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3种柔鱼线粒体基因与核核糖体基因片段序列比较分析 被引量:2
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作者 刘连为 陈新军 +2 位作者 许强华 王从军 余为 《广东海洋大学学报》 CAS 2013年第6期24-29,共6页
为准确检测柔鱼(Ommαstrephesbartram川、茎柔鱼( Dosidicus gigas)与阿根廷滑柔鱼( IIIex argentinus ) 的种间遗传差异,对线粒体16SrRNA、细胞色素b(Cytb)与编码核糖体大亚基的基因(28SrDNA)片段序列进 行测定。经比对获... 为准确检测柔鱼(Ommαstrephesbartram川、茎柔鱼( Dosidicus gigas)与阿根廷滑柔鱼( IIIex argentinus ) 的种间遗传差异,对线粒体16SrRNA、细胞色素b(Cytb)与编码核糖体大亚基的基因(28SrDNA)片段序列进 行测定。经比对获得同源片段序列的长度分别为444、430、464坤,其中16SrRNA与28SrDNA基因片段上分别存在3处和47处碱基插入/缺失。核昔酸组成分析表明;3种柔鱼在3个基因片段上的核音酸组成差异不显著, 在线粒体2个基因片段上的A+T含量(16SrRNA;69.90%、72.01%、74.66%; Cytb; 63.61%、68.91%、71.65% ) 均明显高于C+C含量(16SrRNA;30.10%、27.99%、25.34%; Cytb; 36.39%、31.09%、28.35% ),而在28SrDNA 基因片段上的A+T含量(37.16%、36.74%、38.29% )明显低于C+C含量(62.84%、63.26%、61.71 %)0 3种柔鱼 在28SrDNA基因片段上检测到的核昔酸替代率最低,为6.68%,而蛋白质编码基因Cytb核昔酸替代率最高,为 20.93%,核营酸替代均发生在密码子第3位点上,而且未引起氨基酸替代。基于邻接法、最大简约法与最大似然 法重建的系统树显示,柔鱼与茎柔鱼的亲缘关系较近。根据C严b基因片段序列分析,柔鱼与茎柔鱼和阿根廷滑柔鱼的分歧时间分别为653-790万a和765 - 925万a,种间分化事件发生在中新世至上新世间。 展开更多
关键词 柔鱼 线粒体基因 核核糖体基因 序列分析 分歧时间
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植物核基因组核糖体基因间隔区序列的结构特点及其在系统发育研究中的应用 被引量:13
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作者 王川易 郭宝林 《武汉植物学研究》 CSCD 北大核心 2008年第4期417-423,共7页
目前,在植物系统发育研究中应用较多的核基因组的核糖体DNA基因间隔区序列主要有5S rDNA基因间隔区、内转录间隔区ITS和基因间间隔区IGS。虽然这些间隔区序列在长度、结构等方面各不相同,但都具有进化速率较快的特点,在植物属及属下分... 目前,在植物系统发育研究中应用较多的核基因组的核糖体DNA基因间隔区序列主要有5S rDNA基因间隔区、内转录间隔区ITS和基因间间隔区IGS。虽然这些间隔区序列在长度、结构等方面各不相同,但都具有进化速率较快的特点,在植物属及属下分类水平的系统发育关系研究中非常有用。本文重点就核基因组的5S rDNA基因间隔区以及IGS在植物中的特点以及各自在植物系统发育研究中的应用进行了综述。 展开更多
关键词 基因核糖体DNA 5S rDNA基因间隔区 IGS 系统发育
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Cloning and Expression of Curcin, a Ribosome-Inactivating Protein from the Seeds of Jatropha curcas 被引量:7
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作者 林娟 陈钰 +3 位作者 徐莺 颜钫 唐琳 陈放 《Acta Botanica Sinica》 CSCD 2003年第7期858-863,共6页
Curcin, a ribosome-inactivating protein with a molecular weight of about 28.2 kD, which strongly inhibits the protein synthesis in rabbit reticulocyte lysate system with an IC50 value of about (0.19 +/- 0.01) nmol/L, ... Curcin, a ribosome-inactivating protein with a molecular weight of about 28.2 kD, which strongly inhibits the protein synthesis in rabbit reticulocyte lysate system with an IC50 value of about (0.19 +/- 0.01) nmol/L, was purified from the seeds of Jatropha curcas L. The protein has the activity of rRNA N-glycosidase. Degenerate primers were designed based on the N-terminal partial sequence from purified curcin. The full-length curcin cDNA by RT-PCR and 5'-RACE was cloned. The deduced amino acids sequence indicates that a preprotein with 20 amino acid residues is first translated and then processed to a mature protein with 251 amino acids. The deduced amino acids sequence shares homology of 33% and 57% to those of type I ribosome-inactivating proteins (RIPs) and A chain of type II RIPs, respectively. The sequence encoding mature curcin was integrated into the pQE-30 vector for expression in Escherichia coli strain M15 (pREP4). The purified recombinant curcin was able to inhibit protein synthesis in rabbit reticulocyte lysate system. 展开更多
关键词 Jatropha curcas CURCIN RNA N-glycosidase CLONING in Escherichia coli expression
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PROTECTION AGAINST LEPTOSPIROSIS BY IMMU NIZATION WITH PLASMID DNA ENCODING 33 kDa ENDOFLAGELLIN OF L.INTERROGANS SEROVAR LAI 被引量:1
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作者 戴保民 游自立 +2 位作者 陈庄 阎和平 方之茂 《Chinese Medical Sciences Journal》 CAS CSCD 2000年第1期14-19,共6页
To evaluate how the efficacy of DNA inocutation affects the ability to raise protective immunity against Leptospira. [WT5”BX]Methods.[WT5”BZ] A pair of oligonucleotide primers were designed to amplify the endoflagel... To evaluate how the efficacy of DNA inocutation affects the ability to raise protective immunity against Leptospira. [WT5”BX]Methods.[WT5”BZ] A pair of oligonucleotide primers were designed to amplify the endoflagellar gene of L. interrogans sensu stricto serovar lai. An approximately 840bp fragment was generated with PCR and inserted into VR1012, a plasmid DNA expression vector, after the fragment and VR1012 were digested respectively with EcoRV and Sal I. A recombinant plasmid designated as VR1012+flaB2 was obtained. The vector, VR1012 consits of a pUC18 backbone with the cytomegalovirus(CMV) IE1 enhancer, promoter, and intron A, transcription regulatory elements and the BGH polyadenylation sequences driving the expressing of leptospiral endoflagellar gene of L. interrogans sensu stricto serovar lai. Plasmid encoding leptospiral endoflagellin gene was injected into quadriceps of NZW rabbits. [WT5”BX]Results.[WT5”BZ]This resulted in the generation of specific leptospiral antibody with high ELISA titer (1:32768) in the rabbits. Immuno/protection was performed in guinea pigs without adjuvant. The group“VR1012+flaB2” showed higher survival rate(90%,9/10 animals),compared with the group “VR1012 lack flaB2” and the group “normal saline”. [WT5”BX]Conclusion.[WT5”BZ]The technique of DNA vaccine has potential advantages over certain other vaccine preparation technologies. However whether DNA vaccine will be useful for vaccine development remains to be tested. 展开更多
关键词 LEPTOSPIRA endoflagellin DNA vaccine
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