCR from the total RNA of SS2, cloned, and sequenced. The recombinant plasmids containing the target genes were constructed, and used as templates in Real-time PCR. [Result] Dynamic curves, stan- dard curves and melting curves of the adhesive related-factors and aroA were ob- tained by the optimized Real-time PCR system. The standard curves showed a good linear relationship between template copy number and circulation number, and the correlation coefficients (FF) of the standard curves were over 0.995. Also, these as- says were highly specific a^d there was single specific melting peak for every gene. Moreover, the assays were highly sensitive and had a detection limit of 1.0×102 copies in 1 μl of initial templates. Finally, it was highly repeatable and had a coeffi- cient of variation less than 2% for intra-assay. [Conclusion] This study will provide a way to reveal the adhesion mechanism of SS2 to different host cells at molecular level. 展开更多
关键词 Streptococcus suis serotype 2 Adhesive related-factors (adhesins) Real- time PCR
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