Discovering hidden information of gene ontology based on complex networks analysis

To resolve the ontology understanding problem, the structural features and the potential important terms of a large-scale ontology are investigated from the perspective of complex networks analysis. Through the empirical studies of the gene ontology with various perspectives, this paper shows that the whole gene ontology displays the same topological features as complex networks including ＂small world＂ and ＂scale-free＂,while some sub-ontologies have the ＂scale-free＂ property but no ＂small world＂ effect.The potential important terms in an ontology are discovered by some famous complex network centralization methods.An evaluation method based on information retrieval in MEDLINE is designed to measure the effectiveness of the discovered important terms.According to the relevant literature of the gene ontology terms,the suitability of these centralization methods for ontology important concepts discovering is quantitatively evaluated.The experimental results indicate that the betweenness centrality is the most appropriate method among all the evaluated centralization measures.

Performance-based system seismic assessment for long-span suspension bridges under two-level seismic hazard

Since there are few studies on the performance-based seismic evaluation of the long-span suspension bridge system under two-level earthquake hazard in Chinese code,the developed procedure of this study can be regarded as a general program to assess the seismic performance of the overall system for long-span suspension bridges.In the procedure,the probabilistic seismic demand models of multiple bridge components were developed by nonlinear time-history analyses incorporating the related uncertainties,and the component-level fragility curves were calculated by the reasonable definition of limit states of the corresponding components in combination with seismic hazard analysis.The bridge repair cost ratios used to evaluate the system seismic performance were derived through the performance-based methodology and the damage probability of critical components.Furthermore,the repair cost ratios of the overall bridge system that was retrofitted with fluid viscous dampers for the main bridge and changed restraint systems for the approach bridges were compared.The results show that peak ground velocity and peak ground acceleration can be selected as the optimal intensity measurements of long-span suspension bridges using the TOPSIS(technique for order preference by similarity to an ideal solution).The bridge repair cost ratios can serve as accurate evaluation indicators to provide an efficient evaluation of retrofit measures.The seismic evaluation of long-span bridges is misled when ignoring the interaction of adjacent structures.However,the repair cost ratios of a bridge system that has optimum seismic performance are less sensitive to the relative importance of adjacent structures.

A Chess Master Model for Classroom Teaching and Teacher/Researcher Development

Tongji University and Beijing Foreign Studies University recently have set up a joint Multimodal, Multimedia, and Multi-environment Learning Research Lab （3-ML Lab for short） for in-service teachers to videotape their own classroom teaching so that they can reflect upon real-life performances. This paper presents an outline of a chess master model for in- service teacher development involving the use of the 3-ML Lab. The model consists of four essential components： （a） the design phase, （b） the performance phase, （c） the reflection phase, and （d） the application phase. A mini-case study is presented to demonstrate how the model works in practice. The model is evaluated against other models of teacher development as found in Wallace （1991）. A distinctive feature of the chess master model is its methodology in multimodal text analysis （MTA） as a way for critical self-reflection.