具有通配符间隙约束的模式匹配问题在信息检索、计算生物学和序列模式挖掘等研究领域有重要的应用.提出了更一般性的模式匹配问题,即一般间隙和长度约束的严格模式匹配(strict pattern matching with general gaps and length constrain...具有通配符间隙约束的模式匹配问题在信息检索、计算生物学和序列模式挖掘等研究领域有重要的应用.提出了更一般性的模式匹配问题,即一般间隙和长度约束的严格模式匹配(strict pattern matching with general gaps and length constraints,简称SPANGLO).该问题具有如下4个特点:它是一种严格的精确模式匹配;允许序列中任意位置的字符被多次使用;模式串中可以包含多个一般间隙;对出现的总体长度进行了约束.最坏情况下,一个SPANGLO实例将转换出指数个非负间隙的严格模式匹配实例.为了有效地解决该问题,提出了子网树及其相关概念和性质.在此基础上提出了求解算法SubnettreeSpanglo(SETS),并给出算法的正确性和完备性证明,同时指出该算法的空间复杂度与时间复杂度分别为O(m MaxLen W)和O(MaxLen W m2 n),其中,m,n,MaxLen和W分别是模式和序列的长度、出现的最大长度约束和模式的最大间距.实验结果既验证了SPANGLO问题转换方法的正确性,又验证了该算法的正确性和有效性.展开更多
With ensured network connectivity in quantum channels, the issue of distributing entangled particles in wireless quantum communication mesh networks can be equivalently regarded as a problem of quantum backbone nodes ...With ensured network connectivity in quantum channels, the issue of distributing entangled particles in wireless quantum communication mesh networks can be equivalently regarded as a problem of quantum backbone nodes selection in order to save cost and reduce complexity. A minimum spanning tree（ MST）-based quantum distribution algorithm（ QDMST） is presented to construct the mesh backbone network. First, the articulation points are found,and for each connected block uncovered by the articulation points, the general centers are solved. Then, both articulation points and general centers are classified as backbone nodes and an M ST is formed. The quantum path between every two neighbor nodes on the MST is calculated. The nodes on these paths are also classified as backbone nodes. Simulation results validate the advantages of QDMST in the average backbone nodes number and average quantum channel distance compared to the existing random selection algorithm under multiple network scenarios.展开更多
文摘具有通配符间隙约束的模式匹配问题在信息检索、计算生物学和序列模式挖掘等研究领域有重要的应用.提出了更一般性的模式匹配问题,即一般间隙和长度约束的严格模式匹配(strict pattern matching with general gaps and length constraints,简称SPANGLO).该问题具有如下4个特点:它是一种严格的精确模式匹配;允许序列中任意位置的字符被多次使用;模式串中可以包含多个一般间隙;对出现的总体长度进行了约束.最坏情况下,一个SPANGLO实例将转换出指数个非负间隙的严格模式匹配实例.为了有效地解决该问题,提出了子网树及其相关概念和性质.在此基础上提出了求解算法SubnettreeSpanglo(SETS),并给出算法的正确性和完备性证明,同时指出该算法的空间复杂度与时间复杂度分别为O(m MaxLen W)和O(MaxLen W m2 n),其中,m,n,MaxLen和W分别是模式和序列的长度、出现的最大长度约束和模式的最大间距.实验结果既验证了SPANGLO问题转换方法的正确性,又验证了该算法的正确性和有效性.
基金Prospective Research Project on Future Networks of Jiangsu Province,China(No.BY2013095-1-18)
文摘With ensured network connectivity in quantum channels, the issue of distributing entangled particles in wireless quantum communication mesh networks can be equivalently regarded as a problem of quantum backbone nodes selection in order to save cost and reduce complexity. A minimum spanning tree（ MST）-based quantum distribution algorithm（ QDMST） is presented to construct the mesh backbone network. First, the articulation points are found,and for each connected block uncovered by the articulation points, the general centers are solved. Then, both articulation points and general centers are classified as backbone nodes and an M ST is formed. The quantum path between every two neighbor nodes on the MST is calculated. The nodes on these paths are also classified as backbone nodes. Simulation results validate the advantages of QDMST in the average backbone nodes number and average quantum channel distance compared to the existing random selection algorithm under multiple network scenarios.
