Activated nuclear factor-κB(NF-κB)plays an important role in the development of cardiovascular disease(CVD)through its regulated genes and microRNAs(miRNAs).However,the gene regulation profile remains unclear.In thi...Activated nuclear factor-κB(NF-κB)plays an important role in the development of cardiovascular disease(CVD)through its regulated genes and microRNAs(miRNAs).However,the gene regulation profile remains unclear.In this study,primary mouse vascular endothelial cells(pMVECs)were employed to detect CVD-related NF-κB-regulated genes and miRNAs.Genechip assay identified 77 NF-κB-regulated genes,including 45 upregulated and 32 downregulated genes,in tumor necrosis factorα(TNFα)-treated pMVECs.Ten of these genes were also found to be regulated by NF-κB in TNFα-treated He La cells.Quantitative real-time PCR(q RT-PCR)assay confirmed the upregulation of Egr1,Tnf,and Btg2 by NF-κB in the TNFα-treated p MVECs.The functional annotation revealed that many NF-κB-regulated genes identified in pMVECs were clustered into classical NF-κB-involved biological processes.Genechip assay also identified 26 NF-κB-regulated miRNAs,of which 21 were upregulated and 5 downregulated,in the TNFα-treated pMVECs.Further analysis showed that nine of the identified genes are regulated by seven of these mi RNAs.Finally,among the identified NF-κB-regulated genes and miRNAs,5 genes and 12 miRNAs were associated with CVD by miRWalk and genetic association database analysis.Taken together,these findings show an intricate gene regulation network raised by NF-κB in TNFα-treated p MVECs.The network provides new insights for understanding the molecular mechanism underlying the progression of CVD.展开更多
基金Project supported by the Natural Science Foundation of Guangdong Province(Nos.2017A030310606 and 2016A030307039)the Science and Technology Planning Project of Guangdong Province(Nos.2014A070713039 and 2016A030303063)+1 种基金the Science and Technology Planning Project of Chaozhou City(No.2016GY18)the National Natural Science Foundation of China(No.31770584)
文摘Activated nuclear factor-κB(NF-κB)plays an important role in the development of cardiovascular disease(CVD)through its regulated genes and microRNAs(miRNAs).However,the gene regulation profile remains unclear.In this study,primary mouse vascular endothelial cells(pMVECs)were employed to detect CVD-related NF-κB-regulated genes and miRNAs.Genechip assay identified 77 NF-κB-regulated genes,including 45 upregulated and 32 downregulated genes,in tumor necrosis factorα(TNFα)-treated pMVECs.Ten of these genes were also found to be regulated by NF-κB in TNFα-treated He La cells.Quantitative real-time PCR(q RT-PCR)assay confirmed the upregulation of Egr1,Tnf,and Btg2 by NF-κB in the TNFα-treated p MVECs.The functional annotation revealed that many NF-κB-regulated genes identified in pMVECs were clustered into classical NF-κB-involved biological processes.Genechip assay also identified 26 NF-κB-regulated miRNAs,of which 21 were upregulated and 5 downregulated,in the TNFα-treated pMVECs.Further analysis showed that nine of the identified genes are regulated by seven of these mi RNAs.Finally,among the identified NF-κB-regulated genes and miRNAs,5 genes and 12 miRNAs were associated with CVD by miRWalk and genetic association database analysis.Taken together,these findings show an intricate gene regulation network raised by NF-κB in TNFα-treated p MVECs.The network provides new insights for understanding the molecular mechanism underlying the progression of CVD.
