Common carp expressed sequence tags （ESTs） were analyzed for the existence of microsatellites, or simple sequence repeats （SSRs）. In the NCBI dbEST database, a total of 10612 sequences were registered before Decem...Common carp expressed sequence tags （ESTs） were analyzed for the existence of microsatellites, or simple sequence repeats （SSRs）. In the NCBI dbEST database, a total of 10612 sequences were registered before December 31, 2004. A complete search of 2-6 nucleotide microsatellites resulted in the identification of 513 SSR-containing ESTs, accounting for 4.8% of the total. Cluster analysis indicated that 73 sequences of SSR-containing ESTs fell into 27 groups and the remaining 440 ESTs were independent. A total of 467 unique SSR-containing ESTs were identified. These EST-SSRs contained a vari- ety of simple sequence types, and di- and tri-nucleotide repeats were the most abundant, accounting for 42.1% and 27.9% of the whole, respectively. Of the dinucleotide repeats, CA/TG was the most abundant, followed by GA/TC. BLASTx search showed that 38.1% of the SSR loci could be associated with genes or proteins of known or unknown function. BLASTx searches of SSR-containing ESTs also showed high frequencies （98/179） of hits on zebrafish sequences.展开更多
The aim of this study is to report the length-weight relationship parameters （a and b） for some economically important fish species from Iranian freshwaters. The length-weight relationships （LWR） are calculated fo...The aim of this study is to report the length-weight relationship parameters （a and b） for some economically important fish species from Iranian freshwaters. The length-weight relationships （LWR） are calculated for six freshwater fish species collected during 2006 and 2007 in Iran. The values of the exponent b in the LWR （W=aL^b） vary between 2.985 and 3.543. The LWR with high correlation coefficient （r^2） is significant for all the species. These parameters axe of great importance to evaluate the relative condition of populations, biology, species management and their fisheries and stock assessment. The application of the length-weight relationships presented here should be limited to the observed length ranges.展开更多
文摘Common carp expressed sequence tags （ESTs） were analyzed for the existence of microsatellites, or simple sequence repeats （SSRs）. In the NCBI dbEST database, a total of 10612 sequences were registered before December 31, 2004. A complete search of 2-6 nucleotide microsatellites resulted in the identification of 513 SSR-containing ESTs, accounting for 4.8% of the total. Cluster analysis indicated that 73 sequences of SSR-containing ESTs fell into 27 groups and the remaining 440 ESTs were independent. A total of 467 unique SSR-containing ESTs were identified. These EST-SSRs contained a vari- ety of simple sequence types, and di- and tri-nucleotide repeats were the most abundant, accounting for 42.1% and 27.9% of the whole, respectively. Of the dinucleotide repeats, CA/TG was the most abundant, followed by GA/TC. BLASTx search showed that 38.1% of the SSR loci could be associated with genes or proteins of known or unknown function. BLASTx searches of SSR-containing ESTs also showed high frequencies （98/179） of hits on zebrafish sequences.
文摘The aim of this study is to report the length-weight relationship parameters （a and b） for some economically important fish species from Iranian freshwaters. The length-weight relationships （LWR） are calculated for six freshwater fish species collected during 2006 and 2007 in Iran. The values of the exponent b in the LWR （W=aL^b） vary between 2.985 and 3.543. The LWR with high correlation coefficient （r^2） is significant for all the species. These parameters axe of great importance to evaluate the relative condition of populations, biology, species management and their fisheries and stock assessment. The application of the length-weight relationships presented here should be limited to the observed length ranges.
