[Objective] The aim of this study was to observe the agronomic,yield and quality traits of Ningchun 4 and its parents under the same environmental conditions,as well as to carry out molecular detection on the backgrou...[Objective] The aim of this study was to observe the agronomic,yield and quality traits of Ningchun 4 and its parents under the same environmental conditions,as well as to carry out molecular detection on the background genes distribution of the corresponding traits.[Method]Ningchun 4 and its parents Sonora 64,Hongtu,Abbondanza,Quality were used as materials to detect the agronomic and quality traits,as well as to analyze the genetic variation laws by molecular determination method.[Result]Ningchun 4 had inherited the advantages of bigger spike,red and hard grain from Sonora 64 and higher 1 000-grain weight from Hongtu.However,it had also inherited the disadvantages of late-maturing from Sonora 64 and lower tillering ability from Hongtu;the grain quality of Ningchun 4 was slightly lower than the Sonora 64;Ningchun 4 had high quality subunit of 5＋10,which had good dough rheological properties.[Conclusion]Ningchun 4 had inherited the long photoperiod characteristics and no-resistant to slow-leaf rusting and stripe rust characteristics from Hongtu and low PPO activity,high yellow pigments content from parents.展开更多
[ Objective] The study was to investigate the agronomic traits and breeding characteristics of genic male sterile material Mian 7AB-4- 2 in Brassica napus. [ Method] The differences in agronomic traits and polymorphis...[ Objective] The study was to investigate the agronomic traits and breeding characteristics of genic male sterile material Mian 7AB-4- 2 in Brassica napus. [ Method] The differences in agronomic traits and polymorphisms in SSR markers, between the genic male sterile material Mian 7AB-4-2 in Brassica napus and its sisterly line Mian 7AB-4-1 were investigated by hybridization and molecular identification; and the percentage of sterile individuals of Mian 7AB-4-2 and of the hybrids with its sisterly line Mian 7AB-4-1 from test cross and back cross were also studled. [ Result] Mian 7AB-4-2 was not significantly different in agronomic traits from its sisterly line Mian 7AB-4-1 at 0.05 probability level. The per- centages of sterile individuals in the pollinated fertile Mian 7AB-4-2 plants were over 60%, and that in its sisterly line Mian 7AB-4-1 was about 25%. In test crosses with other nine sterile lines, Mian 7AB-4-1 kept the percentage of sterile individuals of sterile lines over 90%, and the percentage of sterile individuals from back cross over 80%. With regard to molecular markers, Mian 7AB-4-2 and its sisterly line Mian 7AB-4-1 were different in the band number from SSR primers a2 and E10. [ Conclusion] The results indicate that Mian 7AB-4-2 is helpful for rapeseed breeding, quickening the application of new materials in field breeding.展开更多
The KRAS oncogene is mutated in approximately 35%-45% of colorectal cancers, and KRAS mutational status testing has been highlighted in recent years. The most frequent mutations in this gene, point substitutions in co...The KRAS oncogene is mutated in approximately 35%-45% of colorectal cancers, and KRAS mutational status testing has been highlighted in recent years. The most frequent mutations in this gene, point substitutions in codons 12 and 13, were validated as negative predictors of response to anti-epidermal growth factor receptor antibodies. Therefore, determining the KRAS mutational status of tumor samples has become an essential tool for managing patients with colorectal cancers. Currently, a variety of detection methods have been established to analyze the mutation status in the key regions of the KRAS gene; however, several challenges remain related to standardized and uniform testing, including the selection of tumor samples, tumor sample processing and optimal testing methods. Moreover, new testing strategies, in combination with the mutation analysis of BRAF , PIK3CA and loss of PTEN proposed by many researchers and pathologists, should be promoted. In addition, we recommend that microsatellite instability, a prognostic factor, be added to the abovementioned concomitant analysis. This review provides an overview of KRAS biology and the recent advances in KRAS mutation testing. This review also addresses other aspects of status testing for determining the appropriate treatment and offers insight into the potential drawbacks of mutational testing.展开更多
The main purpose of this study was to detect an association of cytoplasmic signal transducers and activators of transcription-1 （STAT1） with milk production traits in 472 Holstein and 283 Jersey cattle breeds of Tur...The main purpose of this study was to detect an association of cytoplasmic signal transducers and activators of transcription-1 （STAT1） with milk production traits in 472 Holstein and 283 Jersey cattle breeds of Turkey. This gene, located on chromosome 2, was chosen due to its role on development of mammary gland. A polymorphism of selected 314 bp allele fragment was detected by the restriction fragment length polymorphism analysis of polymerase chain reaction-amplified fragments （PCR-RFLP） method and also confirmed by DNA sequencing. The association tests were conducted between STAT1 genotypes and some economically important dairy traits. The genotypes for C/T as a single nucleotide polymorphism （SNP） were identified at interval 60 cM to 63 cM. The effects of STAT1 gene on milk production traits were not significant in Holstein cows, although animals with CT genotypes showed fairly close to significant value for the corrected 305 d milk yield. However, Jersey cows with/7＂ genotype were 2.07 kg higher for test-day milk yield （P 〈 0.05）, 0.13 kg for fat yield （P 〈 0.01） and 0.07 kg for protein yield （P 〈 0.05） compared with animals having CC and CT genotypes. Definitely, the further research should be conducted to search this gene intensively with larger samples to identify polymorphism and any association between the economically important traits and genotypic class in Holstein cows. Finally, based on the findings, it was concluded that STATI gene might be used as a potential candidate gene to improve milk yield and milk fat and protein contents in dairy cows breeding programs.展开更多
The performance of the Ordered-Statistic Smallest Of (OSSO) Constant False Alarm Rate (CFAR) with binary integration in Weibull background with known shape parameter is analyzed, in the cases that the processor operat...The performance of the Ordered-Statistic Smallest Of (OSSO) Constant False Alarm Rate (CFAR) with binary integration in Weibull background with known shape parameter is analyzed, in the cases that the processor operates in homogeneous background and non-homogeneous situation caused by multiple targets and clutter edge. The analytical models of this scheme for the performance evaluation are given. It is shown that the OSSO-CFAR with binary integration can greatly improve the detection performance with respect to the single pulse processing case. As the clutter background becomes spiky, a high threshold S of binary integration (S/M) is required in order to obtain a good detection performance in homogeneous background. Moreover, the false alarm performance of the OSSO-CFAR with binary integration is more sensitive to the changes of shape parameter or power level of the clutter background.展开更多
Cancer cell dormancy is the main cause of cancer recurrence and failure of therapy as dormant cells evade not only the anticancer drugs but also the host immune system. These dormant cells veil themselves from detecti...Cancer cell dormancy is the main cause of cancer recurrence and failure of therapy as dormant cells evade not only the anticancer drugs but also the host immune system. These dormant cells veil themselves from detection by imaging and/or using biomarkers, which imposes an additional problem in targeting such cells. A similar form of hibernation process known as encystation is studied in detail for pathogenic unicellular eukaryotic microorganisms. By examination using microarray gene expression profiles, immunocytochemistry tools, and siRNAs during the process of encystation, understanding the covert features of cancer cell dormancy as proposed could be possible. This knowledge can be extended to dormant cancer cells to uncover the mechanisms that underlie this ghost, yet dangerous state of human cancers. We propose a strategy to induce dormancy and exit this state by application of knowledge gained from the encystation induction and retrieval processes in pathogenic eukaryotic microorganisms. Given that early detection and characterization of dormant malignant tumor cells is important as a general strategy to monitor and prevent the development of overt metastatic disease, this homology may enable the design of therapies that could either awake the dormant cell from dormancy to make it available for therapies or prolong such a phase to make cancer appear as a chronic disease展开更多
The etiological agent of severe acute respiratory syndrome(SARS) was identified as a new coronavirus,termed SARS-CoV. Establishment of an efficient and sensitive diagnostic system of SARS-CoV genetic materials is cruc...The etiological agent of severe acute respiratory syndrome(SARS) was identified as a new coronavirus,termed SARS-CoV. Establishment of an efficient and sensitive diagnostic system of SARS-CoV genetic materials is crucial for SARS control. In this study,we quantified SARS-CoV mRNAs in both infected cell culture lysate and in supernatant by using Real-time quantitative revere transcription-PCR based on EvaGreenTM dye and Taqman-MGB probes. For extensive evaluation of sensitivities and specificities,13 pairs of primers and 4 probes were designed based on different genes of SARS-CoV. Glyceraldehydes-3-phosphate dehydrogenase(GAPDH) was selected as the internal control gene. Results showed that S-gene-specific PCR was the most sensitive for detection,but because of its sequence variability in the different viral strains,primers and a probe based on the N gene were suitable substitutions. Meanwhile,we found the mRNA concentrations in cell culture lysates were much higher than in cell supernatant and facilited more sensitive detection of the SARS-CoV.展开更多
The purpose of this work is the study of a mathematical model to discretize cracks at continuous mechanical systems, applying all the available properties at computational algorithm using the methodology of state obse...The purpose of this work is the study of a mathematical model to discretize cracks at continuous mechanical systems, applying all the available properties at computational algorithm using the methodology of state observers to detect, localize and evaluate the crack conditions, seeking the model limitations through an experiment developed at the mechanical department of UNESP, llha Solteira, S^o Paulo-Brazil. Three different notch sizes were placed, one by one, at the top surface of a cantilever beam （to be considered as a crack at the mechanical system） and harmonic forces were applied at the tip of the beam with three different frequencies, for each notch size, to obtain experimental data to run the diagnosis algorithm. From the results it was possible to infer that the observation system performance increases with the raising of the crack size, which can be explained by the model, that gets more accurate with bigger crack sizes, however, when the propagation of the crack is considered at the model, the diagnosis of the crack presence tends to be more difficult. It was also possible to conclude that the developed algorithm works properly for systems which excitation frequencies are higher than 20 Hz and different from the natural frequencies of the system, due to influence of dynamic response of the crack at the model.展开更多
The ability to detect and identify quantitative trait loci (QTLs) in a single population is often limited. Analyzing multiple populations in QTL analysis improves the power of detecting QTLs and provides a better unde...The ability to detect and identify quantitative trait loci (QTLs) in a single population is often limited. Analyzing multiple populations in QTL analysis improves the power of detecting QTLs and provides a better understanding of their functional allelic variation and distribution. In this study, a consensus map of the common carp was constructed, based on four populations, to compare the distribution and variation of QTLs. The consensus map spans 2371.6 cM across the 42 linkage groups and comprises 257 microsatellites and 421 SNPs, with a mean marker interval of 3.7 cM/marker. Sixty-seven QTLs affecting four growth traits from the four populations were mapped to the consensus map. Only one QTL was common to three populations, and nine QTLs were detected in two populations. However, no QTL was common to all four populations. The results of the QTL comparison suggest that the QTLs are responsible for the phenotypic variability observed for these traits in a broad array of common carp germplasms. The study also reveals the different genetic performances between major and minor genes in different populations.展开更多
We propose an efficient hyperconcentration protocol for distilling maximally hyperentangled state from partially entangled pure state, resorting to the projection measurement on an auxiliary photon. In our scheme, two...We propose an efficient hyperconcentration protocol for distilling maximally hyperentangled state from partially entangled pure state, resorting to the projection measurement on an auxiliary photon. In our scheme, two photons simultaneously entangled in polarization states and spatial modes are considered. One party performs quantum nondemolition detections on his photon and an additional photon to produce three photon hyperentangled state, then he projects the assistant photon into an orthogonal basis composed of both the polarization and spatial degree of freedom.Then the state of the left two photons collapses into maximally hyperentangled state with a certain probability. In the rest cases, some less-entangled states are obtained, which can be used as resource for the next round concentration. By repeating the concentration process for several rounds, a higher success probability can be obtained, which makes our scheme useful in practical quantum information applications.展开更多
基金Supported by Natural Science Fund of Ningxia(NZ0866)~~
文摘[Objective] The aim of this study was to observe the agronomic,yield and quality traits of Ningchun 4 and its parents under the same environmental conditions,as well as to carry out molecular detection on the background genes distribution of the corresponding traits.[Method]Ningchun 4 and its parents Sonora 64,Hongtu,Abbondanza,Quality were used as materials to detect the agronomic and quality traits,as well as to analyze the genetic variation laws by molecular determination method.[Result]Ningchun 4 had inherited the advantages of bigger spike,red and hard grain from Sonora 64 and higher 1 000-grain weight from Hongtu.However,it had also inherited the disadvantages of late-maturing from Sonora 64 and lower tillering ability from Hongtu;the grain quality of Ningchun 4 was slightly lower than the Sonora 64;Ningchun 4 had high quality subunit of 5＋10,which had good dough rheological properties.[Conclusion]Ningchun 4 had inherited the long photoperiod characteristics and no-resistant to slow-leaf rusting and stripe rust characteristics from Hongtu and low PPO activity,high yellow pigments content from parents.
基金Supported by National High-tech R&D Program of China(2001AA241104, 2004AA241104)Key Breeding Project of Sichuan Province (200107001-1-6-1, 2006YZGG-5)Key Quality Project of Sichuan Province(2006YZGG-23)~~
文摘[ Objective] The study was to investigate the agronomic traits and breeding characteristics of genic male sterile material Mian 7AB-4- 2 in Brassica napus. [ Method] The differences in agronomic traits and polymorphisms in SSR markers, between the genic male sterile material Mian 7AB-4-2 in Brassica napus and its sisterly line Mian 7AB-4-1 were investigated by hybridization and molecular identification; and the percentage of sterile individuals of Mian 7AB-4-2 and of the hybrids with its sisterly line Mian 7AB-4-1 from test cross and back cross were also studled. [ Result] Mian 7AB-4-2 was not significantly different in agronomic traits from its sisterly line Mian 7AB-4-1 at 0.05 probability level. The per- centages of sterile individuals in the pollinated fertile Mian 7AB-4-2 plants were over 60%, and that in its sisterly line Mian 7AB-4-1 was about 25%. In test crosses with other nine sterile lines, Mian 7AB-4-1 kept the percentage of sterile individuals of sterile lines over 90%, and the percentage of sterile individuals from back cross over 80%. With regard to molecular markers, Mian 7AB-4-2 and its sisterly line Mian 7AB-4-1 were different in the band number from SSR primers a2 and E10. [ Conclusion] The results indicate that Mian 7AB-4-2 is helpful for rapeseed breeding, quickening the application of new materials in field breeding.
基金Supported by Science and Technology Commission of Shanghai Municipality, No. 10DJ1400501
文摘The KRAS oncogene is mutated in approximately 35%-45% of colorectal cancers, and KRAS mutational status testing has been highlighted in recent years. The most frequent mutations in this gene, point substitutions in codons 12 and 13, were validated as negative predictors of response to anti-epidermal growth factor receptor antibodies. Therefore, determining the KRAS mutational status of tumor samples has become an essential tool for managing patients with colorectal cancers. Currently, a variety of detection methods have been established to analyze the mutation status in the key regions of the KRAS gene; however, several challenges remain related to standardized and uniform testing, including the selection of tumor samples, tumor sample processing and optimal testing methods. Moreover, new testing strategies, in combination with the mutation analysis of BRAF , PIK3CA and loss of PTEN proposed by many researchers and pathologists, should be promoted. In addition, we recommend that microsatellite instability, a prognostic factor, be added to the abovementioned concomitant analysis. This review provides an overview of KRAS biology and the recent advances in KRAS mutation testing. This review also addresses other aspects of status testing for determining the appropriate treatment and offers insight into the potential drawbacks of mutational testing.
文摘The main purpose of this study was to detect an association of cytoplasmic signal transducers and activators of transcription-1 （STAT1） with milk production traits in 472 Holstein and 283 Jersey cattle breeds of Turkey. This gene, located on chromosome 2, was chosen due to its role on development of mammary gland. A polymorphism of selected 314 bp allele fragment was detected by the restriction fragment length polymorphism analysis of polymerase chain reaction-amplified fragments （PCR-RFLP） method and also confirmed by DNA sequencing. The association tests were conducted between STAT1 genotypes and some economically important dairy traits. The genotypes for C/T as a single nucleotide polymorphism （SNP） were identified at interval 60 cM to 63 cM. The effects of STAT1 gene on milk production traits were not significant in Holstein cows, although animals with CT genotypes showed fairly close to significant value for the corrected 305 d milk yield. However, Jersey cows with/7＂ genotype were 2.07 kg higher for test-day milk yield （P 〈 0.05）, 0.13 kg for fat yield （P 〈 0.01） and 0.07 kg for protein yield （P 〈 0.05） compared with animals having CC and CT genotypes. Definitely, the further research should be conducted to search this gene intensively with larger samples to identify polymorphism and any association between the economically important traits and genotypic class in Holstein cows. Finally, based on the findings, it was concluded that STATI gene might be used as a potential candidate gene to improve milk yield and milk fat and protein contents in dairy cows breeding programs.
基金Supported by the National Natural Science Foundation of China (No.61179016)
文摘The performance of the Ordered-Statistic Smallest Of (OSSO) Constant False Alarm Rate (CFAR) with binary integration in Weibull background with known shape parameter is analyzed, in the cases that the processor operates in homogeneous background and non-homogeneous situation caused by multiple targets and clutter edge. The analytical models of this scheme for the performance evaluation are given. It is shown that the OSSO-CFAR with binary integration can greatly improve the detection performance with respect to the single pulse processing case. As the clutter background becomes spiky, a high threshold S of binary integration (S/M) is required in order to obtain a good detection performance in homogeneous background. Moreover, the false alarm performance of the OSSO-CFAR with binary integration is more sensitive to the changes of shape parameter or power level of the clutter background.
文摘Cancer cell dormancy is the main cause of cancer recurrence and failure of therapy as dormant cells evade not only the anticancer drugs but also the host immune system. These dormant cells veil themselves from detection by imaging and/or using biomarkers, which imposes an additional problem in targeting such cells. A similar form of hibernation process known as encystation is studied in detail for pathogenic unicellular eukaryotic microorganisms. By examination using microarray gene expression profiles, immunocytochemistry tools, and siRNAs during the process of encystation, understanding the covert features of cancer cell dormancy as proposed could be possible. This knowledge can be extended to dormant cancer cells to uncover the mechanisms that underlie this ghost, yet dangerous state of human cancers. We propose a strategy to induce dormancy and exit this state by application of knowledge gained from the encystation induction and retrieval processes in pathogenic eukaryotic microorganisms. Given that early detection and characterization of dormant malignant tumor cells is important as a general strategy to monitor and prevent the development of overt metastatic disease, this homology may enable the design of therapies that could either awake the dormant cell from dormancy to make it available for therapies or prolong such a phase to make cancer appear as a chronic disease
基金The Knowledge Innovation Program of Chinese Academy of Sciences (KSCX2-YW-N-065)FP6 projects DISSECT (N°SP22-CT-2004-511060)EPIS-ARS (N°SP22-CT-2004-511603)
文摘The etiological agent of severe acute respiratory syndrome(SARS) was identified as a new coronavirus,termed SARS-CoV. Establishment of an efficient and sensitive diagnostic system of SARS-CoV genetic materials is crucial for SARS control. In this study,we quantified SARS-CoV mRNAs in both infected cell culture lysate and in supernatant by using Real-time quantitative revere transcription-PCR based on EvaGreenTM dye and Taqman-MGB probes. For extensive evaluation of sensitivities and specificities,13 pairs of primers and 4 probes were designed based on different genes of SARS-CoV. Glyceraldehydes-3-phosphate dehydrogenase(GAPDH) was selected as the internal control gene. Results showed that S-gene-specific PCR was the most sensitive for detection,but because of its sequence variability in the different viral strains,primers and a probe based on the N gene were suitable substitutions. Meanwhile,we found the mRNA concentrations in cell culture lysates were much higher than in cell supernatant and facilited more sensitive detection of the SARS-CoV.
文摘The purpose of this work is the study of a mathematical model to discretize cracks at continuous mechanical systems, applying all the available properties at computational algorithm using the methodology of state observers to detect, localize and evaluate the crack conditions, seeking the model limitations through an experiment developed at the mechanical department of UNESP, llha Solteira, S^o Paulo-Brazil. Three different notch sizes were placed, one by one, at the top surface of a cantilever beam （to be considered as a crack at the mechanical system） and harmonic forces were applied at the tip of the beam with three different frequencies, for each notch size, to obtain experimental data to run the diagnosis algorithm. From the results it was possible to infer that the observation system performance increases with the raising of the crack size, which can be explained by the model, that gets more accurate with bigger crack sizes, however, when the propagation of the crack is considered at the model, the diagnosis of the crack presence tends to be more difficult. It was also possible to conclude that the developed algorithm works properly for systems which excitation frequencies are higher than 20 Hz and different from the natural frequencies of the system, due to influence of dynamic response of the crack at the model.
基金supported by the National Basic Research Program of China (2010CB126305)the Special Fund for Agro-scientific Research in the Public Interest (200903045)National High Technology Research and Development Program of China (2011AA100402)
文摘The ability to detect and identify quantitative trait loci (QTLs) in a single population is often limited. Analyzing multiple populations in QTL analysis improves the power of detecting QTLs and provides a better understanding of their functional allelic variation and distribution. In this study, a consensus map of the common carp was constructed, based on four populations, to compare the distribution and variation of QTLs. The consensus map spans 2371.6 cM across the 42 linkage groups and comprises 257 microsatellites and 421 SNPs, with a mean marker interval of 3.7 cM/marker. Sixty-seven QTLs affecting four growth traits from the four populations were mapped to the consensus map. Only one QTL was common to three populations, and nine QTLs were detected in two populations. However, no QTL was common to all four populations. The results of the QTL comparison suggest that the QTLs are responsible for the phenotypic variability observed for these traits in a broad array of common carp germplasms. The study also reveals the different genetic performances between major and minor genes in different populations.
基金Supported by the National Natural Science Foundation of China under Grant No.11004258the Fundamental Research Funds for the Central Universities under Grant No.CQDXWL-2012-014
文摘We propose an efficient hyperconcentration protocol for distilling maximally hyperentangled state from partially entangled pure state, resorting to the projection measurement on an auxiliary photon. In our scheme, two photons simultaneously entangled in polarization states and spatial modes are considered. One party performs quantum nondemolition detections on his photon and an additional photon to produce three photon hyperentangled state, then he projects the assistant photon into an orthogonal basis composed of both the polarization and spatial degree of freedom.Then the state of the left two photons collapses into maximally hyperentangled state with a certain probability. In the rest cases, some less-entangled states are obtained, which can be used as resource for the next round concentration. By repeating the concentration process for several rounds, a higher success probability can be obtained, which makes our scheme useful in practical quantum information applications.
