Epiphytic bacterial communities on two common submerged macrophytes in Taihu Lake: diversity and host-specificity

Leaves of terrestrial and aquatic plants are home to a wide diversity of bacterial species. However, the diversity and variability of epiphytic bacteria on their submerged plant hosts remains poorly understood. We investigated the diversity and composition of epiphytic bacteria from two common submerged macrophytes: Vallisneria natans and Hydrilla verticillata in Taihu Lake, Jiangsu, China, using methods of terminal restriction fragment length polymorphisms (T-RFLP) and clone library analyses targeted at bacterial 16S rRNA genes. The results show that: (1) the libraries of the two waterweeds contain wide phylogenetic distribution of bacteria, and that the sequences of the two libraries can be separated into 93 OTUs (at 97% similar value); (2) Betaproteobacteria, including Burkholderiales, was the most abundant bacterial group on both plants. Cyanobacteria and Gammaproteobacteria were the second largest groups on V. natans and H. verticillata, respectively. Both clone libraries included some sequences related to those of methanotrophs and nitrogen-fixing bacteria; (3) Cluster analysis of the T-RFLP profiles showed two distinct clusters corresponding to the two plant populations. Both ANOSIM of the T-RFLP data and Libshuff analysis of the two clone libraries indicated a significant difference in epiphytic bacterial communities between the two plants. Therefore, the epiphytic bacterial communities on submerged macrophytes appear to be diverse and host-specific, which may aid in understanding the ecological functions of submerged macrophytes in general.

Plant diversity promotes soil fungal pathogen richness under fertilization in an alpine meadow

Aims The effects of fertilization on fungal plant pathogens in agricultural soils have been studied extensively.However,we know little about how fertilization affects the relative abundance and richness of soil fungal plant pathogens in natural ecosystems,either through altering the soil properties or plant community composition.Methods Here,we used data from a 7-year nitrogen(N)addition experiment in an alpine meadow on the Qinghai-Tibetan Plateau to test how N addition affects the relative abundance and richness of soil fungal plant pathogens,as determined using Miseq sequencing of ITS1 gene biomarkers.We also evaluated the relative importance of changes in soil properties versus plant species diversity under N addition.Important Findings Using general linear model selection and a piecewise structural equation model,we found that N addition increased the relative abundance of soil fungal plant pathogens by significantly altering soil properties.However,higher host plant species richness led to higher soil fungal plant pathogen richness,even after excluding the effects of N addition.We conclude that the relative abundance and richness of soil fungal plant pathogens are regulated by different mechanisms in the alpine meadow.Continuous worldwide N inputs(through both fertilizer use and nitrogen deposition)not only cause species losses via altered plant species interactions,but also produce changes in soil properties that result in more abundant soil fungal plant pathogens.This increase in pathogen relative abundance may seriously threaten ecosystem health,thus interrupting important ecosystem functions and services.