Turbots( Schophthalmus maximus), one of the most important economic marine flatfish species, fail to undergo final spawning and spermiation naturally under artificial farming conditions. In vertebrates, reproduction i...Turbots( Schophthalmus maximus), one of the most important economic marine flatfish species, fail to undergo final spawning and spermiation naturally under artificial farming conditions. In vertebrates, reproduction is regulated by the brain-pituitary-gonadal axis(BPG-axis), and gonadotropin releasing hormone(GnRH) is one of its key components. Therefore, to better understand the physiology of reproduction in the turbot, three of the genes encoding GnRH subtypes— sbGnRH, c GnRH-II and sGnRH —were cloned and sequenced by isolating the cDNA sequences. The localizations and patterns of expression of their mRNAs were also evaluated during seasonal gonadal development. All three mRNAs were expressed abundantly in the brain; sbGnRH and sGnRH mRNAs were also detected in the gonads and pituitary gland, and sbGnRH expression was much higher than that of sGnRH, indicating the critical role of sbGnRH in regulating the BPG-axis. Moreover, the brain expression patterns of sbGnRH and sGnRH mRNAs showed an increased trend during gonadal development, peaking in mature stages. This indicated the direct regulation of gonadal development by the GnRH system. In addition, c GnRH-II mRNA expression showed no significant variations, suggesting that c GnRH-II is not critically involved in the control of reproduction. Further, the mRNA abundances of the three GnRH forms in the breeding season were significantly higher than those in immature and post-breeding stages in all analyzed brain areas. Therefore, we propose that sbGnRH is the most important hormone for the regulation of reproduction in turbot via the BPG-axis. These results will help in better understanding the reproductive endocrine mechanisms of turbots and lay the groundwork for additional studies aimed at comparing the reproductive physiology of wild individuals with those raised under artificial conditions.展开更多
The Strait of Khuran is among the most important marine habitats in the Persian Gulf. It is the location of the largest Avicennia Marina mangroves along the Persian Gulf shoreline and is a major nursery region for the...The Strait of Khuran is among the most important marine habitats in the Persian Gulf. It is the location of the largest Avicennia Marina mangroves along the Persian Gulf shoreline and is a major nursery region for the fish and to breeding, wintering and migrant water birds. This paper presents dynamics of the currents in the Strait of Khuran using the current data collected by fixed current meters. The analysis of the data showed that the currents in the Strait of Khuran were highly dominated by tidal forcing with mixed semi diurnal behavior. The tidal currents were strong and reached to a maximum velocity of 123 cm/s in the spring tide. Tidal analysis showed that the tidal current constituents (M2, $2, N2, K1, O1) are dominant with M2 component as the major one. The tidal currents occurred basically along the strait. The results show a westward residual flow along the strait with an average of 5.6 cm/s during the study. The direction of the flow indicates that any pollution discharged into the industrial developing eastern part of the strait has the potential to affect the sensitive ecosystem in the western part.展开更多
The greatest Phanerozoic mass extinction happened at the end-Permian to earliest Triassic. About 95% species, 82% genera, and more than half families became extinct, constituting the sole macro-mass extinction in geol...The greatest Phanerozoic mass extinction happened at the end-Permian to earliest Triassic. About 95% species, 82% genera, and more than half families became extinct, constituting the sole macro-mass extinction in geological history. This event not only caused the great extinction but also destroyed the 200 Myr-long Paleozoic marine ecosystem, prompted its transition to Mesozoic ecosystem, and induced coal gap on land as well as reef gap and chert gap in ocean. The biotic crisis during the Paleozoic-Mesozoic transition was a long process of co-evolution between geospheres and biosphere. The event sequence at the Permian-Triassic boundary (PTB) reveals two-episodic pattern of rapidly deteriorating global changes and biotic mass ex- tinction and the intimate relationship between them. The severe global changes coupling multiple geospheres may have affect- ed the Pangea integration on the Earth's surface spheres, which include: the Pangea integration→enhanced mountain height and basin depth, changes of wind and ocean current systems; enhanced ocean basin depth→the greatest Phanerozoic regression at PTB, disappearance of epeiric seas and subsequent rapid transgression; the Pangea integration→thermal isolation effect of continental lithosphere and decrease of mid-ocean ridges→development of continental volcanism; two-episode volcanism causing LIPs of the Emeishan Basalt and the Siberian Trap (25%251 Ma)→global warming and mass extinction; continental aridification and replacement of monsoon system by latitudinal wind system→destruction of vegetation; enhanced weathering and CH4 emission→negative excursion of δ^13C; mantle plume→crust doming→regression; possible relation between the Illawarra magnetic reversal and the PTB extinction, and so on. Mantle plume produced the Late Permian LIPs and mantle convection may have caused the process of the Pangea integration. Subduction, delamination, and accumulation of the earth's cool lithospheric material at the "D" layer of CMB started mantle plume by heat compensation and disturbed the outer core ther- too-convection, and the latter in turn would generate the mid-Permian geomagnetic reversal. These core and mantle perturbations may have caused the Pangea integration and two successive LIPs in the Permian, and probably finally the mass extinction at the PTB.展开更多
Population genomic approaches are making rapid inroads in the study of non-model organisms, including marine taxa. To date, these marine studies have predominantly focused on rudimentary metrics describing the spatial...Population genomic approaches are making rapid inroads in the study of non-model organisms, including marine taxa. To date, these marine studies have predominantly focused on rudimentary metrics describing the spatial and environmental context of their study region (e.g., geographical distance, average sea surface temperature, average salinity). We contend that a more nuanced and considered approach to quantifying seascape dynamics and patterns can strengthen population genomic investigations and help identify spatial, temporal, and environmental factors associated with differing selective regimes or demographic histories. Nevertheless, approaches for quantifying marine landscapes are complicated. Characteristic features of the marine environment, including pelagic living in flowing water (experienced by most marine taxa at some point in their life cycle), require a well-designed spatial-temporal sampling strategy and analysis. Many genetic summary statistics used to describe populations may be inappropriate for marine species with large population sizes, large species ranges, stochastic recruitment, and asymmetrical gene flow. Finally, statistical approaches for testing associations between seascapes and population genomic patterns are still maturing with no single approach able to capture all relevant considerations. None of these issues are completely unique to marine systems and therefore similar issues and solutions will be shared for many organisms regardless of habitat. Here, we outline goals and spatial approaches for land- scape genomics with an emphasis on marine systems and review the growing empirical literature on seascape genomics. We review established tools and approaches and highlight promising new strategies to overcome select issues including a strategy to spatially optimize sampling. Despite the many challenges, we argue that marine systems may be especially well suited for identifying candidate genomic regions under environmentally mediated selection and that seascape genomic approaches are especially useful for identifying robust locus-by-environment associations.展开更多
基金Supported by the National Natural Science Foundation of China(Nos.31472264,31572602)the China Agriculture Research System(No.CARS-47)+1 种基金the Scientific and Technological Innovation Project Financially supported by Qingdao National Laboratory for Marine Science and Technology(Nos.2015ASKJ02,2015ASKJ02-03-03)the Youth Innovation Promotion Association CAS and Chinese Academy of Science and Technology Service Network Planning(No.KFJ-EWSTS-060)
文摘Turbots( Schophthalmus maximus), one of the most important economic marine flatfish species, fail to undergo final spawning and spermiation naturally under artificial farming conditions. In vertebrates, reproduction is regulated by the brain-pituitary-gonadal axis(BPG-axis), and gonadotropin releasing hormone(GnRH) is one of its key components. Therefore, to better understand the physiology of reproduction in the turbot, three of the genes encoding GnRH subtypes— sbGnRH, c GnRH-II and sGnRH —were cloned and sequenced by isolating the cDNA sequences. The localizations and patterns of expression of their mRNAs were also evaluated during seasonal gonadal development. All three mRNAs were expressed abundantly in the brain; sbGnRH and sGnRH mRNAs were also detected in the gonads and pituitary gland, and sbGnRH expression was much higher than that of sGnRH, indicating the critical role of sbGnRH in regulating the BPG-axis. Moreover, the brain expression patterns of sbGnRH and sGnRH mRNAs showed an increased trend during gonadal development, peaking in mature stages. This indicated the direct regulation of gonadal development by the GnRH system. In addition, c GnRH-II mRNA expression showed no significant variations, suggesting that c GnRH-II is not critically involved in the control of reproduction. Further, the mRNA abundances of the three GnRH forms in the breeding season were significantly higher than those in immature and post-breeding stages in all analyzed brain areas. Therefore, we propose that sbGnRH is the most important hormone for the regulation of reproduction in turbot via the BPG-axis. These results will help in better understanding the reproductive endocrine mechanisms of turbots and lay the groundwork for additional studies aimed at comparing the reproductive physiology of wild individuals with those raised under artificial conditions.
文摘The Strait of Khuran is among the most important marine habitats in the Persian Gulf. It is the location of the largest Avicennia Marina mangroves along the Persian Gulf shoreline and is a major nursery region for the fish and to breeding, wintering and migrant water birds. This paper presents dynamics of the currents in the Strait of Khuran using the current data collected by fixed current meters. The analysis of the data showed that the currents in the Strait of Khuran were highly dominated by tidal forcing with mixed semi diurnal behavior. The tidal currents were strong and reached to a maximum velocity of 123 cm/s in the spring tide. Tidal analysis showed that the tidal current constituents (M2, $2, N2, K1, O1) are dominant with M2 component as the major one. The tidal currents occurred basically along the strait. The results show a westward residual flow along the strait with an average of 5.6 cm/s during the study. The direction of the flow indicates that any pollution discharged into the industrial developing eastern part of the strait has the potential to affect the sensitive ecosystem in the western part.
基金supported by the National Basic Research Program of China(Grant No.2011CB808800)the 111 Project(Grant No.B08030)+1 种基金the National Natural Science Foundation of China(Grant Nos.40621002,40830212&40921062)the Fundamental Research Funds for the Central Universities(CUG130407)
文摘The greatest Phanerozoic mass extinction happened at the end-Permian to earliest Triassic. About 95% species, 82% genera, and more than half families became extinct, constituting the sole macro-mass extinction in geological history. This event not only caused the great extinction but also destroyed the 200 Myr-long Paleozoic marine ecosystem, prompted its transition to Mesozoic ecosystem, and induced coal gap on land as well as reef gap and chert gap in ocean. The biotic crisis during the Paleozoic-Mesozoic transition was a long process of co-evolution between geospheres and biosphere. The event sequence at the Permian-Triassic boundary (PTB) reveals two-episodic pattern of rapidly deteriorating global changes and biotic mass ex- tinction and the intimate relationship between them. The severe global changes coupling multiple geospheres may have affect- ed the Pangea integration on the Earth's surface spheres, which include: the Pangea integration→enhanced mountain height and basin depth, changes of wind and ocean current systems; enhanced ocean basin depth→the greatest Phanerozoic regression at PTB, disappearance of epeiric seas and subsequent rapid transgression; the Pangea integration→thermal isolation effect of continental lithosphere and decrease of mid-ocean ridges→development of continental volcanism; two-episode volcanism causing LIPs of the Emeishan Basalt and the Siberian Trap (25%251 Ma)→global warming and mass extinction; continental aridification and replacement of monsoon system by latitudinal wind system→destruction of vegetation; enhanced weathering and CH4 emission→negative excursion of δ^13C; mantle plume→crust doming→regression; possible relation between the Illawarra magnetic reversal and the PTB extinction, and so on. Mantle plume produced the Late Permian LIPs and mantle convection may have caused the process of the Pangea integration. Subduction, delamination, and accumulation of the earth's cool lithospheric material at the "D" layer of CMB started mantle plume by heat compensation and disturbed the outer core ther- too-convection, and the latter in turn would generate the mid-Permian geomagnetic reversal. These core and mantle perturbations may have caused the Pangea integration and two successive LIPs in the Permian, and probably finally the mass extinction at the PTB.
文摘Population genomic approaches are making rapid inroads in the study of non-model organisms, including marine taxa. To date, these marine studies have predominantly focused on rudimentary metrics describing the spatial and environmental context of their study region (e.g., geographical distance, average sea surface temperature, average salinity). We contend that a more nuanced and considered approach to quantifying seascape dynamics and patterns can strengthen population genomic investigations and help identify spatial, temporal, and environmental factors associated with differing selective regimes or demographic histories. Nevertheless, approaches for quantifying marine landscapes are complicated. Characteristic features of the marine environment, including pelagic living in flowing water (experienced by most marine taxa at some point in their life cycle), require a well-designed spatial-temporal sampling strategy and analysis. Many genetic summary statistics used to describe populations may be inappropriate for marine species with large population sizes, large species ranges, stochastic recruitment, and asymmetrical gene flow. Finally, statistical approaches for testing associations between seascapes and population genomic patterns are still maturing with no single approach able to capture all relevant considerations. None of these issues are completely unique to marine systems and therefore similar issues and solutions will be shared for many organisms regardless of habitat. Here, we outline goals and spatial approaches for land- scape genomics with an emphasis on marine systems and review the growing empirical literature on seascape genomics. We review established tools and approaches and highlight promising new strategies to overcome select issues including a strategy to spatially optimize sampling. Despite the many challenges, we argue that marine systems may be especially well suited for identifying candidate genomic regions under environmentally mediated selection and that seascape genomic approaches are especially useful for identifying robust locus-by-environment associations.