Fungi blast is one of the most serious diseases of rice worldwide. Breeding resistant varieties have been proved to be the most effective and economical means to control the disease. This paper describes the molecular...Fungi blast is one of the most serious diseases of rice worldwide. Breeding resistant varieties have been proved to be the most effective and economical means to control the disease. This paper describes the molecular marker-assisted selection (MAS) procedure for a broad-spectrum blast resistant gene Pi1 integrated into an elite hybrid maintainer line, Zhenshan 97. A simple sequence repeat (SSR) based on molecular marker-aided selection system for Pi1 segment was established. Using a backcross population and a blast isolate F1829, Pi1 gene was mapped on the top of chromosome 11 between markers RZ536 and RM144, with a distance of 9.7 cM and 6.8 cM, respectively. Seventeen families derived from the recurrent parent Zhenshan 97 were obtained with homozygous Pi1 gene. The background of the 17 families was identified with inter simple sequence repeat (ISSR) amplification, the highest recovery of the Zhenshan 97 genetic background was 97.01% after the assay of 167 polymorphic bands.展开更多
In cultivated rice ( Oryza sativa L.), F-1 pollen sterility is controlled by at least 6 loci of the F, pollen sterility genes. To map S-b, one of loci, rice variety Taichung 65 (T65) carrying S-b(j)/S-b(j) and its nea...In cultivated rice ( Oryza sativa L.), F-1 pollen sterility is controlled by at least 6 loci of the F, pollen sterility genes. To map S-b, one of loci, rice variety Taichung 65 (T65) carrying S-b(j)/S-b(j) and its near-isogenic line TIST2 carrying S-b(i)/S-b(i) were used to develop the mapping population. One hundred and fifty-eight microsatellite markers were selected to survey T65 and TISL2. RM13 on chromosome 5 was found to be polymorphic between them. Cosegregation indicated that RM13 was closely linked with locus S-b. Eleven RFLP markers were selected on the corresponding region from the genetic map of Rice Genome Research Program (RGP) of Japan to convert into sequence-tagged site (STS) markers. Amplicon length polymorphism (ALP) was carried out, but none of them was found to be polymorphic between T65 and TISL2. Then PCR-based RFLP (PBR) was done using six 4-nucleotide recognizing restriction endonucleases. Polymorphism was detected when PCR products of R830STS and R2213SSTS were digested with Taq I. Genetic analysis indicated that the distance between locus S-b and markers, R830STS, RM13 and R2213SSTS were 3.3 cM (centi-Morgan), 5.2 cM and 5.5 cM, respectively. These PCR-based markers could be directly used in marker-assisted selection. The technical system combining genetic mapping and PCR-based marker-assisted selection will facilitate the development of molecular breeding.展开更多
Segmental duplications on rice (Oryza sativa L.) chromosomes 8, 9, 11, and 12 were studied by examining the distributions of sequences resolved by 13 probes detecting multiple copies of DNA sequences. Four of the hyb...Segmental duplications on rice (Oryza sativa L.) chromosomes 8, 9, 11, and 12 were studied by examining the distributions of sequences resolved by 13 probes detecting multiple copies of DNA sequences. Four of the hybridization bands detected by a repetitive sequence probe, rTRS, were mapped to the ends of all the four chromosomes. Two or three of the bands detected by each of the other 12 probes were also mapped to different chromosomes. The bands detected by the same probe usually occurred in similar locations of different chromosomes. Loci detected by different DNA probes were often similarly arranged on different chromosomes. Chromosomes 8 and 9 showed colinearity of marker loci arrangement indicating a possible common origin. A segment on chromosome 9 was also very similar to the previously reported duplicated fragments on the ends of chromosomes 11 and 12 which were also detected in this study, indicating a likely common origin. Moreover, the various degrees of distributional similarity of the segments suggest a complex relationship among the chromosomes in the evolution of the rice genome. These results support the proposition that chromosome duplication and diversification may be a mechanism for the origin and evolution of the chromosomes in the rice genome.展开更多
Comparative genetic studies have shown that there are widespread synteny and colinearity of the genes among different species within grass family. Rice ( Oryza sativa L.) is a model plant, and analysis of its genome a...Comparative genetic studies have shown that there are widespread synteny and colinearity of the genes among different species within grass family. Rice ( Oryza sativa L.) is a model plant, and analysis of its genome allows us to reveal the common features and the evolutionary rules of the gramineous genomes and accumulate the data for establishment of a common genetic system in the Poaceae. In this study, a rice gene Pib ( 10.3 kb), a map-based cloned gene, and RFLP markers linked with it are used as the tested probes to investigate their homology and physical location among the tested species. Southern blotting analysis showed that there were sequences homologous to Pib in maize genome. Further, Pib was localized onto the chromosomes of O. sativa ssp. indica cv. Guangluai 4, O. officinalis Wall ex Watt and the inbred line of Zea mays cv. Huangzao 4. The results of fluorescence in situ hybridization (FISH) and double-color FISH indicated that a synteny of Pib and RFLP markers linked with Pib existed among the genomes of the three tested species.展开更多
This paper proposed a novel fragile watermarking scheme based on singular value decomposition (SVD) and 2D chaotic mapping. It obtains chaotic initial values from the image blocks singular value decomposition and the ...This paper proposed a novel fragile watermarking scheme based on singular value decomposition (SVD) and 2D chaotic mapping. It obtains chaotic initial values from the image blocks singular value decomposition and the user’s key, then uses the chaotic mapping to get the chaotic sequence and inserts the sequence into the LSBs of the image blocks to get the watermarked image blocks. The paper reconstructed the watermarked image from all the embedded blocks. The analysis and experimental results show that the scheme is pretty fragile to tampering, and it can localize the tampering position accurately, reach 3×3 blocks.展开更多
An adaptive algorithm operating in the Contourlet domain is presented. Contourlet is a new image sparse representation, which is better than a wavelet for piecewise smooth images with smooth contours. Because of flexi...An adaptive algorithm operating in the Contourlet domain is presented. Contourlet is a new image sparse representation, which is better than a wavelet for piecewise smooth images with smooth contours. Because of flexible multiresolution, local and directional sensitivity of Contourlet transform, our approach also defines significant-tree in the Contourlet domain. By analyzing the relation of the Contourlet coefficients, we embed the watermarking into all the coefficients of each significant-tree. Then referring to the statistical properties of the coefficients, the masking characteristics of texture are defined for adaptively controlling the embedding strength. Experimental results show that the proposed algorithm is highly robust to various attacks, such as JPEG compression, medium filtering, cropping and rotation. Furthermore, comparisons with a classical method in the wavelet domain prove the validity of the new algorithm.展开更多
This paper propoes the water level measuring method based on the image, while the ruler used to indicate the water level is stained. The contamination of the ruler weakens or eliminates many features which are require...This paper propoes the water level measuring method based on the image, while the ruler used to indicate the water level is stained. The contamination of the ruler weakens or eliminates many features which are required for the image processing. However, the feature of the color difference between the ruler and the water surface are firmer on the environmental change compare to the other features. As the color differeaces are embossed, only the region of the ruler is limited to eliminate the noise, and the average image is produced by using several continuous frames. A histogram is then produced on the height axis of the produced intensity average image. Local peaks and local valleys are detected, and the section between the peak and valley which have the greatest change is looked for. The valley point at this very moment is used to detect the water level. The detected water level is then converted to the actual water level by using the mapping table. The proposed method is compared to the ultrasonic based method to evaluate its accuracy and efficiency on the various contaminated environments.展开更多
Helium, neon and argon isotope compositions of fluid inclusionshave been measured in hydrothermal sulfide samples from the TAG hydrothermal field at the Mid-Atlantic Ridge. Fluid-inclusion 3He/4He ratios are 2.2-13.3 ...Helium, neon and argon isotope compositions of fluid inclusionshave been measured in hydrothermal sulfide samples from the TAG hydrothermal field at the Mid-Atlantic Ridge. Fluid-inclusion 3He/4He ratios are 2.2-13.3 times the air value (Ra), and with a mean of 7.2 Ra. Com-parison with the local vent fluids (3He/4He=7.5-8.2 Ra) and mid-ocean ridge basalt values (3He/4He=6-11 Ra) shows that the variation range of 3He/4He ratios from sulfide-hosted fluid inclu-sions is significantly large. Values for 20Ne/22Ne are from 10.2 to 11.4, which are significantly higher than the atmospheric ratio (9.8). And fluid-inclusion 40Ar/36Ar ratios range from 287 to 359, which are close to the atmospheric values (295.5). These results indicate that the noble gases of fluid inclu-sions in hydrothermal sulfides are a mixture of mantle- and seawater-derived noble gases; the partial mantle-derived components of trapped hydrothermal fluids may be from the lower mantle; the helium of fluid inclusions is mainly from upper mantle; and the Ne and Ar components are mainly from seawater.展开更多
文摘Fungi blast is one of the most serious diseases of rice worldwide. Breeding resistant varieties have been proved to be the most effective and economical means to control the disease. This paper describes the molecular marker-assisted selection (MAS) procedure for a broad-spectrum blast resistant gene Pi1 integrated into an elite hybrid maintainer line, Zhenshan 97. A simple sequence repeat (SSR) based on molecular marker-aided selection system for Pi1 segment was established. Using a backcross population and a blast isolate F1829, Pi1 gene was mapped on the top of chromosome 11 between markers RZ536 and RM144, with a distance of 9.7 cM and 6.8 cM, respectively. Seventeen families derived from the recurrent parent Zhenshan 97 were obtained with homozygous Pi1 gene. The background of the 17 families was identified with inter simple sequence repeat (ISSR) amplification, the highest recovery of the Zhenshan 97 genetic background was 97.01% after the assay of 167 polymorphic bands.
文摘In cultivated rice ( Oryza sativa L.), F-1 pollen sterility is controlled by at least 6 loci of the F, pollen sterility genes. To map S-b, one of loci, rice variety Taichung 65 (T65) carrying S-b(j)/S-b(j) and its near-isogenic line TIST2 carrying S-b(i)/S-b(i) were used to develop the mapping population. One hundred and fifty-eight microsatellite markers were selected to survey T65 and TISL2. RM13 on chromosome 5 was found to be polymorphic between them. Cosegregation indicated that RM13 was closely linked with locus S-b. Eleven RFLP markers were selected on the corresponding region from the genetic map of Rice Genome Research Program (RGP) of Japan to convert into sequence-tagged site (STS) markers. Amplicon length polymorphism (ALP) was carried out, but none of them was found to be polymorphic between T65 and TISL2. Then PCR-based RFLP (PBR) was done using six 4-nucleotide recognizing restriction endonucleases. Polymorphism was detected when PCR products of R830STS and R2213SSTS were digested with Taq I. Genetic analysis indicated that the distance between locus S-b and markers, R830STS, RM13 and R2213SSTS were 3.3 cM (centi-Morgan), 5.2 cM and 5.5 cM, respectively. These PCR-based markers could be directly used in marker-assisted selection. The technical system combining genetic mapping and PCR-based marker-assisted selection will facilitate the development of molecular breeding.
文摘Segmental duplications on rice (Oryza sativa L.) chromosomes 8, 9, 11, and 12 were studied by examining the distributions of sequences resolved by 13 probes detecting multiple copies of DNA sequences. Four of the hybridization bands detected by a repetitive sequence probe, rTRS, were mapped to the ends of all the four chromosomes. Two or three of the bands detected by each of the other 12 probes were also mapped to different chromosomes. The bands detected by the same probe usually occurred in similar locations of different chromosomes. Loci detected by different DNA probes were often similarly arranged on different chromosomes. Chromosomes 8 and 9 showed colinearity of marker loci arrangement indicating a possible common origin. A segment on chromosome 9 was also very similar to the previously reported duplicated fragments on the ends of chromosomes 11 and 12 which were also detected in this study, indicating a likely common origin. Moreover, the various degrees of distributional similarity of the segments suggest a complex relationship among the chromosomes in the evolution of the rice genome. These results support the proposition that chromosome duplication and diversification may be a mechanism for the origin and evolution of the chromosomes in the rice genome.
文摘Comparative genetic studies have shown that there are widespread synteny and colinearity of the genes among different species within grass family. Rice ( Oryza sativa L.) is a model plant, and analysis of its genome allows us to reveal the common features and the evolutionary rules of the gramineous genomes and accumulate the data for establishment of a common genetic system in the Poaceae. In this study, a rice gene Pib ( 10.3 kb), a map-based cloned gene, and RFLP markers linked with it are used as the tested probes to investigate their homology and physical location among the tested species. Southern blotting analysis showed that there were sequences homologous to Pib in maize genome. Further, Pib was localized onto the chromosomes of O. sativa ssp. indica cv. Guangluai 4, O. officinalis Wall ex Watt and the inbred line of Zea mays cv. Huangzao 4. The results of fluorescence in situ hybridization (FISH) and double-color FISH indicated that a synteny of Pib and RFLP markers linked with Pib existed among the genomes of the three tested species.
文摘This paper proposed a novel fragile watermarking scheme based on singular value decomposition (SVD) and 2D chaotic mapping. It obtains chaotic initial values from the image blocks singular value decomposition and the user’s key, then uses the chaotic mapping to get the chaotic sequence and inserts the sequence into the LSBs of the image blocks to get the watermarked image blocks. The paper reconstructed the watermarked image from all the embedded blocks. The analysis and experimental results show that the scheme is pretty fragile to tampering, and it can localize the tampering position accurately, reach 3×3 blocks.
基金the National High Technology Research and Development Program of China(No.2003AA148040)the National Natural Science Foundation of China(No.10471151,60216263,6990312)
文摘An adaptive algorithm operating in the Contourlet domain is presented. Contourlet is a new image sparse representation, which is better than a wavelet for piecewise smooth images with smooth contours. Because of flexible multiresolution, local and directional sensitivity of Contourlet transform, our approach also defines significant-tree in the Contourlet domain. By analyzing the relation of the Contourlet coefficients, we embed the watermarking into all the coefficients of each significant-tree. Then referring to the statistical properties of the coefficients, the masking characteristics of texture are defined for adaptively controlling the embedding strength. Experimental results show that the proposed algorithm is highly robust to various attacks, such as JPEG compression, medium filtering, cropping and rotation. Furthermore, comparisons with a classical method in the wavelet domain prove the validity of the new algorithm.
基金supported by the Brain Korea 21 Project in 2010,the MKE(The Ministry of Knowledge Economy,Korea)the ITRC(Information Technology Research Center)support program(NIPA-2010-(C1090-1021-0010))
文摘This paper propoes the water level measuring method based on the image, while the ruler used to indicate the water level is stained. The contamination of the ruler weakens or eliminates many features which are required for the image processing. However, the feature of the color difference between the ruler and the water surface are firmer on the environmental change compare to the other features. As the color differeaces are embossed, only the region of the ruler is limited to eliminate the noise, and the average image is produced by using several continuous frames. A histogram is then produced on the height axis of the produced intensity average image. Local peaks and local valleys are detected, and the section between the peak and valley which have the greatest change is looked for. The valley point at this very moment is used to detect the water level. The detected water level is then converted to the actual water level by using the mapping table. The proposed method is compared to the ultrasonic based method to evaluate its accuracy and efficiency on the various contaminated environments.
基金The authors would like to thank Prof. Zhao Yiyang, Prof. Li Jincheng, Dr. Li Yanhe, Dr. Chu Feng-you for their critical review and constructive comments for improving the manuscript This work was financially supported in part by the Natural Science Fou
文摘Helium, neon and argon isotope compositions of fluid inclusionshave been measured in hydrothermal sulfide samples from the TAG hydrothermal field at the Mid-Atlantic Ridge. Fluid-inclusion 3He/4He ratios are 2.2-13.3 times the air value (Ra), and with a mean of 7.2 Ra. Com-parison with the local vent fluids (3He/4He=7.5-8.2 Ra) and mid-ocean ridge basalt values (3He/4He=6-11 Ra) shows that the variation range of 3He/4He ratios from sulfide-hosted fluid inclu-sions is significantly large. Values for 20Ne/22Ne are from 10.2 to 11.4, which are significantly higher than the atmospheric ratio (9.8). And fluid-inclusion 40Ar/36Ar ratios range from 287 to 359, which are close to the atmospheric values (295.5). These results indicate that the noble gases of fluid inclu-sions in hydrothermal sulfides are a mixture of mantle- and seawater-derived noble gases; the partial mantle-derived components of trapped hydrothermal fluids may be from the lower mantle; the helium of fluid inclusions is mainly from upper mantle; and the Ne and Ar components are mainly from seawater.