AIM:To globally compare the gene expression profiles during the capillary morphogenesis of human microvascular endothelial cells (HMVECs) in an in vitro angiogeness system with affymetrix oligonucleotide array. METHOD...AIM:To globally compare the gene expression profiles during the capillary morphogenesis of human microvascular endothelial cells (HMVECs) in an in vitro angiogeness system with affymetrix oligonucleotide array. METHODS: A microcarrier-based in vitro angiogenesis system was developed, in which ECs migrated into the matrix, proliferated, and formed capillary sprouts. The sprouts elongated, branched and formed networks. The total RNA samples from the HMVECs at the selected time points (0.5, 24, and 72 h) during the capillary morphogenesis were used for microarray analyses, and the data were processed with the softwares provided by the manufacturers. The expression patterns of some genes were validated and confirmed by semi-quantitative RT-PCR. The regulated genes were grouped based on their molecular functions and expression patterns, and among them the expression of chemokines and chemokine receptors was specially examined and their functional implications were analyzed. RESULTS: A total of 1 961 genes were up- or downreg-ulated two-folds or above, and among them, 468 genes were up- or down-regulated three-folds or above. The regulated genes could be grouped into categories based on their molecular functions, and were also clustered into six groups based on their patterns of expression. As for chemokines and chemokine receptors, CXCL1/GRO-α, CXCL2/GRO-β, CXCL5/ENA-78, CXCL6/GCP2, IL-8/CXCL8, CXCL12/SDF-1, CXCL9/Mig, CXC11/ITAC, OOCL1/fractalkine, CCL2/MCP-1, CCL3, CCL5/RANTES, CCL7, CCL15, CCL21, CCL23, CCL28, and CCR1, CCR9, CXCR4 were identified. Moreover, these genes demonstrated different changing patterns during the capillary morphogenesis, which implied that they might have different roles in the sequential process. Among the chemokines identified, CCL2/MCP-1, CCL5/RANTES and CX3CL1 were specially up-regulated at the 24-h time point when the sprouting characterized the morphological change. It was thus suggested that they might exert crucial roles at the early stage of angiogenesis. CONCLUSION: The present study demonstrates a global profile of gene expression during endothelial capillary morphogenesis, and the results provide us much information about the molecular mechanisms of angiogenesis, with which further evaluation of individual genes can be conducted.展开更多
In this paper, we study a fluctuating potential barrier system with correlated spatial noises. Study shows that for this system, there is the resonant activation over the fluctuating potential barrier, and that the co...In this paper, we study a fluctuating potential barrier system with correlated spatial noises. Study shows that for this system, there is the resonant activation over the fluctuating potential barrier, and that the correlation between the different spatial noises can enhance (or weaken) the resonant activation.展开更多
The activation coefficient equations in the"activation criterion of pre-existing weakness"are relatively complex and not easy to apply to specific applications.The relative activity of pre-existing weaknesse...The activation coefficient equations in the"activation criterion of pre-existing weakness"are relatively complex and not easy to apply to specific applications.The relative activity of pre-existing weaknesses is often critical in geological analysis.The Mohr circle can be used only in two-dimensional stress analysis.By applying the"activation criterion of pre-existing weakness"and combining it with numerical analysis,we establish the correspondence between the pole(n,n)of a pre-existing weakness plane and its orientation in"Mohr space".As a result,the normal stress(n)and shear stress(n)of a pre-existing weakness plane can be readily expressed in Mohr space.Furthermore,we introduce the method and procedures for predicting the activation and relative activation of pre-existing weaknesses in Mohr space.Finally,we apply the Mohr space method and compare the predictions to sandbox modeling results and 3D seismic data.The results show that Mohr space can be used in stress analysis to estimate the activation of a pre-existing weakness in any triaxial stress state.展开更多
文摘AIM:To globally compare the gene expression profiles during the capillary morphogenesis of human microvascular endothelial cells (HMVECs) in an in vitro angiogeness system with affymetrix oligonucleotide array. METHODS: A microcarrier-based in vitro angiogenesis system was developed, in which ECs migrated into the matrix, proliferated, and formed capillary sprouts. The sprouts elongated, branched and formed networks. The total RNA samples from the HMVECs at the selected time points (0.5, 24, and 72 h) during the capillary morphogenesis were used for microarray analyses, and the data were processed with the softwares provided by the manufacturers. The expression patterns of some genes were validated and confirmed by semi-quantitative RT-PCR. The regulated genes were grouped based on their molecular functions and expression patterns, and among them the expression of chemokines and chemokine receptors was specially examined and their functional implications were analyzed. RESULTS: A total of 1 961 genes were up- or downreg-ulated two-folds or above, and among them, 468 genes were up- or down-regulated three-folds or above. The regulated genes could be grouped into categories based on their molecular functions, and were also clustered into six groups based on their patterns of expression. As for chemokines and chemokine receptors, CXCL1/GRO-α, CXCL2/GRO-β, CXCL5/ENA-78, CXCL6/GCP2, IL-8/CXCL8, CXCL12/SDF-1, CXCL9/Mig, CXC11/ITAC, OOCL1/fractalkine, CCL2/MCP-1, CCL3, CCL5/RANTES, CCL7, CCL15, CCL21, CCL23, CCL28, and CCR1, CCR9, CXCR4 were identified. Moreover, these genes demonstrated different changing patterns during the capillary morphogenesis, which implied that they might have different roles in the sequential process. Among the chemokines identified, CCL2/MCP-1, CCL5/RANTES and CX3CL1 were specially up-regulated at the 24-h time point when the sprouting characterized the morphological change. It was thus suggested that they might exert crucial roles at the early stage of angiogenesis. CONCLUSION: The present study demonstrates a global profile of gene expression during endothelial capillary morphogenesis, and the results provide us much information about the molecular mechanisms of angiogenesis, with which further evaluation of individual genes can be conducted.
文摘In this paper, we study a fluctuating potential barrier system with correlated spatial noises. Study shows that for this system, there is the resonant activation over the fluctuating potential barrier, and that the correlation between the different spatial noises can enhance (or weaken) the resonant activation.
基金supported by the China Major National Science & Technology Program of Oil and Gas (Grant Nos. 2011ZX05023-004-012, 2011ZX05006-006-02-01)the National Natural Science Foundation of China (Grant Nos. 41272160, 40772086)
文摘The activation coefficient equations in the"activation criterion of pre-existing weakness"are relatively complex and not easy to apply to specific applications.The relative activity of pre-existing weaknesses is often critical in geological analysis.The Mohr circle can be used only in two-dimensional stress analysis.By applying the"activation criterion of pre-existing weakness"and combining it with numerical analysis,we establish the correspondence between the pole(n,n)of a pre-existing weakness plane and its orientation in"Mohr space".As a result,the normal stress(n)and shear stress(n)of a pre-existing weakness plane can be readily expressed in Mohr space.Furthermore,we introduce the method and procedures for predicting the activation and relative activation of pre-existing weaknesses in Mohr space.Finally,we apply the Mohr space method and compare the predictions to sandbox modeling results and 3D seismic data.The results show that Mohr space can be used in stress analysis to estimate the activation of a pre-existing weakness in any triaxial stress state.
