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具有癌变潜能胃炎的炎性细胞表型特征及其差异表达基因富集通路分析 被引量:3
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作者 李一芷 燕丽容 +1 位作者 袁媛 徐倩 《胃肠病学》 2020年第8期472-477,共6页
背景:胃癌,特别是肠型胃癌是由非萎缩性胃炎-萎缩性胃炎-异型增生-癌变的过程发展而来。目的:探讨易于癌变的胃炎(萎缩性胃炎)和不易于癌变的胃炎(非萎缩性胃炎)的炎性细胞表型特征及其差异表达基因富集的通路。方法:从GEO数据库中下载G... 背景:胃癌,特别是肠型胃癌是由非萎缩性胃炎-萎缩性胃炎-异型增生-癌变的过程发展而来。目的:探讨易于癌变的胃炎(萎缩性胃炎)和不易于癌变的胃炎(非萎缩性胃炎)的炎性细胞表型特征及其差异表达基因富集的通路。方法:从GEO数据库中下载GSE2669、GSE83389、GSE106656和GSE27411数据集,采用R语言筛选差异表达基因,并采用GSE116312数据集进行验证。三个“非萎缩性胃炎-萎缩性胃炎”数据集筛选出的差异表达基因与炎性细胞表型特征基因取交集,筛选出的差异表达基因行REACTOME和KEGG分析。结果:在“正常胃黏膜-非萎缩性胃炎-萎缩性胃炎”的疾病动态链中,筛选出多种差异表达基因,以GSE116312数据验证后得到5个共同差异表达基因。3个数据集共筛选出85个炎性细胞表型特征基因,在“正常胃黏膜-非萎缩性胃炎”疾病链中中性粒细胞比例较高,在“非萎缩性胃炎-萎缩性胃炎”疾病链中为成纤维细胞和巨噬细胞。REACTOME和KEGG分析发现,“非萎缩性胃炎-萎缩性胃炎”疾病链中,差异表达基因富集于IL-10、IL-4和IL-13信号通路以及抗原处理与呈递信号通路。结论:具有癌变潜能胃炎的炎性细胞表型特征多为巨噬细胞、中性粒细胞和成纤维细胞,多富集于IL信号通路以及抗原处理与呈递信号通路。 展开更多
关键词 胃炎 非萎缩性 胃炎 萎缩性 癌变 炎性细胞表型 生物信息学
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Development of HBsAg-Binding Aptamers that bind HepG2.2.15 cells via HBV surface antigen 被引量:6
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作者 Jia LIU Yan YANG +6 位作者 Bin HU Zhi-yong MA Hong-ping HUANG Yuan YU Shen-pei LIU Meng-ji LU Dong-liang YANG 《Virologica Sinica》 SCIE CAS CSCD 2010年第1期27-35,共9页
Hepatitis B virus surface antigen (HBsAg), a specific antigen on the membrane of Hepatitis B virus (HBV)-infected cells, provides a perfect target for therapeutic drugs. The development of reagents with high affin... Hepatitis B virus surface antigen (HBsAg), a specific antigen on the membrane of Hepatitis B virus (HBV)-infected cells, provides a perfect target for therapeutic drugs. The development of reagents with high affinity and specificity to the HBsAg is of great significance to the early-stage diagnosis and treatment of HBV infection. Herein, we report the selection of RNA aptamers that can specifically bind to HBsAg protein and HBsAg-positive hepatocytes. One high affinity aptamer, HBs-A22, was isolated from an initial 115 met library of -1.1 ×10^15 random-sequence RNA molecules using the SELEX procedure. The selected aptamer HBs-A22 bound specifically to hepatoma cell line HepG2.2.15 that expresses HBsAg but did not bind to HBsAg-devoid HepG2 cells. This is the first reported RNA aptamer which could bind to a HBV specific antigen. This newly isolated aptamer could be modified to deliver imaging, diagnostic, and therapeutic agents targeted at HBV-infected cells. 展开更多
关键词 Aptamer Systematic evolution of ligands by exponential enrichment (SELEX) Hepatitis B virus (HBV) HBSAG HEPATOCYTES
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Effects of the Overall Alkaloid of a Traditional Chinese Medicine “Tongbiling” on the Cytokine Expression in Th1 and Th2 Cells of Rheumatoid Arthritis and Their Signaling Pathway 被引量:1
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作者 陈光星 刘清平 +3 位作者 王培训 曾耀英 刘良 陈纪藩 《Journal of Microbiology and Immunology》 2004年第1期45-49,共5页
To investigate the effects of overall alkali of a traditional Chinese medicine “Tongbiling” (brucine and strychnine alkaloids in main) on the cytokines expression in Th1 and Th2 cells in the synovial fluid of patien... To investigate the effects of overall alkali of a traditional Chinese medicine “Tongbiling” (brucine and strychnine alkaloids in main) on the cytokines expression in Th1 and Th2 cells in the synovial fluid of patients with rheumatism arthritis and their signal pathway, the mononuclear cells in the synovial fluid (SFMC) of patients were isolated by Ficoll-Hypaque gradient centrifugation, and the CD3 + CD69 + and CD3 + HLA-DR antigen were analyzed by flow cytometry in comparison with those of the peripheral blood. The rest of cells were cultured after resuspension with RPMI 1640 culture medium. Phorbol 12,13-dibutyrate (PDB) and ionomycin were added successively into the culture with various concentration of overall alkali Tongbiling (TBL). After 4 h of cultivation, the expression of IFN-γ and IL-4 in CD3 + cells were analyzed by flow cytometry. The influence of overall alkali TBL (100?mg/L) on the intracellular calcium was investigated after Fluo-3/AM labeling and stimulation with PDB and ionomycin at 1, 2, 4 and 10?min, and the influence of TBL on the expression of CD3 + CD69 + cells were determined with stimulation of PDB for 24?h in the whole blood lymphocytes culture. It was found that the percentage of T cells bearing CD69 was significantly up-regulated (77%), while that of T cells bearing HLA-DR was 44% in the synovial mononucleated cells. After PDB and ionomycin stimulation, the expression of IFN-γ in CD3 + cells were up-regulated, but there was no change on the expression of IL-4 in CD3 + cells, indicating that ratio of Th1/Th2 was significantly increased and Th cells differentiate to Th1 cells in mainly. Four concentrations of overall alkaloid of TBL (200?mg/L, 100?mg/L, 50?mg/L, 25?mg/L) could down-regulated the expression of IFN-γ in CD3 + cells and the Th1/Th2 ratio obviously, but all the concentrations of the overall alkaloids had no effect on the expression of IL-4 in CD3 + cells. 100?mg/L concentration of the overall alkaloid did not down-regulate the intracellular calcium level. Each concentration of the overall alkaloid could down-regulated the expression CD69 obviously on the PDB-activated mouse T cells. It concluded from the above observations that the overall alkaloid of TBL could relieve the inflammatory and immune damages by suppressing the expression of Th1 type cytokines and Th1 cell differentiation, regulating the imbalance of Th1/Th2 cells and inhibiting the early activation of the T lymphocytes bearing CD69. There was no remarkable influence on the intracellular calcium signaling transduction pathway. The inhibitory effected on T cells to express IFN-γ might be due to the suppression of PKC-MAPK signaling pathway. From the standpoint of traditional Chinese medicine, this might be due to the regulation of “Yin” and “Yang” imbalance of joints to modify the pathological status in rheumatoid arthritis. This study provided an experimental basis for the application of overall alkaloids of TBL in the treatment of rheumatoid arthritis. 展开更多
关键词 Overall alkaloid TBL T lymphocytes Th1/Th2 cells HLA-DR
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