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单重态[H,C,C,N]体系势能面的ab initio计算研究
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作者 于海涛 陈国美 +2 位作者 刘蕾 池玉娟 傅宏刚 《黑龙江大学自然科学学报》 CAS 2001年第4期81-85,97,共6页
用abinitio方法在QCISD(t)/6—311++G(3df 2p)∥MP2/6—311++G(d,p)并包括零 点能(△ZPVE)水平下计算得到了单重态[H,C,C,N]体系的势能面(PES)。在势能面上找到了[... 用abinitio方法在QCISD(t)/6—311++G(3df 2p)∥MP2/6—311++G(d,p)并包括零 点能(△ZPVE)水平下计算得到了单重态[H,C,C,N]体系的势能面(PES)。在势能面上找到了[H,C, C,N]体系6个异构体和11个过渡态,并用频率进行了验证.其中具有 CCN三元环的 HC(CN)异构 体在势能面上具有最低能量,其次是HCCN和HCNC结构,能量分别比HC(CN)高3.38和 15.35kcal/mol.基于体系的势能面,在单重态 HCCN异构体中,只有具有 HNC三元环的异构体(HN)CC不具备动力学稳定性,这为实验检测及合成其5种异构体提供了理论依据. 展开更多
关键词 abinitio方法 单重态HCCN 异构体作用 势能面 星际分子 量子化学计算
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The structure of Rap1 in complex with RIAM reveals specificity determinants and recruitment mechanism 被引量:3
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作者 Hao Zhang Yu-Chung Chang Mark L. Brennan Jinhua Wu 《Journal of Molecular Cell Biology》 SCIE CAS CSCD 2014年第2期128-139,共12页
The small GTPase Rap1 induces integrin activation via an inside-out signaling pathway mediated by the Rapl-interacting adaptor mol- ecule (RIAM). Blocking this pathway may suppress tumor metastasis and other disease... The small GTPase Rap1 induces integrin activation via an inside-out signaling pathway mediated by the Rapl-interacting adaptor mol- ecule (RIAM). Blocking this pathway may suppress tumor metastasis and other diseases that are related to hyperactive integrins. However, the molecular basis for the specific recognition of RIAM by Rap1 remains largely unknown. Herein we present the crystal structure of an active, GTP-bound GTPase domain of Rap1 in complex with the Ras association (RA)-pleckstrin homology (PH) structural module of RIAM at 1.65 A. The structure reveals that the recognition of RIAM by Rap1 is governed by side-chain interactions. Several side chains are critical in determining specificity of this recognition, particularly the Lys31 residue in Rap1 that is oppositely charged compared with the Glu31/Asp31 residue in other Ras GTPases. Lys31 forms a salt bridge with RIAM residue Glu212, making it the key specificity determinant of the interaction. We also show that disruption of these interactions results in reduction of Rapl:RIAM association, leadingto a loss of co-clustering and cell adhesion. Our findings elucidate the molecular mechanism by which RIAM med- iates Rapl-induced integrin activation. The crystal structure also offers new insight into the structural basis for the specific recruitment of RA-PH module-containing effector proteins by their smaU GTPase partners. 展开更多
关键词 RIAM Rap1 integrin signaling inside-out signaling crystal structure RA-PH
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