In order to identify the molecular markers that can be widely used in the breeding of Brassica napus L.varieties with high seed oil content under different genetic backgrounds,we developed a Kompetitive Allele Specifi...In order to identify the molecular markers that can be widely used in the breeding of Brassica napus L.varieties with high seed oil content under different genetic backgrounds,we developed a Kompetitive Allele Specific PCR(KASP)marker for seed oil content on the basis of the results from available studies.The verification in the F_(2) population showed that the marker was closely linked to the quantitative trait locus(QTL)for oil content on chromosome A05.The findings helped to breed the‘Fengyou’varieties with high seed oil content in the middle reaches of the Yangtze River.展开更多
The crushing of leaves is the most time and effort-consuming part in DNA extraction which is a fundamental step in the study of molecular biology. In this study, a new rapid and batch-oriented crushing method for DNA ...The crushing of leaves is the most time and effort-consuming part in DNA extraction which is a fundamental step in the study of molecular biology. In this study, a new rapid and batch-oriented crushing method for DNA extraction from maize leaves was developed. In addition, the practicability of the developed method in molecular marker-assisted breeding was verified using SSR molecular maker technology so as to provide a rapid, batch-oriented, low-cost and non-toxic leafcrushing method for a large number of molecular marker tests, improving test efficiency.展开更多
Rice with low glutelin content is suitable as functional food for patients affected with diabetes and kidney failure. The fine mapping of the gene(s) responsible for low glutelin content will provide information regar...Rice with low glutelin content is suitable as functional food for patients affected with diabetes and kidney failure. The fine mapping of the gene(s) responsible for low glutelin content will provide information regarding the distribution of glutelin related genes in rice genome and will generate markers for the selection of low glutelin rice varieties. Following an SDS-PAGE screen of rice germplasm from Taihu Valley of China, Japonica selection W3660 is identified to be a novel mutant characterized with low glutelin content. For fine mapping the mutant gene for low glutelin content, F2 and F3 populations were derived from a cross between W3660 and Jingrennuo. SDS-PAGE analysis of the total endosperm protein showed that the low glutelin content trait was controlled by a single dominant nuclear gene. Genetic mapping, using SSRs, located this gene to chromosome 2, in the region between SSR2-001/SSR2-004 and RM1358. The dis- tances of the two markers to the target gene were 1.1 cM and 3.8 cM respectively. By semi-quantitative RT-PCR analysis, the transcripts of GluB4/GluB5 genes located within the region do not change. However, GluB5 gene located proximal to SSR2-001/SSR2-004 was specifically reduced. SSR profiles of seven Japonica varieties were compared with that of W3660 for loci in the relevant genetic region. The markers SSR2-004 and RM1358 were used for marker- assisted selection. The selection efficiencies of SSR2-004 and RM1358 were 96.8% and 92.7% respectively. This provides a standard starting point for the breeding of low glutelin content rice varieties in China.展开更多
This paper discusses and sums up the basic criterions of guaranteeing the labeling quality and abstracts the four basic factors including the conflict for a label with a label, overlay for label with the features, pos...This paper discusses and sums up the basic criterions of guaranteeing the labeling quality and abstracts the four basic factors including the conflict for a label with a label, overlay for label with the features, position’s priority and the association for a label with its feature. By establishing the scoring system, a formalized four-factors quality evaluation model is constructed. Last, this paper introduces the experimental result of the quality evaluation model applied to the automatic map labeling system-MapLabel.展开更多
In this work, we study a class of special Finsler metrics F called arctangent Finsler metric, which is a special （α, β）-metric, where a is a Riemannian metric and β is a 1-form, We obtain a sufficient and necessa...In this work, we study a class of special Finsler metrics F called arctangent Finsler metric, which is a special （α, β）-metric, where a is a Riemannian metric and β is a 1-form, We obtain a sufficient and necessary condition that F is locally projectively fiat if and only if α and β satisfy two special equations. Furthermore we give the non-trivial solutions for F to be locally projectively fiat. Moreover, we prove that such projectively fiat Finsler metrics with constant flag curvature must be locally Minkowskian.展开更多
Tumor markers have been of vital importance in cancer diagnosis, treatment and monitoring. However, the sensitivity of current tumor markers for early diagnosis is low, reducing the clinical usefulness of tumor marker...Tumor markers have been of vital importance in cancer diagnosis, treatment and monitoring. However, the sensitivity of current tumor markers for early diagnosis is low, reducing the clinical usefulness of tumor markers. Quantum dots are new fluorescent nanoparticles with unique photophysical and chemical properties, thus having a great potential impact on the investigation of cancer pathogenesis, early diagnosis, targeted therapy, prognosis and monitoring, when combined with tumor markers. The current research is focused on the detection of specific tumor markers or molecules based on tangible carriers such as ceils and tissues. One of the most promising clinical applications would be to explore the potential of this highly sensitive labeling technique for the detecting and imagining tumor markers in serum and other body fluids, where some progresses have already been made recently. How to detect early cancer based solely on invisible carders would be the next step of quantum dots bio-probes in clinical use, so as to develop a new detection technique with greater sensitivity, specificity, rapidity and availability.展开更多
Most important agricultural traits of crops are controlled by many genes. These traits have complicated genetic basis and are difficult for genetic analysis. Due to application of molecular marker techniques in the la...Most important agricultural traits of crops are controlled by many genes. These traits have complicated genetic basis and are difficult for genetic analysis. Due to application of molecular marker techniques in the last two decades, genetic and molecular dissection of quantitative traits has become possible. In this paper, recent progress on mapping of quantitative trait loci in crops was reviewed.展开更多
Genetic analysis of yield and yield components were carried out on three parental clones of Coffea canephora Pierre and their controlled hybrid progenies. There is a possibility to estimate coffee yield capabilities i...Genetic analysis of yield and yield components were carried out on three parental clones of Coffea canephora Pierre and their controlled hybrid progenies. There is a possibility to estimate coffee yield capabilities in simply via the easier measuring traits of yield components since significant correlation between them were detected. We found that among parental show very few significantly differences of all observed characters and even not found between the overall mean of the descendants and their donor parents, whereas some particular descendants show higher values rather than their donor parent in one or more characters. Increased value between the best parent to the best descendent were detected varies from zero to 102%. This situation suggests the difficulty to find out the optimum yield in a single plant by accumulating all of yield components that actually can increase 143% to 278% from actual to potential yields. In addition, observed characters among population were also actually found highly varies from 159% in out-turn in population B to 28,333% in number of productive branch among population A. Low heritability （h2） that generally found in quantitative traits due to polygenic control was present in our studies in almost all characters observed. Therefore, selection for actual high yielding through conventional breeding will not efficient, and more convincing the power of selection using molecular markers to assist for cumulate additive effects in a single genotypes that resulted of high yielding in the future.展开更多
The present review focused on selected, recent experimental progress of photodissociation dynamics of small molecules covering the vacuum ultraviolet (VUV) range from 6 eV to 20 eV. These advancements come about due t...The present review focused on selected, recent experimental progress of photodissociation dynamics of small molecules covering the vacuum ultraviolet (VUV) range from 6 eV to 20 eV. These advancements come about due to the available laser based VUV light sources along with the developments of advanced experimental techniques, including the velocitymap imaging (VMI), H-atom Rydberg tagging time-of-flight (HRTOF) techniques, as well as the two-color tunable VUV-VUV laser pump-probe detection method. The applications of these experimental techniques have allowed VUV photodissociation studies of many diatomic and triatomic molecules to quantum state-to-state in detail. To highlight the recent accomplishments, we have summarized the results on several important molecular species, including H2 (D2, HD), CO, N2, NO, O2, H2O (D2O, HOD), CO2, and N2O. The detailed VUV photodissociation studies of these molecules are of astrochemical and atmospheric relevance. Since molecular photodissociation initiated by VUV excitation is complex and is often governed by multiple electronic potential energy surfaces, the unraveling of the complex dissociation dynamics requires state-to-state cross section measurements. The newly constructed Dalian Coherent Light Source (DCLS), which is capable of generating coherent VUV radiation with unprecedented brightness in the range of 50-150 nm, promises to propel the photodissociation experiment to the next level.展开更多
In text classification, labeling documents is a tedious and costly task, as it would consume a lot of expert time. On the other hand, it usually is easier to obtain a lot of unlabeled documents, with the help of some ...In text classification, labeling documents is a tedious and costly task, as it would consume a lot of expert time. On the other hand, it usually is easier to obtain a lot of unlabeled documents, with the help of some tools like Digital Library, Crawler Programs, and Searching Engine. To learn text classifier from labeled and unlabeled examples, a novel fuzzy method is proposed. Firstly, a Seeded Fuzzy c-means Clustering algorithm is proposed to learn fuzzy clusters from a set of labeled and unlabeled examples. Secondly, based on the resulting fuzzy clusters, some examples with high confidence are selected to construct training data set. Finally, the constructed training data set is used to train Fuzzy Support Vector Machine, and get text classifier. Empirical results on two benchmark datasets indicate that, by incorporating unlabeled examples into learning process, the method performs significantly better than FSVM trained with a small number of labeled examples only. Also, the method proposed performs at least as well as the related method-EM with Nave Bayes. One advantage of the method proposed is that it does not rely on any parametric assumptions about the data as it is usually the case with generative methods widely used in semi-supervised learning.展开更多
Introgression with Saceharum spontaneum intended to broaden the genetic base of sugarcane resulted in an increase in desirable genes for broader adapt ability as well as undesirable genes for high starch content. Mark...Introgression with Saceharum spontaneum intended to broaden the genetic base of sugarcane resulted in an increase in desirable genes for broader adapt ability as well as undesirable genes for high starch content. Markers could provide a quick and efficient method of screening parental genotypes for low starch. The objectives of this study were to identify potential markers associated with starch in S. spontaneum population and evaluate their potential for screening for starch content. Data for starch content and （simple sequence repeats） SSR markers were collected from 51 S. spontaneum clones grown in replicated pots. The mixed procedure of statistical analysis system （SAS） was used to determine markers significantly associated with starch. Thirty-nine out of 357 polymorphic markers were significantly （P 〈 0.05） associated with starch content. Eighteen were positively associated and 21 were negatively associated. The presence of a positive marker produced 39% more starch than absence while the absence of a negative marker produced 57% more starch than presence. Selecting parents using negative markers may be more efficient than selecting using positive markers.展开更多
There are several software estimation models such as Line of Code, Function Point and COnstructive COst MOdel （COCOMO）. The original COCOMO model is one of the most widely practiced and popular among the software de...There are several software estimation models such as Line of Code, Function Point and COnstructive COst MOdel （COCOMO）. The original COCOMO model is one of the most widely practiced and popular among the software development community because of its flexible usage. It is a suite of models i.e., COnstructive Cost MOdel I and COnstructive Cost MOdel II. in this paper, we are evaluating the both models, to find out the level of efficiency they present and how they can be tailored to the needs of modem software development projects. We are applying COCOMO models on a case study of an e-commerce application that is built using Hyper Text Markup Language （HTML） and JavaScript. We will also shed light on the different components of each model, and how their Cost Drivers effect on the accuracy of cost estimations for software development projects.展开更多
文摘In order to identify the molecular markers that can be widely used in the breeding of Brassica napus L.varieties with high seed oil content under different genetic backgrounds,we developed a Kompetitive Allele Specific PCR(KASP)marker for seed oil content on the basis of the results from available studies.The verification in the F_(2) population showed that the marker was closely linked to the quantitative trait locus(QTL)for oil content on chromosome A05.The findings helped to breed the‘Fengyou’varieties with high seed oil content in the middle reaches of the Yangtze River.
基金Supported by Special Fund for Agro-scientific Research in the Public Interest of China(201303008)Science and Technology Plan Project of Guangdong Province(2012B020301006)Key Breeding Project for Special Maize of Department of Agriculture of Guangdong Province(B3071328)~~
文摘The crushing of leaves is the most time and effort-consuming part in DNA extraction which is a fundamental step in the study of molecular biology. In this study, a new rapid and batch-oriented crushing method for DNA extraction from maize leaves was developed. In addition, the practicability of the developed method in molecular marker-assisted breeding was verified using SSR molecular maker technology so as to provide a rapid, batch-oriented, low-cost and non-toxic leafcrushing method for a large number of molecular marker tests, improving test efficiency.
基金supported by the grants from Hi-Tech Research and Development Program of China("863"Program,No.2003AA222131,2003AA207020)the National Natural Science Foundation of China(No.30170570)Special Program for gene-transfering(No.JY03-B-07,JY03-A-07-02)
文摘Rice with low glutelin content is suitable as functional food for patients affected with diabetes and kidney failure. The fine mapping of the gene(s) responsible for low glutelin content will provide information regarding the distribution of glutelin related genes in rice genome and will generate markers for the selection of low glutelin rice varieties. Following an SDS-PAGE screen of rice germplasm from Taihu Valley of China, Japonica selection W3660 is identified to be a novel mutant characterized with low glutelin content. For fine mapping the mutant gene for low glutelin content, F2 and F3 populations were derived from a cross between W3660 and Jingrennuo. SDS-PAGE analysis of the total endosperm protein showed that the low glutelin content trait was controlled by a single dominant nuclear gene. Genetic mapping, using SSRs, located this gene to chromosome 2, in the region between SSR2-001/SSR2-004 and RM1358. The dis- tances of the two markers to the target gene were 1.1 cM and 3.8 cM respectively. By semi-quantitative RT-PCR analysis, the transcripts of GluB4/GluB5 genes located within the region do not change. However, GluB5 gene located proximal to SSR2-001/SSR2-004 was specifically reduced. SSR profiles of seven Japonica varieties were compared with that of W3660 for loci in the relevant genetic region. The markers SSR2-004 and RM1358 were used for marker- assisted selection. The selection efficiencies of SSR2-004 and RM1358 were 96.8% and 92.7% respectively. This provides a standard starting point for the breeding of low glutelin content rice varieties in China.
基金Funded by the National Natural Science Foundation of China (N0.40001019).
文摘This paper discusses and sums up the basic criterions of guaranteeing the labeling quality and abstracts the four basic factors including the conflict for a label with a label, overlay for label with the features, position’s priority and the association for a label with its feature. By establishing the scoring system, a formalized four-factors quality evaluation model is constructed. Last, this paper introduces the experimental result of the quality evaluation model applied to the automatic map labeling system-MapLabel.
基金Project (No. 10571154) supported by the National Natural Science Foundation of China
文摘In this work, we study a class of special Finsler metrics F called arctangent Finsler metric, which is a special （α, β）-metric, where a is a Riemannian metric and β is a 1-form, We obtain a sufficient and necessary condition that F is locally projectively fiat if and only if α and β satisfy two special equations. Furthermore we give the non-trivial solutions for F to be locally projectively fiat. Moreover, we prove that such projectively fiat Finsler metrics with constant flag curvature must be locally Minkowskian.
基金the grants from the New-Century Excellent Talents Sup-porting Program of the Ministry of Education of China (No. NCET-04-0669)the Foundation for the Author of National Excellent Doctoral Dis-sertation of China (No. 200464)+2 种基金the Wuhan Innovation Study Project (No. 20066002054)the Natural Science Foundation of China (No. 20675058)the Science Fund for Creative Research Groups (No. 20621502), NSFC.
文摘Tumor markers have been of vital importance in cancer diagnosis, treatment and monitoring. However, the sensitivity of current tumor markers for early diagnosis is low, reducing the clinical usefulness of tumor markers. Quantum dots are new fluorescent nanoparticles with unique photophysical and chemical properties, thus having a great potential impact on the investigation of cancer pathogenesis, early diagnosis, targeted therapy, prognosis and monitoring, when combined with tumor markers. The current research is focused on the detection of specific tumor markers or molecules based on tangible carriers such as ceils and tissues. One of the most promising clinical applications would be to explore the potential of this highly sensitive labeling technique for the detecting and imagining tumor markers in serum and other body fluids, where some progresses have already been made recently. How to detect early cancer based solely on invisible carders would be the next step of quantum dots bio-probes in clinical use, so as to develop a new detection technique with greater sensitivity, specificity, rapidity and availability.
文摘Most important agricultural traits of crops are controlled by many genes. These traits have complicated genetic basis and are difficult for genetic analysis. Due to application of molecular marker techniques in the last two decades, genetic and molecular dissection of quantitative traits has become possible. In this paper, recent progress on mapping of quantitative trait loci in crops was reviewed.
文摘Genetic analysis of yield and yield components were carried out on three parental clones of Coffea canephora Pierre and their controlled hybrid progenies. There is a possibility to estimate coffee yield capabilities in simply via the easier measuring traits of yield components since significant correlation between them were detected. We found that among parental show very few significantly differences of all observed characters and even not found between the overall mean of the descendants and their donor parents, whereas some particular descendants show higher values rather than their donor parent in one or more characters. Increased value between the best parent to the best descendent were detected varies from zero to 102%. This situation suggests the difficulty to find out the optimum yield in a single plant by accumulating all of yield components that actually can increase 143% to 278% from actual to potential yields. In addition, observed characters among population were also actually found highly varies from 159% in out-turn in population B to 28,333% in number of productive branch among population A. Low heritability （h2） that generally found in quantitative traits due to polygenic control was present in our studies in almost all characters observed. Therefore, selection for actual high yielding through conventional breeding will not efficient, and more convincing the power of selection using molecular markers to assist for cumulate additive effects in a single genotypes that resulted of high yielding in the future.
基金supported by the National Natural Science Foundation of China (No.21803072)the Program for Young Outstanding Scientists of Institute of Chemistry, Chinese Academy of Science (ICCAS)+2 种基金Beijing National Laboratory for Molecular Sciences (BNLMS)supported by the National Aeronautics and Space Administration Award #: 80NSSC18K0592National Science Foundation under CHE-1763319
文摘The present review focused on selected, recent experimental progress of photodissociation dynamics of small molecules covering the vacuum ultraviolet (VUV) range from 6 eV to 20 eV. These advancements come about due to the available laser based VUV light sources along with the developments of advanced experimental techniques, including the velocitymap imaging (VMI), H-atom Rydberg tagging time-of-flight (HRTOF) techniques, as well as the two-color tunable VUV-VUV laser pump-probe detection method. The applications of these experimental techniques have allowed VUV photodissociation studies of many diatomic and triatomic molecules to quantum state-to-state in detail. To highlight the recent accomplishments, we have summarized the results on several important molecular species, including H2 (D2, HD), CO, N2, NO, O2, H2O (D2O, HOD), CO2, and N2O. The detailed VUV photodissociation studies of these molecules are of astrochemical and atmospheric relevance. Since molecular photodissociation initiated by VUV excitation is complex and is often governed by multiple electronic potential energy surfaces, the unraveling of the complex dissociation dynamics requires state-to-state cross section measurements. The newly constructed Dalian Coherent Light Source (DCLS), which is capable of generating coherent VUV radiation with unprecedented brightness in the range of 50-150 nm, promises to propel the photodissociation experiment to the next level.
文摘In text classification, labeling documents is a tedious and costly task, as it would consume a lot of expert time. On the other hand, it usually is easier to obtain a lot of unlabeled documents, with the help of some tools like Digital Library, Crawler Programs, and Searching Engine. To learn text classifier from labeled and unlabeled examples, a novel fuzzy method is proposed. Firstly, a Seeded Fuzzy c-means Clustering algorithm is proposed to learn fuzzy clusters from a set of labeled and unlabeled examples. Secondly, based on the resulting fuzzy clusters, some examples with high confidence are selected to construct training data set. Finally, the constructed training data set is used to train Fuzzy Support Vector Machine, and get text classifier. Empirical results on two benchmark datasets indicate that, by incorporating unlabeled examples into learning process, the method performs significantly better than FSVM trained with a small number of labeled examples only. Also, the method proposed performs at least as well as the related method-EM with Nave Bayes. One advantage of the method proposed is that it does not rely on any parametric assumptions about the data as it is usually the case with generative methods widely used in semi-supervised learning.
文摘Introgression with Saceharum spontaneum intended to broaden the genetic base of sugarcane resulted in an increase in desirable genes for broader adapt ability as well as undesirable genes for high starch content. Markers could provide a quick and efficient method of screening parental genotypes for low starch. The objectives of this study were to identify potential markers associated with starch in S. spontaneum population and evaluate their potential for screening for starch content. Data for starch content and （simple sequence repeats） SSR markers were collected from 51 S. spontaneum clones grown in replicated pots. The mixed procedure of statistical analysis system （SAS） was used to determine markers significantly associated with starch. Thirty-nine out of 357 polymorphic markers were significantly （P 〈 0.05） associated with starch content. Eighteen were positively associated and 21 were negatively associated. The presence of a positive marker produced 39% more starch than absence while the absence of a negative marker produced 57% more starch than presence. Selecting parents using negative markers may be more efficient than selecting using positive markers.
文摘There are several software estimation models such as Line of Code, Function Point and COnstructive COst MOdel （COCOMO）. The original COCOMO model is one of the most widely practiced and popular among the software development community because of its flexible usage. It is a suite of models i.e., COnstructive Cost MOdel I and COnstructive Cost MOdel II. in this paper, we are evaluating the both models, to find out the level of efficiency they present and how they can be tailored to the needs of modem software development projects. We are applying COCOMO models on a case study of an e-commerce application that is built using Hyper Text Markup Language （HTML） and JavaScript. We will also shed light on the different components of each model, and how their Cost Drivers effect on the accuracy of cost estimations for software development projects.
