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大熊猫及其近种活化素基因β_A亚基成熟肽序列的克隆分析及其在分类地位上的应用 被引量:13
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作者 汪晓晶 王小行 +4 位作者 王亚军 王喜忠 何光昕 陈红卫 费立松 《Acta Genetica Sinica》 SCIE CAS CSCD 北大核心 2002年第9期782-786,共5页
借鉴互联网中已经克隆到的Activin基因 βA 亚基成熟肽序列 ,设计并合成 1对兼并引物 ,利用PCR技术从大熊猫、小熊猫、马来熊的基因组DNA中直接扩增目的基因片段 ,并分别克隆到大肠杆菌载体pBlueScript+ 当中 ,然后对培养产物进行序列... 借鉴互联网中已经克隆到的Activin基因 βA 亚基成熟肽序列 ,设计并合成 1对兼并引物 ,利用PCR技术从大熊猫、小熊猫、马来熊的基因组DNA中直接扩增目的基因片段 ,并分别克隆到大肠杆菌载体pBlueScript+ 当中 ,然后对培养产物进行序列测定。DNA序列分析表明 ,三种物种的Activin基因 βA 亚基成熟肽序列长度均为 35 9bp ,无内含子。基因片段编码一个含有 119个氨基酸残基的肽段。大熊猫、小熊猫、马来熊在该成熟肽核苷酸和氨基酸序列上表现出高度的同源性 ,其中核苷酸同源性为 93.9% ,氨基酸同源性高达 99%以上。此外 ,3种动物的核酸限制性酶切图谱也高度相似。与GenBank中收录的其他物种Activin基因 βA 亚基成熟肽序列相比较 ,显示此片段在处于不同进化程度的物种之间仍具有高度保守性。运用系统发育与进化树软件包PHILIP ,并结合克隆序列对大熊猫、小熊猫、马来熊进化与分类地位进行了探讨。采用不同的统计学分析方法 ,所得到的 3个物种系统发育进化树的拓扑结构完全一致。相比较而言 ,大熊猫与马来熊有着较近的亲缘关系 ,而小熊猫与上述两个物种的亲缘关系相对疏远。结果支持将大熊猫与马来熊归为熊科、而将小熊猫单列成科的学术观点。这是首次以生殖相关的核基因作为研究对象 。 展开更多
关键词 大熊猫 近种 活化素基因βA亚基成熟肽 克隆分析 分类地位 应用 序列分析 系统发育
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孔雀活化素基因(activin)β_A 亚基成熟肽序列的分子克隆及其对白孔雀起源与分类的佐证分析 被引量:6
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作者 邹方东 童芯锌 岳碧松 《遗传》 CAS CSCD 北大核心 2005年第2期231-235,共5页
参考已经克隆的活化素(activin)基因βA 亚基成熟肽序列,设计一对兼并引物,从绿孔雀(pavo muticus)、蓝孔雀(pavo cristatus)和白孔雀基因组中克隆到活化素基因βA 亚基成熟肽序列。测序结果表明,活化素基因βA 亚基成熟肽序列长345 bp... 参考已经克隆的活化素(activin)基因βA 亚基成熟肽序列,设计一对兼并引物,从绿孔雀(pavo muticus)、蓝孔雀(pavo cristatus)和白孔雀基因组中克隆到活化素基因βA 亚基成熟肽序列。测序结果表明,活化素基因βA 亚基成熟肽序列长345 bp,编码115个氨基酸。序列分析表明,蓝孔雀与绿孔雀核苷酸同源性为98.0%,而蓝孔雀与白孔雀核苷酸同源性为98.8%。NCBI搜索结果显示,活化素基因βA 亚基成熟肽序列在不同物种间都非常保守。氨基酸功能位点分析表明,活化素βA 亚基成熟肽可能在细胞信号传递过程中发挥了很重要的作用。另外,利用活化素基因βA 亚基成熟肽序列构建了3种孔雀的限制性酶切图谱及系统发生树。结果显示,白孔雀与蓝孔雀的亲源关系比与绿孔雀的亲源关系近。认为,白孔雀来源于蓝孔雀,很可能是蓝孔雀一个杂交后代或亚种,而不是人们通常所认为的仅仅是蓝孔雀的一个颜色突变体。 展开更多
关键词 孔雀 活化素基因 系统发生 分类
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利用CRISPR/Cas9技术构建ALK7^(LoxP/LoxP)小鼠品系
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作者 赵强 刘灯泉 +3 位作者 李毅辉 戴红艳 唐梦熊 管军 《中国动脉硬化杂志》 CAS 2019年第1期69-74,共6页
目的利用CRISPR/Cas9技术将LoxP序列靶向导入小鼠活化素受体样激酶7(ALK7)基因,构建ALK7LoxP/LoxP小鼠,与组织特异性Cre小鼠杂交,获得时空特异性ALK7基因敲除小鼠,为研究ALK7在特定时间特定组织中的功能奠定基础。方法利用CRISPR/Cas9... 目的利用CRISPR/Cas9技术将LoxP序列靶向导入小鼠活化素受体样激酶7(ALK7)基因,构建ALK7LoxP/LoxP小鼠,与组织特异性Cre小鼠杂交,获得时空特异性ALK7基因敲除小鼠,为研究ALK7在特定时间特定组织中的功能奠定基础。方法利用CRISPR/Cas9技术编辑小鼠ALK7基因:设计合成识别ALK7基因外显子4-6上下游非编码序列的sg RNA。设计并合成LoxP-ALK7-LoxP打靶载体,测序正确后,显微注射法将体外合成的sg RNA、Cas9 m RNA和打靶载体注射到小鼠受精卵,移植受精卵至假孕小鼠输卵管代孕。获得仔鼠后通过PCR、Southern blot鉴定子代小鼠基因型,实时荧光定量PCR、Western blot检测ALK7转录表达水平。结果获得了含有目的基因的打靶阳性小鼠,并且插入的LoxP序列不影响ALK7的转录表达水平。结论利用CRISPR/Cas9技术成功将LoxP序列靶向引入小鼠ALK7基因,成功构建ALK7LoxP/LoxP小鼠品系,为进一步构建组织特异性ALK7基因敲除小鼠模型奠定了基础。 展开更多
关键词 CRISPR/Cas9 活化素受体样激酶7基因 LoxP序列 组织特异性敲除
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Significant roles of anti-aging protein klotho and fibroblast growth factor23 in cardiovascular disease 被引量:9
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作者 Hong-Ying DING Hou-Xun MA 《Journal of Geriatric Cardiology》 SCIE CAS CSCD 2015年第4期439-447,共9页
The klotho gene has been identified as an aging suppressor that encodes a protein involved in cardiovascular disease (CVD). The inac- tivation of the klotho gene causes serious systemic disorders resembling human ag... The klotho gene has been identified as an aging suppressor that encodes a protein involved in cardiovascular disease (CVD). The inac- tivation of the klotho gene causes serious systemic disorders resembling human aging, such as atherosderosis, diffuse vascular calcification and shortened life span. Klotho has been demonstrated to ameliorate vascular endothelial dysfunction and delay vascular calcification. Fur- thermore, klotho gene polymorphisms in the human are associated with various cardiovascular events. Recent experiments show that klotho may reduce transient receptor potential canonical6 (TRPC6) channels, resulting in protecting the heart from hypertrophy and systolic dys- function. Fibroblast growth factor23 (FGF23) is a bone-derived hormone that plays an important role in the regulation of phosphate and vi- tamin D metabolism. FGF23 accelerates urinary phosphate excretion and suppresses 1,25-dihydroxy vitaminD3 (1,25(OH)2D3)synthesis in the presence ofFGF receptorl (FGFR1) and its co-receptor ldotho, principally in the kidney. The hormonal affects of circulating klotho pro- tein and FGF23 on vascular and heart have contributed to an understanding of their roles in the pathophysiology of arterial stiffness and left ventricular hypertrophy. Klotho and FGF23 appear to play a critical role in the pathogenesis of vascular disease, and may represent a novel potential therapeutic strategy for clinical intervention. 展开更多
关键词 Cardiac hypertrophy CARDIOVASCULAR Fibroblast growth factor23 Gene polymorphisms KLOTHO Vascular calcification
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Comparative transcriptomic insights into the mechanisms of electron transfer in Geobacter co-cultures with activated carbon and magnetite 被引量:2
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作者 Shiling Zheng Fanghua Liu +2 位作者 Meng Li Leilei Xiao Oumei Wang 《Science China(Life Sciences)》 SCIE CAS CSCD 2018年第7期787-798,共12页
Both activated carbon and magnetite have been reported to promote the syntrophic growth of Geobacter metallireducens and Geobacter sulfurreducens co-cultures, the first model to show direct interspecies electron trans... Both activated carbon and magnetite have been reported to promote the syntrophic growth of Geobacter metallireducens and Geobacter sulfurreducens co-cultures, the first model to show direct interspecies electron transfer (DIET); however, differential transcriptomics of the promotion on co-cultures with these two conductive materials are unknown. Here, the comparative transcriptomic analysis of G. metallireducens and G. sulfurreducens co-cultures with granular activated carbon (GAC) and magnetite was reported. More than 2.6-fold reduced transcript abundances were determined for the uptake hydrogenase genes of G. sulfurreducens as well as other hydrogenases in those co-cultures to which conductive materials had been added. This is consistent with electron transfer in G. metallireducens-G. sulfurreducens co-cultures as evinced by direct interspecies electron transfer (DIET). Transcript abundance for the structural component of electrically conductive pili (e-pili), PilA, was 2.2-fold higher in G. metallireducens, and, in contrast, was 14.9-fold lower in G. sulfurreducens in co-cultures with GAC than in Geobacters co-cultures without GAC. However, it was 9.3-fold higher in G. sulfurreducens in co-cultures with magnetite than in Geobacters co-cultures. Mutation results showed that GAC can be substituted for the e-pili of both strains but magnetite can only compensate for that of G. sulfurreducens, indicating that the e-pili is a more important electron acceptor for the electron donor strain of G. metallireducens than for G. sulfurreducens. Transcript abundance for G. metallireducens c-type cytochrome gene GMET_RS14535, a homologue to c-type cytochrome gene omcE of G. sulfurreducens was 9.8-fold lower in co-cultures with GAC addition, while that for OmcS of G. sulfurreducens was 25.1-fold higher in co-cultures with magnetite, than in that without magnetite. Gene deletion studies showed that neither GAC nor magnetite can completely substitute the cytochrome (OmcE homologous) of G. metallireducens but compensate for the cytochrome (OmcS) of G. sulfurreducens. Moreover, some genes associated with central metabolism were up-regulated in the presence of both GAC and magnetite; however, tricarboxylic acid cycle gene transcripts in G. sulfurreducens were not highly-expressed in each of these amended co-cultures, suggesting that there was considerable redundancy in the pathways utilised by G. sulfurreducens for electron transfer to reduce fumarate with the amendment of GAC or magnetite. These results support the DIET model of G. metallireducens and G. sulfurreducens and suggest that e-pili and cytochromes of the electron donor strain are more important than that of the electron acceptor strain, indicating that comparative transcriptomics may be a promising route by which to reveal different responses of electron donor and acceptor during DIET in co-cultures. 展开更多
关键词 comparative transcriptomics GEOBACTER direct interspecies electron transfer(DIET) activated carbon MAGNETITE
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