目的:5-HT1A基因C-1019G多态性与多种神经精神疾病如抑郁症、精神分裂症、焦虑症等的发生风险、症状严重程度及治疗效果存在关联。本研究旨在建立一种直接巢式PCR结合测序检测该位点的方法。方法:以口腔上皮细胞粗处理物为材料,通过直...目的:5-HT1A基因C-1019G多态性与多种神经精神疾病如抑郁症、精神分裂症、焦虑症等的发生风险、症状严重程度及治疗效果存在关联。本研究旨在建立一种直接巢式PCR结合测序检测该位点的方法。方法:以口腔上皮细胞粗处理物为材料,通过直接巢式PCR扩增包含5-HT1A基因C-1019G位点的靶片段,PCR产物经桑格测序鉴定基因型。结果:所检样本均能扩增出预期大小的PCR产物,测序峰图清晰。结论:成功建立了一种直接巢式PCR结合测序鉴定5-HT1A基因型的方法,有良好的应用前景。Objective: The C-1019G polymorphism of the 5-HT1A gene has been associated with the risk of occurrence, symptom severity, and treatment outcome of a variety of neuropsychiatric disorders, such as depression, schizophrenia, and anxiety disorders. The aim of this study was to establish a direct nested PCR combined with sequencing to detect this locus. Methods: The target fragment containing the C-1019G locus of the 5-HT1A gene was amplified by direct nested PCR using crude processed oral epithelial cells, and the PCR product was genotyped by Sanger sequencing. Results: PCR products of expected size were amplified from all the samples tested, and the sequencing peaks were clear. Conclusion: A direct nested PCR combined with sequencing method was successfully established to identify the genotypes of 5-HT1A gene, which has good prospects for application.展开更多
本试验比较了4种提取小麦-玉米轮作免耕田土壤DNA的方法,并对巢式PCR反应体系和扩增条件进行了优化,建立了适合检测土壤中镰刀菌多样性的PCR-DGGE体系。结果表明:土壤DNA的质量是影响PCR扩增结果的关键因子,试剂盒Fast DNA SPINfor Soi...本试验比较了4种提取小麦-玉米轮作免耕田土壤DNA的方法,并对巢式PCR反应体系和扩增条件进行了优化,建立了适合检测土壤中镰刀菌多样性的PCR-DGGE体系。结果表明:土壤DNA的质量是影响PCR扩增结果的关键因子,试剂盒Fast DNA SPINfor Soil所提土壤DNA片段接近23 bp,A260/A280比值为1.84,DNA产量为18.1μg/g,更适合进行PCR反应。DNA模板的浓度决定PCR扩增结果,第一轮PCR扩增的DNA模板适宜量为2～5 ng,以第一轮PCR产物的原液为模板进行第二轮PCR扩增,在退火温度为67℃时扩增结果最好。PCR产物在变性范围为45%～60%的丙烯酰胺梯度凝胶中电泳7～8 h,其条带能够完全分离,可以用作土壤中镰刀菌多样性的检测。展开更多
采用PCR-DGGE(PCR-denaturing gradient gel electrophoresis)技术对一个典型的凡纳滨对虾(Litopeneaus vannamei)海水养殖系统细菌群落进行分子分析。结果表明,沿岸水、蓄水池、养殖池水具有较高的细菌种类多样性,而蓄水池进水、对虾...采用PCR-DGGE(PCR-denaturing gradient gel electrophoresis)技术对一个典型的凡纳滨对虾(Litopeneaus vannamei)海水养殖系统细菌群落进行分子分析。结果表明,沿岸水、蓄水池、养殖池水具有较高的细菌种类多样性,而蓄水池进水、对虾粪样、肠壁定植细菌样以及排水渠污水的细菌多样性程度低。每种环境群落的优势种明显。3个养殖池水样(Y1、Y2、Y3)、2个沿岸水样(W1、W2)、2个粪样(F1、F2)、蓄水池水样(B1、B2)及2个肠壁定植细菌样(G1、G2)各自具有高度群落相似性。BLAST结果表明,12个条带克隆序列所代表优势种很可能来源于以下几个属:柔发菌属(Flexithrix)、黏纤维菌属(Cytophaga)、Dyella属、聚球菌属(Synechococcus)、Chlorarachnion属、支原菌属(Mycoplasma)、草螺菌属(Herbaspirillum)、河氏菌属(Hahella)、Ruegeria属。本研究表明,PCR-DGGE技术可以用于海水对虾养殖系统的细菌群落结构分析。对于海水对虾养殖系统来说,一些序列所代表的主要细菌种类极有可能是很少被注意到或研究过的,具有潜在的研究价值。展开更多
文摘目的:5-HT1A基因C-1019G多态性与多种神经精神疾病如抑郁症、精神分裂症、焦虑症等的发生风险、症状严重程度及治疗效果存在关联。本研究旨在建立一种直接巢式PCR结合测序检测该位点的方法。方法:以口腔上皮细胞粗处理物为材料,通过直接巢式PCR扩增包含5-HT1A基因C-1019G位点的靶片段,PCR产物经桑格测序鉴定基因型。结果:所检样本均能扩增出预期大小的PCR产物,测序峰图清晰。结论:成功建立了一种直接巢式PCR结合测序鉴定5-HT1A基因型的方法,有良好的应用前景。Objective: The C-1019G polymorphism of the 5-HT1A gene has been associated with the risk of occurrence, symptom severity, and treatment outcome of a variety of neuropsychiatric disorders, such as depression, schizophrenia, and anxiety disorders. The aim of this study was to establish a direct nested PCR combined with sequencing to detect this locus. Methods: The target fragment containing the C-1019G locus of the 5-HT1A gene was amplified by direct nested PCR using crude processed oral epithelial cells, and the PCR product was genotyped by Sanger sequencing. Results: PCR products of expected size were amplified from all the samples tested, and the sequencing peaks were clear. Conclusion: A direct nested PCR combined with sequencing method was successfully established to identify the genotypes of 5-HT1A gene, which has good prospects for application.
文摘采用PCR-DGGE(PCR-denaturing gradient gel electrophoresis)技术对一个典型的凡纳滨对虾(Litopeneaus vannamei)海水养殖系统细菌群落进行分子分析。结果表明,沿岸水、蓄水池、养殖池水具有较高的细菌种类多样性,而蓄水池进水、对虾粪样、肠壁定植细菌样以及排水渠污水的细菌多样性程度低。每种环境群落的优势种明显。3个养殖池水样(Y1、Y2、Y3)、2个沿岸水样(W1、W2)、2个粪样(F1、F2)、蓄水池水样(B1、B2)及2个肠壁定植细菌样(G1、G2)各自具有高度群落相似性。BLAST结果表明,12个条带克隆序列所代表优势种很可能来源于以下几个属:柔发菌属(Flexithrix)、黏纤维菌属(Cytophaga)、Dyella属、聚球菌属(Synechococcus)、Chlorarachnion属、支原菌属(Mycoplasma)、草螺菌属(Herbaspirillum)、河氏菌属(Hahella)、Ruegeria属。本研究表明,PCR-DGGE技术可以用于海水对虾养殖系统的细菌群落结构分析。对于海水对虾养殖系统来说,一些序列所代表的主要细菌种类极有可能是很少被注意到或研究过的,具有潜在的研究价值。
